MS021954 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTAATTCATTTCGTTGTCTTTTTCTTCTTTTTTGGAAATTGCTTTGGCCTGTCTTTTAAATTTTTGCTTAGATCCTTATTGACCTTTTAGGTTGATCGTTTCCATTATCATAATTTTCTCGATCTCTACTAGTAGTCGAATCCATATAAATACGTAGAAATGTGAACGAACAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC IMVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPSGRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY Homology
BLAST of MS021954 vs. NCBI nr
Match: XP_038890646.1 (uncharacterized protein LOC120080152 [Benincasa hispida]) HSP 1 Score: 251.1 bits (640), Expect = 6.1e-63 Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of MS021954 vs. NCBI nr
Match: XP_004152866.1 (uncharacterized protein LOC101218582 [Cucumis sativus] >KGN61292.1 hypothetical protein Csa_006612 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62 Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. NCBI nr
Match: XP_008441789.1 (PREDICTED: uncharacterized protein LOC103485843 [Cucumis melo] >KAA0040431.1 calcium-dependent lipid-binding (CaLB domain) family protein [Cucumis melo var. makuwa] >TYJ98676.1 calcium-dependent lipid-binding (CaLB domain) family protein [Cucumis melo var. makuwa]) HSP 1 Score: 247.7 bits (631), Expect = 6.7e-62 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of MS021954 vs. NCBI nr
Match: XP_023546643.1 (uncharacterized protein LOC111805697 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 127/154 (82.47%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. NCBI nr
Match: XP_022929580.1 (uncharacterized protein LOC111436123 [Cucurbita moschata]) HSP 1 Score: 244.6 bits (623), Expect = 5.7e-61 Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. ExPASy Swiss-Prot
Match: O04023 (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04 Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0
BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A0A0LKL3 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G076000 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A5D3BHX8 (Calcium-dependent lipid-binding (CaLB domain) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00020 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A1S3B489 (uncharacterized protein LOC103485843 OS=Cucumis melo OX=3656 GN=LOC103485843 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A6J1EUS2 (uncharacterized protein LOC111436123 OS=Cucurbita moschata OX=3662 GN=LOC111436123 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61 Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A6J1K775 (uncharacterized protein LOC111492275 OS=Cucurbita maxima OX=3661 GN=LOC111492275 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60 Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS021954 vs. TAIR 10
Match: AT2G33320.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41 Identity = 86/161 (53.42%), Postives = 112/161 (69.57%), Query Frame = 0
BLAST of MS021954 vs. TAIR 10
Match: AT1G04540.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 162.5 bits (410), Expect = 2.6e-40 Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0
BLAST of MS021954 vs. TAIR 10
Match: AT2G13350.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36 Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of MS021954 vs. TAIR 10
Match: AT3G04360.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of MS021954 vs. TAIR 10
Match: AT4G01200.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|