|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GAAGAGATGATCGGCTTACATGACTATGGTGATACTCATGCCAATCACAAACATGATCCTCATCATCCTCTTGCTGTCAAAGGTAAAGAAAAAAAAAAGAAACTAACTTCA mRNA sequence GAAGAGATGATCGGCTTACATGACTATGGTGATACTCATGCCAATCACAAACATGATCCTCATCATCCTCTTGCTGTCAAAGGTAAAGAAAAAAAAAAGAAACTAACTTCA Coding sequence (CDS) GAAGAGATGATCGGCTTACATGACTATGGTGATACTCATGCCAATCACAAACATGATCCTCATCATCCTCTTGCTGTCAAAGGTAAAGAAAAAAAAAAGAAACTAACTTCA Protein sequence EEMIGLHDYGDTHANHKHDPHHPLAVKGKEKKKKLTS
Homology
BLAST of MS023571 vs. NCBI nr
Match: XP_022150920.1 (uncharacterized protein LOC111018956 [Momordica charantia]) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08 Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 Query: 1 EEMIGLHDYGDTHANHKHDPHHPLAVKGKEKK 33 EEMIGLHDYGDTHANHKHDPHHPLAVKG K+ Sbjct: 69 EEMIGLHDYGDTHANHKHDPHHPLAVKGNNKE 100
BLAST of MS023571 vs. ExPASy TrEMBL
Match: A0A6J1D9T4 (uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018956 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-08 Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 Query: 1 EEMIGLHDYGDTHANHKHDPHHPLAVKGKEKK 33 EEMIGLHDYGDTHANHKHDPHHPLAVKG K+ Sbjct: 69 EEMIGLHDYGDTHANHKHDPHHPLAVKGNNKE 100
BLAST of MS023571 vs. ExPASy TrEMBL
Match: A0A6J1K9X5 (uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.2e-04 Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0 Query: 1 EEMIGLHDYGDTHANHKHDPHHPLAVKGKEKK 33 +EMIGL DYGD ANH+H+PHHPL V+G +K+ Sbjct: 42 DEMIGLRDYGDARANHRHEPHHPLGVEGYKKE 73
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150920.1 | 3.0e-08 | 90.63 | uncharacterized protein LOC111018956 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D9T4 | 1.4e-08 | 90.63 | uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1K9X5 | 6.2e-04 | 65.63 | uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..37 |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS023571.1 | MS023571.1 | mRNA |
|