MS023322 (gene) Bitter gourd (TR) v1

Overview


Name	MS023322
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Location	scaffold101: 872656 .. 873231 (+)
RNA-Seq Expression	MS023322
Synteny	MS023322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTGTCCATAGCCGCCGCGGCGCCACCGGGTTCGGCGAGCCGATCCCACCACCGCACCCACAAGATCTTCCTTTTCTGCAACTACGTGCTCCTCGGGGCCGCGTCGAGCTGCATCTTCCTCACGCTCTCGCTCCGCCTCCTCCCCTCCGTCTGCGGGATCTCCCTCGTCTTCCTCCACGCCATCACCATCGCGGCCGCCGTGTCGGGGTGCACGATGGTGGGGTCGGGGTCGGCGCGGTGGTTCGGGGCGCACATGGTGGTGACGGTGATGGCGGCGATATTCCAGGGGTCGGTGGCGGTGCTGGCGTACACGAGGACCGGGGAGTTTCTCGGGGAGATGAAGACGTACGTGAGGGCGGAGGATGCGGCGGTGATTCTGAAGCTGGCCGGAGGGCTGAGCGTTGCTATGTTTTGGTTGGAGTGGGTGGCTCTGACGCTGGCGTTTTTCTTGAGGTATTATGCGTTTGTTGAAGAAGAACAAGGAGGAGGAGTTGTGGGTTTGAGGAGGAGTTGTGCTAAAGTGCAGCAGGATGATCAGGATTTGAAGGACTGGCCATGGCCATTTCAAGTT

mRNA sequence

ATGGGTCTGTCCATAGCCGCCGCGGCGCCACCGGGTTCGGCGAGCCGATCCCACCACCGCACCCACAAGATCTTCCTTTTCTGCAACTACGTGCTCCTCGGGGCCGCGTCGAGCTGCATCTTCCTCACGCTCTCGCTCCGCCTCCTCCCCTCCGTCTGCGGGATCTCCCTCGTCTTCCTCCACGCCATCACCATCGCGGCCGCCGTGTCGGGGTGCACGATGGTGGGGTCGGGGTCGGCGCGGTGGTTCGGGGCGCACATGGTGGTGACGGTGATGGCGGCGATATTCCAGGGGTCGGTGGCGGTGCTGGCGTACACGAGGACCGGGGAGTTTCTCGGGGAGATGAAGACGTACGTGAGGGCGGAGGATGCGGCGGTGATTCTGAAGCTGGCCGGAGGGCTGAGCGTTGCTATGTTTTGGTTGGAGTGGGTGGCTCTGACGCTGGCGTTTTTCTTGAGGTATTATGCGTTTGTTGAAGAAGAACAAGGAGGAGGAGTTGTGGGTTTGAGGAGGAGTTGTGCTAAAGTGCAGCAGGATGATCAGGATTTGAAGGACTGGCCATGGCCATTTCAAGTT

Coding sequence (CDS)

ATGGGTCTGTCCATAGCCGCCGCGGCGCCACCGGGTTCGGCGAGCCGATCCCACCACCGCACCCACAAGATCTTCCTTTTCTGCAACTACGTGCTCCTCGGGGCCGCGTCGAGCTGCATCTTCCTCACGCTCTCGCTCCGCCTCCTCCCCTCCGTCTGCGGGATCTCCCTCGTCTTCCTCCACGCCATCACCATCGCGGCCGCCGTGTCGGGGTGCACGATGGTGGGGTCGGGGTCGGCGCGGTGGTTCGGGGCGCACATGGTGGTGACGGTGATGGCGGCGATATTCCAGGGGTCGGTGGCGGTGCTGGCGTACACGAGGACCGGGGAGTTTCTCGGGGAGATGAAGACGTACGTGAGGGCGGAGGATGCGGCGGTGATTCTGAAGCTGGCCGGAGGGCTGAGCGTTGCTATGTTTTGGTTGGAGTGGGTGGCTCTGACGCTGGCGTTTTTCTTGAGGTATTATGCGTTTGTTGAAGAAGAACAAGGAGGAGGAGTTGTGGGTTTGAGGAGGAGTTGTGCTAAAGTGCAGCAGGATGATCAGGATTTGAAGGACTGGCCATGGCCATTTCAAGTT

Protein sequence

MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

Homology

[Close]

BLAST of MS023322 vs. NCBI nr
Match: XP_038904159.1 (uncharacterized protein LOC120090516 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 8.6e-67
Identity = 138/192 (71.88%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  A P  S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TANPSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + SARWFG HMV TV+ AIFQGSVA+L +TRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAMLVFTRTGDFLWELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE E      G+    AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNSSNGVGMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 190

[Close]

BLAST of MS023322 vs. NCBI nr
Match: XP_004148268.1 (uncharacterized protein LOC101206234 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 2.5e-66
Identity = 138/192 (71.88%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVA+L YTRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEE--GSNNNGAAMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 188

[Close]

BLAST of MS023322 vs. NCBI nr
Match: XP_023005568.1 (uncharacterized protein LOC111498512 [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVF 60
           MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+F
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYV 120
           LH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVAVL YTRTG+FLGE+K+YV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGTHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 RAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQD 180
           R ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q 
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQ- 180

Query: 181 DQDLKDWPWPFQV 193
           D+DLKDWPWPFQV
Sbjct: 181 DEDLKDWPWPFQV 192

[Close]

BLAST of MS023322 vs. NCBI nr
Match: XP_023540529.1 (uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 5.6e-66
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVF 60
           MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+F
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYV 120
           LH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVAVL YTRTG+FLGE+K+YV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 RAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQD 180
           R ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q 
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQ- 180

Query: 181 DQDLKDWPWPFQV 193
           D+DLKDWPWPFQV
Sbjct: 181 DEDLKDWPWPFQV 192

[Close]

BLAST of MS023322 vs. NCBI nr
Match: KAE8650098.1 (hypothetical protein Csa_010636 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 5.6e-66
Identity = 137/192 (71.35%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVA+L YTRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEE--GSNNNGAAMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQ+
Sbjct: 181 EDLKDWPWPFQL 188

[Close]

BLAST of MS023322 vs. ExPASy TrEMBL
Match: A0A0A0L253 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045140 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 138/192 (71.88%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVA+L YTRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEE--GSNNNGAAMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 188

[Close]

BLAST of MS023322 vs. ExPASy TrEMBL
Match: A0A6J1L2J4 (uncharacterized protein LOC111498512 OS=Cucurbita maxima OX=3661 GN=LOC111498512 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.1e-66
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVF 60
           MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+F
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYV 120
           LH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVAVL YTRTG+FLGE+K+YV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGTHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 RAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQD 180
           R ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q 
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQ- 180

Query: 181 DQDLKDWPWPFQV 193
           D+DLKDWPWPFQV
Sbjct: 181 DEDLKDWPWPFQV 192

[Close]

BLAST of MS023322 vs. ExPASy TrEMBL
Match: A0A6J1H1G8 (uncharacterized protein LOC111459467 OS=Cucurbita moschata OX=3662 GN=LOC111459467 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVF 60
           MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+F
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYV 120
           LH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVAVL YTRTG+FLGE+K+YV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 RAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQD 180
           R ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q 
Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQ- 180

Query: 181 DQDLKDWPWPFQV 193
           D+DLKDWPWPFQV
Sbjct: 181 DEDLKDWPWPFQV 192

[Close]

BLAST of MS023322 vs. ExPASy TrEMBL
Match: A0A5D3D734 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00100 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 137/192 (71.35%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVA+L YTRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVE + G    G     AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGD-GSNNNGAAMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 189

[Close]

BLAST of MS023322 vs. ExPASy TrEMBL
Match: A0A1S3BL21 (uncharacterized protein LOC103491004 OS=Cucumis melo OX=3656 GN=LOC103491004 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 137/192 (71.35%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFL 60
           MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FL
Sbjct: 1   MGFSI-TSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60

Query: 61  HAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVR 120
           H +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSVA+L YTRTG+FL E+K+YVR
Sbjct: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYVR 120

Query: 121 AEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDD 180
            ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVE + G    G     AKVQQ D
Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGD-GSNNNGAAMRSAKVQQ-D 180

Query: 181 QDLKDWPWPFQV 193
           +DLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 189

[Close]

BLAST of MS023322 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-57
Identity = 114/188 (60.64%), Postives = 142/188 (75.53%), Query Frame = 0


Query: 5   IAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAIT 64
           I++++P      SH+ THKIFLF NY+LLGAASSCIFLTLSLRL+PS+CG  L+ LHA T
Sbjct: 4   ISSSSP---VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATT 63

Query: 65  IAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVRAEDA 124
           IAAAVSGC     G  RW+ AHMV TV+ AIFQGSV+VL +T T +FLG +K+YVR EDA
Sbjct: 64  IAAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDA 123

Query: 125 AVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLK 184
           AVILKL GGL + +F L+W+ L  AFFL+YYA+V+   GG  V ++R+  KVQ ++   K
Sbjct: 124 AVILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVD---GGDGVAMKRT-GKVQSEENP-K 183

Query: 185 DWPWPFQV 193
           DWPWPFQV
Sbjct: 184 DWPWPFQV 183

[Close]

BLAST of MS023322 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 201.8 bits (512), Expect = 4.9e-52
Identity = 106/183 (57.92%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 10  PPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAV 69
           P  S   SH+ THK+FL  NYVLLGA+SSCIFLTLSLRL+PS+CG  L+ LHA TIAAAV
Sbjct: 7   PQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAV 66

Query: 70  SGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVRAEDAAVILK 129
           SGC     G  RW+ AHM+ TV+ AIFQGSV+VL +T T  FL  + +YVR ++A++ILK
Sbjct: 67  SGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILK 126

Query: 130 LAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWP 189
           LAGGL V +F LEW+ L LAFFL+YYA+V+ +  G  V ++R+  KV Q ++ LK+ PW 
Sbjct: 127 LAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNG--VAMKRT-GKV-QSEETLKNSPWA 185

Query: 190 FQV 193
           FQV
Sbjct: 187 FQV 185

[Close]

BLAST of MS023322 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-47
Identity = 101/184 (54.89%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 15  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTM 74
           S+S   TH IFL CNY+LLG+ASSCIFLT+SLRL PS+ G+SL+FL+ +TIA AVSGC++
Sbjct: 4   SKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSI 63

Query: 75  VGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVRAEDAAVILK 134
             S      S R +G+HMV TV+ AIFQG+V+VL +TRTG+FL  +K+YVR ED  VILK
Sbjct: 64  FASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILK 123

Query: 135 LAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-W 193
           L+GGL V MF LEW+ L LAF L+Y  +++E        +     KV++ ++DLKDWP +
Sbjct: 124 LSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESV------VDDDDFKVRRQEEDLKDWPSY 181

[Close]

BLAST of MS023322 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-47
Identity = 101/184 (54.89%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 15  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTM 74
           S+S   TH IFL CNY+LLG+ASSCIFLT+SLRL PS+ G+SL+FL+ +TIA AVSGC++
Sbjct: 4   SKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSI 63

Query: 75  VGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGEFLGEMKTYVRAEDAAVILK 134
             S      S R +G+HMV TV+ AIFQG+V+VL +TRTG+FL  +K+YVR ED  VILK
Sbjct: 64  FASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILK 123

Query: 135 LAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-W 193
           L+GGL V MF LEW+ L LAF L+Y  +++E        +     KV++ ++DLKDWP +
Sbjct: 124 LSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESV------VDDDDFKVRRQEEDLKDWPSY 181

The following BLAST results are available for this feature:

BLAST of MS023322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904159.1	8.6e-67	71.88	uncharacterized protein LOC120090516 [Benincasa hispida]	[more]
XP_004148268.1	2.5e-66	71.88	uncharacterized protein LOC101206234 [Cucumis sativus]	[more]
XP_023005568.1	4.3e-66	70.98	uncharacterized protein LOC111498512 [Cucurbita maxima]	[more]
XP_023540529.1	5.6e-66	70.98	uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo]	[more]
KAE8650098.1	5.6e-66	71.35	hypothetical protein Csa_010636 [Cucumis sativus]	[more]

BLAST of MS023322 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS023322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L253	1.2e-66	71.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045140 PE=4 SV=1	[more]
A0A6J1L2J4	2.1e-66	70.98	uncharacterized protein LOC111498512 OS=Cucurbita maxima OX=3661 GN=LOC111498512...	[more]
A0A6J1H1G8	2.7e-66	70.98	uncharacterized protein LOC111459467 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A5D3D734	1.0e-65	71.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BL21	1.0e-65	71.35	uncharacterized protein LOC103491004 OS=Cucumis melo OX=3656 GN=LOC103491004 PE=...	[more]

BLAST of MS023322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16250.1	2.3e-57	60.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02640.1	4.9e-52	57.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G36800.1	2.8e-47	54.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G36710.1	2.8e-47	54.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN-RELATED	coord: 8..192
None	No IPR available	PANTHER	PTHR34124	F16B3.27 PROTEIN-RELATED	coord: 8..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023322.1	MS023322.1	mRNA