MS023294 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAACTCAGCGGCGGCGTTCATAAGAAGAAGCAGCCTAAATGTGGAATCTGTGGGAAGGAGTTTTGTTCCATGAAGGGTTTGTATGGTCACATGAGGACTCATCCAGACCGATCCTGGAGAGGGATTGAACCTCCGAATACTGTAACGACAACAGCTCCGGCCTGGTCTCTCACCGCCCCGAGAGGGCGGAAG ATTAAACTCAGCGGCGGCGTTCATAAGAAGAAGCAGCCTAAATGTGGAATCTGTGGGAAGGAGTTTTGTTCCATGAAGGGTTTGTATGGTCACATGAGGACTCATCCAGACCGATCCTGGAGAGGGATTGAACCTCCGAATACTGTAACGACAACAGCTCCGGCCTGGTCTCTCACCGCCCCGAGAGGGCGGAAG ATTAAACTCAGCGGCGGCGTTCATAAGAAGAAGCAGCCTAAATGTGGAATCTGTGGGAAGGAGTTTTGTTCCATGAAGGGTTTGTATGGTCACATGAGGACTCATCCAGACCGATCCTGGAGAGGGATTGAACCTCCGAATACTGTAACGACAACAGCTCCGGCCTGGTCTCTCACCGCCCCGAGAGGGCGGAAG IKLSGGVHKKKQPKCGICGKEFCSMKGLYGHMRTHPDRSWRGIEPPNTVTTTAPAWSLTAPRGRK Homology
BLAST of MS023294 vs. NCBI nr
Match: XP_022143487.1 (uncharacterized protein LOC111013363 [Momordica charantia]) HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MS023294 vs. NCBI nr
Match: PHT44057.1 (hypothetical protein CQW23_18082 [Capsicum baccatum]) HSP 1 Score: 81.3 bits (199), Expect = 3.5e-12 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of MS023294 vs. NCBI nr
Match: KAF3666527.1 (hypothetical protein FXO37_10506 [Capsicum annuum]) HSP 1 Score: 80.5 bits (197), Expect = 5.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. NCBI nr
Match: PHT77464.1 (hypothetical protein T459_20986 [Capsicum annuum]) HSP 1 Score: 80.5 bits (197), Expect = 5.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. NCBI nr
Match: PHU12866.1 (hypothetical protein BC332_19796 [Capsicum chinense]) HSP 1 Score: 80.5 bits (197), Expect = 5.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 9.2e-08 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of MS023294 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.0e-07 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of MS023294 vs. ExPASy TrEMBL
Match: A0A6J1CQY7 (uncharacterized protein LOC111013363 OS=Momordica charantia OX=3673 GN=LOC111013363 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.6e-32 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MS023294 vs. ExPASy TrEMBL
Match: A0A2G2WFN4 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_18082 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of MS023294 vs. ExPASy TrEMBL
Match: A0A2G3C2B5 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_19796 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. ExPASy TrEMBL
Match: A0A1U8HEI9 (zinc finger protein ZAT2 OS=Capsicum annuum OX=4072 GN=LOC107877438 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. ExPASy TrEMBL
Match: A0A2G2Z677 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_20986 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS023294 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 58.2 bits (139), Expect = 2.9e-09 Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MS023294 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein ) HSP 1 Score: 57.0 bits (136), Expect = 6.6e-09 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of MS023294 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family ) HSP 1 Score: 56.6 bits (135), Expect = 8.6e-09 Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0
BLAST of MS023294 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein ) HSP 1 Score: 54.3 bits (129), Expect = 4.2e-08 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of MS023294 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.0e-06 Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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