MS023677 (gene) Bitter gourd (TR) v1

Overview


Name	MS023677
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal S3-like protein
Location	scaffold570: 199103 .. 201343 (+)
RNA-Seq Expression	MS023677
Synteny	MS023677

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCGATTTTGTTGCAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTCAGTTTTCATCGATTTCGAAATTCAATTGATTAAACAGCTTTACTTTGTGCTCCATGCTCTCCAATAGATTGAACGTCTTAGGTTAACAGTTATCGATATTATTTGGCAATTTTCTTAGAAAATTTTATTTGGTAATATAGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGTACTTTGTTTTTCTCTTTTCATTCCCCGTGTTATTATGTTATTATTTTATTGATTCTGACTTGCAAATTGAACTACGATTTATGATTGTGAAGGAATGCAGATCACATATTCATTATCATACTGCGTATAGCTCTGATACATAGTGTTAGTTTGTGGTATTTGATTCCACATCTCATTGAAGGGAAATGACTCCGTTCTGTTGTAGTTCCATACGAGTTGTTTTTTAATATCTGGTTTCGTTTTTATGTCATCTACAAAGCAGATTGGTGTTTTGGTACCAACTTTGTGTCGGAAGGTGACAATATTAATTGAGCTCTTCCATTTGATAATCATTGTGGAATCATTATGTTTCCACACTGTAATAATGGAGGAGACATGCGGGTACCTGGTGGTATCTTTAGCCTCCTTGTTCTGCTACTTTTGATTTCTCTGTCGCAATGCTTTAATAGTCTAAAGCGTTAGGCCTTTATATTTATTAAGAAATAACTATTCAAACCATAAAAACGTACAATCAACTAGTATATAAAGCATAATGATTGTATGGAAGGGTAAAAAATACACACTTATCATCAGTTGCACTTTCTTTAAAAGGATTCTACAAGGTCATTCTTAGCATCTTTACCATAACTAATCAATTGACTTGTTTTTAAATTTTGTTTGCATGTTTTTAAATCTATGTGTTAAGTGTAGGAATAGGCTTAACTACTGCAACTTGTGATGTATTAGTATTACAAAGGAACTTGTACATTTTGAAGACCATGCAAATTAACACTATTATTCTAACCATTACTTAAGGGAAAGACTTTGAGCCTTAGTGTCTCATGGAGGCTTGAAGACTCCAAAGCCTTTAGAACATTATGGGAGAATATAACATTACAAGTGTAGGTGGGAATTCGAATCTTCAACATTAAGGGAGAATGTTTATATCTTAACTAATTGAGCTATGTTTAAGTTGACAAACATACATAATCTTATACATAAAAATGTATGGTGGTTGTGCTTTTCAGTATCTGTGGTGTCTTTTATTGTTATCTAACAGGTAGGCTCCTTTTATTATTAGTTTTGAAGTATGTAAGTTCATTGGTTTAAGAGTCTATGATGCCATTTTATTTGATCCTTTTGACTTGCCTATTATGAGCAATAGGAGTATTAGAAAGAATATGTACTACTTTCAGTTAATTTTCACATGCTTATATATATACTTTGTTCATCAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTTAGCTTTTAGCTCAATCATCATTAATTTCACTGTATGAAAAATTATTGTTGGATATTTATACATGGTAATTCTCAACGTCCAAACAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGTTTGCTTACAATGGTCCTACAAGAAACAGGTTCTTACTCGATGTGTTCTGTTGTTGTATGCTGATGTTATTGTTGTTTTCCTTTTTGGCTCAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCGCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCT

mRNA sequence

TGTTCGATTTTGTTGCAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCGCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCT

Coding sequence (CDS)

TGTTCGATTTTGTTGCAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCGCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCT

Protein sequence

CSILLQFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA

Homology

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BLAST of MS023677 vs. NCBI nr
Match: XP_022154712.1 (40S ribosomal protein S3-2-like [Momordica charantia])

HSP 1 Score: 442.2 bits (1136), Expect = 2.8e-120
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 237

[Close]

BLAST of MS023677 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 223/230 (96.96%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP--AILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP  A+L+TDIE+PVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVA 239

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BLAST of MS023677 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 222/228 (97.37%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-AILSTDIEIPVVV 233
           LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP A+L+TDIE+PV V
Sbjct: 190 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVAV 237

[Close]

BLAST of MS023677 vs. NCBI nr
Match: KAG6599520.1 (40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 223/232 (96.12%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 660 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 719

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 720 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 779

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 780 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 839

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP----AILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP    A+L+TDIE+PVVVA
Sbjct: 840 LDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAVLTTDIEVPVVVA 891

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BLAST of MS023677 vs. NCBI nr
Match: XP_022946744.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 3.8e-117
Identity = 223/234 (95.30%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP------AILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      A+L+TDIE+PVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPVVVA 243

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BLAST of MS023677 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 5.3e-106
Identity = 200/231 (86.58%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+M
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKVM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEI-----VHRPAILSTDIEIPVV 232
           LDWDPKG  GP TPLPDVV IHSPKEEE I     V  PA L  D  +  V
Sbjct: 190 LDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of MS023677 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.7e-105
Identity = 191/224 (85.27%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIM
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIP 230
           LDWDPKGKQGP TPLPDVV IH+PKE++  +    +++    +P
Sbjct: 190 LDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of MS023677 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 8.5e-104
Identity = 189/207 (91.30%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEE 213
           LDWDP GK GP TPLPDVV IH+PK++
Sbjct: 190 LDWDPTGKSGPKTPLPDVVIIHAPKDD 216

[Close]

BLAST of MS023677 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-92
Identity = 175/207 (84.54%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           T+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES
Sbjct: 70  TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEE 213
           L WDP GK GP  PLPD V+I  PK+E
Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of MS023677 vs. ExPASy Swiss-Prot
Match: E2RH47 (40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-92
Identity = 175/207 (84.54%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           T+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES
Sbjct: 70  TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEE 213
           L WDP GK GP  PLPD V+I  PK+E
Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of MS023677 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 237

[Close]

BLAST of MS023677 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 223/234 (95.30%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP------AILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      A+L+TDIE+PVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPVVVA 243

[Close]

BLAST of MS023677 vs. ExPASy TrEMBL
Match: A0A6J1KF90 (40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117
Identity = 222/232 (95.69%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP----AILSTDIEIPVVVA 234
           LDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP    A+L+TDIE+PVVVA
Sbjct: 190 LDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPSAAAAVLTTDIEVPVVVA 241

[Close]

BLAST of MS023677 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.1e-117
Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 233
           LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 190 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 237

[Close]

BLAST of MS023677 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.1e-117
Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 233
           LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 190 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 237

[Close]

BLAST of MS023677 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 385.2 bits (988), Expect = 3.8e-107
Identity = 200/231 (86.58%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+M
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKVM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEI-----VHRPAILSTDIEIPVV 232
           LDWDPKG  GP TPLPDVV IHSPKEEE I     V  PA L  D  +  V
Sbjct: 190 LDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of MS023677 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 381.3 bits (978), Expect = 5.4e-106
Identity = 191/224 (85.27%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIM
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIP 230
           LDWDPKGKQGP TPLPDVV IH+PKE++  +    +++    +P
Sbjct: 190 LDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of MS023677 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 377.9 bits (969), Expect = 6.0e-105
Identity = 189/207 (91.30%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 6   QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 65
           +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL
Sbjct: 10  KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query: 66  TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 125
           TS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES
Sbjct: 70  TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129

Query: 126 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIM 185
           GAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIM
Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIM 189

Query: 186 LDWDPKGKQGPTTPLPDVVTIHSPKEE 213
           LDWDP GK GP TPLPDVV IH+PK++
Sbjct: 190 LDWDPTGKSGPKTPLPDVVIIHAPKDD 216

The following BLAST results are available for this feature:

BLAST of MS023677 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154712.1	2.8e-120	99.56	40S ribosomal protein S3-2-like [Momordica charantia]	[more]
XP_023546322.1	1.3e-117	96.96	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_038890738.1	2.2e-117	97.37	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
KAG6599520.1	2.2e-117	96.12	40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946744.1	3.8e-117	95.30	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]

BLAST of MS023677 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M339	5.3e-106	86.58	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9FJA6	7.7e-105	85.27	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9SIP7	8.5e-104	91.30	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	1.5e-92	84.54	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
E2RH47	1.5e-92	84.54	40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1	[more]

BLAST of MS023677 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMD4	1.3e-120	99.56	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A6J1G4R4	1.8e-117	95.30	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]
A0A6J1KF90	3.1e-117	95.69	40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3...	[more]
A0A0A0LHQ6	4.1e-117	96.93	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	4.1e-117	96.93	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]

BLAST of MS023677 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53870.1	3.8e-107	86.58	Ribosomal protein S3 family protein	[more]
AT5G35530.1	5.4e-106	85.27	Ribosomal protein S3 family protein	[more]
AT2G31610.1	6.0e-105	91.30	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 102..184 e-value: 2.2E-25 score: 89.0
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 6..207 e-value: 4.7E-70 score: 233.3
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 89..215 e-value: 8.2E-67 score: 225.0
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 89..187
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..87 e-value: 5.3E-44 score: 150.1
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 16..89 e-value: 1.0E-12 score: 47.7
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 17..88 score: 11.333969
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 6..229
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 6..229
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 11..91 e-value: 1.15141E-51 score: 160.466
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 143..179
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 6..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023677.1	MS023677.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome