MS023840 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACGACGCCGCTTCGCAGCAGCTTGTAGCTGATCCCTCCCAACTCCAGATTACTTGGCAAATAGCCGTCGGCGCCATTGGTAAAATCGCCAATCTTCCAATTCAATACTCTCTATTGCTTTTGTTTTCATTTTGTATCCTATATATGTTGCAGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTCACCAAGAGAATTGTGAGTTTACCAATTCCAAATTGCAAACAAAATTCCGCATTAACTAACAAATTAGAACATCTAGGAAACTCGAAAAGCTTCAGGTCGATAGAGATATTGTTGTTAAGTATCTCACGATACAGATAAAAGTGGATTTCCTTTCGTTACTAATTGGTTTGAGGTACAACTTTTAATATGATATTCGAACCAAAAAATAAGGTCCAACCAAAATCGATGAAGTTGAAGAATCATGATCTTAAGTGGGCAGGTGGCACAGCAAAGATGTGAAGAATGTGGAGGTTCGGGGCTTGTTCTTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTATTAATAGTGACTTTCGAGTATTTAGGGATGATTTTTTACGTCAAAAGTTGCCTTGGTTTTTTACATTTGTGAGTTTTGGGCAGGTGGGTTTTTGCCTTGGCAGTCATGGAAGCGATTCTTTTGGGGC AATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACGACGCCGCTTCGCAGCAGCTTGTAGCTGATCCCTCCCAACTCCAGATTACTTGGCAAATAGCCGTCGGCGCCATTGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTCACCAAGAGAATTGTGGCACAGCAAAGATGTGAAGAATGTGGAGGTTCGGGGCTTGTTCTTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTGGGTTTTTGCCTTGGCAGTCATGGAAGCGATTCTTTTGGGGC AATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACGACGCCGCTTCGCAGCAGCTTGTAGCTGATCCCTCCCAACTCCAGATTACTTGGCAAATAGCCGTCGGCGCCATTGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTCACCAAGAGAATTGTGGCACAGCAAAGATGTGAAGAATGTGGAGGTTCGGGGCTTGTTCTTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTGGGTTTTTGCCTTGGCAGTCATGGAAGCGATTCTTTTGGGGC NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG Homology
BLAST of MS023840 vs. NCBI nr
Match: XP_022154992.1 (uncharacterized protein LOC111022135 [Momordica charantia]) HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48 Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of MS023840 vs. NCBI nr
Match: XP_038903334.1 (uncharacterized protein LOC120089955 [Benincasa hispida]) HSP 1 Score: 159.1 bits (401), Expect = 2.0e-35 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of MS023840 vs. NCBI nr
Match: XP_023005598.1 (uncharacterized protein LOC111498537 [Cucurbita maxima] >XP_023005599.1 uncharacterized protein LOC111498537 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0
BLAST of MS023840 vs. NCBI nr
Match: XP_008449071.1 (PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of MS023840 vs. NCBI nr
Match: XP_022935718.1 (uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022936477.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937262.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937933.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022938581.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_023540549.1 uncharacterized protein LOC111800877 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0
BLAST of MS023840 vs. ExPASy TrEMBL
Match: A0A6J1DN65 (uncharacterized protein LOC111022135 OS=Momordica charantia OX=3673 GN=LOC111022135 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 5.9e-49 Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of MS023840 vs. ExPASy TrEMBL
Match: A0A6J1L2M2 (uncharacterized protein LOC111498537 OS=Cucurbita maxima OX=3661 GN=LOC111498537 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0
BLAST of MS023840 vs. ExPASy TrEMBL
Match: A0A6J1FBA7 (uncharacterized protein LOC111442262 OS=Cucurbita moschata OX=3662 GN=LOC111442262 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0
BLAST of MS023840 vs. ExPASy TrEMBL
Match: A0A1S3BLU9 (uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of MS023840 vs. ExPASy TrEMBL
Match: A0A0A0L7H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34 Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of MS023840 vs. TAIR 10
Match: AT5G55570.1 (unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 133.7 bits (335), Expect = 8.5e-32 Identity = 62/99 (62.63%), Postives = 80/99 (80.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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