MS021954 (gene) Bitter gourd (TR) v1

Overview
NameMS021954
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2 domain-containing protein
Locationscaffold110: 546879 .. 547516 (-)
RNA-Seq ExpressionMS021954
SyntenyMS021954
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTAATTCATTTCGTTGTCTTTTTCTTCTTTTTTGGAAATTGCTTTGGCCTGTCTTTTAAATTTTTGCTTAGATCCTTATTGACCTTTTAGGTTGATCGTTTCCATTATCATAATTTTCTCGATCTCTACTAGTAGTCGAATCCATATAAATACGTAGAAATGTGAACGAACAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC

mRNA sequence

ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC

Coding sequence (CDS)

ATCATGGTGCGGCGAGGGTCCCGCGTTCTGGAGCTGAGCCTGCTGTACGCCAAGGACCTGGCCTCGGTGTCCAAGACCATGCGGACCTTCGCGGTGGCGTGGGTCAATCCGGACCGGAAGCTCACCACGCGGGTCGACCAGGAGGGCCTCACCAATCCCACGTGGAATGAGAAGTTCGTTTTTCGGGTCGATGATTTGTTCCTCGAAGACCCCAACTCGACGGTTACCATCGAGATCTACGCCTCCGCCCTCCTCCGGGATATCCTCGTCGGGACCGTCACCGAGCTCGTCGGCAACCTCGTCCCGCCCTCCACTAAGCCTAATGCCATGCACTTCTTCACGCTTCAGGTACGGCGTCCATCGGGGCGGCCGAAGGGCATCGTGAATGTTGGCGTGACGCTTCTAGACAGCGCGAAACGGAGCATGCCGTTAGAGAGCGATCTGGGATCCTCCGCCGTGGACTAC

Protein sequence

IMVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPSGRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY
Homology
BLAST of MS021954 vs. NCBI nr
Match: XP_038890646.1 (uncharacterized protein LOC120080152 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 6.1e-63
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVRR  +VLELSLL A DLASVSKTMRTFAVAW+NP+RKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRRPFQVLELSLLSANDLASVSKTMRTFAVAWINPNRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDELLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSSKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKGIV VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGIVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. NCBI nr
Match: XP_004152866.1 (uncharacterized protein LOC101218582 [Cucumis sativus] >KGN61292.1 hypothetical protein Csa_006612 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62
Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVR+  +VLELSLL A DLASVSKTMRTFAVAW+NPDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRQPFQVLELSLLSANDLASVSKTMRTFAVAWINPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDDLLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSSKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG V VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGTVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. NCBI nr
Match: XP_008441789.1 (PREDICTED: uncharacterized protein LOC103485843 [Cucumis melo] >KAA0040431.1 calcium-dependent lipid-binding (CaLB domain) family protein [Cucumis melo var. makuwa] >TYJ98676.1 calcium-dependent lipid-binding (CaLB domain) family protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 6.7e-62
Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVR   +VLELSLL A DLASVSKTMRTFAVAW+NPDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRPPFQVLELSLLSANDLASVSKTMRTFAVAWINPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDDLLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSPKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG V VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGTVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. NCBI nr
Match: XP_023546643.1 (uncharacterized protein LOC111805697 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 127/154 (82.47%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           M RR  R+LELSLL AKDL+SVSKTMRTFAVAW++PDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MARRPFRILELSLLSAKDLSSVSKTMRTFAVAWIDPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +V+D  LED NSTVTIEIY+SALLRDILVGTVTELV NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVNDDLLEDLNSTVTIEIYSSALLRDILVGTVTELVRNLIPQSSPSSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG VNVGVTLLDSAKRSMPLESDL SSAVDY
Sbjct: 121 GRPKGTVNVGVTLLDSAKRSMPLESDLSSSAVDY 154

BLAST of MS021954 vs. NCBI nr
Match: XP_022929580.1 (uncharacterized protein LOC111436123 [Cucurbita moschata])

HSP 1 Score: 244.6 bits (623), Expect = 5.7e-61
Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           M RR  R+LELSLL AKDL+SVSKTMRTFAVAW++PDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MARRPFRILELSLLSAKDLSSVSKTMRTFAVAWIDPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +V+D  LED N+TVTIEIY+SALLRDILVGTVTELV NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVNDDLLEDLNATVTIEIYSSALLRDILVGTVTELVRNLIPQSSPSSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG VNVGVTLLDSAKRSMPLESDL SSAVDY
Sbjct: 121 GRPKGTVNVGVTLLDSAKRSMPLESDLSSSAVDY 154

BLAST of MS021954 vs. ExPASy Swiss-Prot
Match: O04023 (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0

Query: 8   RVLELSLLYAKDLASVSKTMR--TFAVAWVNPD--RKLTTRVDQEGLTNPTWNEKFVFRV 67
           R L+L+++ A+DL  V    +   +AV  +N D   K  T+VD++  T P W  +    V
Sbjct: 4   RSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWKHQMKLTV 63

Query: 68  DDLFLEDPNSTVTIEIYAS-ALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPSG 127
           DD    D   T+  EI A   +  D  VG V+  V  L+    K +     T  VR P+G
Sbjct: 64  DDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELL-DQNKGDEEKTVTYAVRLPNG 123

BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A0A0LKL3 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G076000 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVR+  +VLELSLL A DLASVSKTMRTFAVAW+NPDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRQPFQVLELSLLSANDLASVSKTMRTFAVAWINPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDDLLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSSKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG V VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGTVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A5D3BHX8 (Calcium-dependent lipid-binding (CaLB domain) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00020 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62
Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVR   +VLELSLL A DLASVSKTMRTFAVAW+NPDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRPPFQVLELSLLSANDLASVSKTMRTFAVAWINPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDDLLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSPKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG V VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGTVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A1S3B489 (uncharacterized protein LOC103485843 OS=Cucumis melo OX=3656 GN=LOC103485843 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62
Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           MVR   +VLELSLL A DLASVSKTMRTFAVAW+NPDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MVRPPFQVLELSLLSANDLASVSKTMRTFAVAWINPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +VDD  LEDP STVTIEIY+SALLRDILVGTVTE+V NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVDDDLLEDPTSTVTIEIYSSALLRDILVGTVTEVVSNLIPQSSPKSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG V VGVTLLDSAKRSMPLESDLGSSAVDY
Sbjct: 121 GRPKGTVKVGVTLLDSAKRSMPLESDLGSSAVDY 154

BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A6J1EUS2 (uncharacterized protein LOC111436123 OS=Cucurbita moschata OX=3662 GN=LOC111436123 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           M RR  R+LELSLL AKDL+SVSKTMRTFAVAW++PDRKLTTRVDQ GLTNPTWNEKFVF
Sbjct: 1   MARRPFRILELSLLSAKDLSSVSKTMRTFAVAWIDPDRKLTTRVDQVGLTNPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +V+D  LED N+TVTIEIY+SALLRDILVGTVTELV NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVNDDLLEDLNATVTIEIYSSALLRDILVGTVTELVRNLIPQSSPSSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG VNVGVTLLDSAKRSMPLESDL SSAVDY
Sbjct: 121 GRPKGTVNVGVTLLDSAKRSMPLESDLSSSAVDY 154

BLAST of MS021954 vs. ExPASy TrEMBL
Match: A0A6J1K775 (uncharacterized protein LOC111492275 OS=Cucurbita maxima OX=3661 GN=LOC111492275 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 2   MVRRGSRVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVF 61
           M RR  R+LELSLL AKDL+SVSKTMRTFAVAW++PDRKLTTRVDQ GLT+PTWNEKFVF
Sbjct: 1   MARRPFRILELSLLSAKDLSSVSKTMRTFAVAWIDPDRKLTTRVDQVGLTSPTWNEKFVF 60

Query: 62  RVDDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPS 121
           +V+D  LED N+TVTIEIY+SALLRDILVGTVTELV NL+P S+  + M F TLQVRRPS
Sbjct: 61  KVNDDLLEDLNATVTIEIYSSALLRDILVGTVTELVRNLIPQSSPSSNMRFLTLQVRRPS 120

Query: 122 GRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           GRPKG VNVGVTLLDSAKRSMPLESDL SSAVDY
Sbjct: 121 GRPKGTVNVGVTLLDSAKRSMPLESDLSSSAVDY 154

BLAST of MS021954 vs. TAIR 10
Match: AT2G33320.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 86/161 (53.42%), Postives = 112/161 (69.57%), Query Frame = 0

Query: 8   RVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRVDDLF 67
           ++LEL+++ A+DLA VS+ M+T+AVAWV+ +RKLTTRVD  G  NPTWN+KFVFRV + F
Sbjct: 8   QLLELNIISAQDLAPVSRKMKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRVSEDF 67

Query: 68  LEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPS-------------TKPNAMHFFT 127
           L    S V +EIYA    RD+ VGTV  L+ NL+PP+             T P  M F  
Sbjct: 68  LYADTSAVVVEIYALHWFRDVHVGTVRVLISNLIPPNRRPGYRSNEEYRRTPPPGMRFVA 127

Query: 128 LQVRRPSGRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
           LQVRRPSGRP+GI+N+GV +LD + RSMPL +++ SSAV Y
Sbjct: 128 LQVRRPSGRPQGILNIGVGILDGSMRSMPLYTNMDSSAVGY 168

BLAST of MS021954 vs. TAIR 10
Match: AT1G04540.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.6e-40
Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0

Query: 8   RVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRVDDLF 67
           ++LEL+++ A+DLA V++  +T+AVAWV+ +RKLTTRVD  G TNPTWN+KFVFRV++ F
Sbjct: 9   QLLELNIISAQDLAPVARKTKTYAVAWVHSERKLTTRVDYNGGTNPTWNDKFVFRVNEEF 68

Query: 68  LEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPS--------------TKPNAMHFF 127
           L    S V IEIYA    RD+ VGTV  L+ NL+PP+              T P  M F 
Sbjct: 69  LYADTSAVVIEIYALHWFRDVHVGTVRVLISNLIPPNRRPGYRTSNNEYRRTPPPGMRFV 128

Query: 128 TLQVRRPSGRPKGIVNVGVTLLDSAKRSMPLESDLGSSAVDY 156
            LQVRR SGRP+GI+N+GV L+D + RSMPL + + SSAV Y
Sbjct: 129 ALQVRRTSGRPQGILNIGVGLIDGSMRSMPLYTHMDSSAVGY 170

BLAST of MS021954 vs. TAIR 10
Match: AT2G13350.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36
Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = 0

Query: 8   RVLELSLLYAKDLASVSKTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRVDDLF 67
           ++LEL+++ A++LA V++ M+T+A+AW++P+RKLTTRVD  G T+PTWN+KFVFR+D+  
Sbjct: 8   QILELNIISAQELAPVARCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDEEA 67

Query: 68  LEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPSGRPKGI 127
           L D  S V IEIYA    +DI VGTV  L+ +LV PS   +AM F TL+V R SGRP G+
Sbjct: 68  LYDATSIVVIEIYALHWFKDIHVGTVQALISDLVSPS---SAMRFVTLEVLRASGRPHGL 127

Query: 128 VNVGVTLLDSAKRSMPL--ESDL 149
           +N+ V L+D++ +SMPL  E DL
Sbjct: 128 LNIAVGLIDNSGQSMPLLFEEDL 147

BLAST of MS021954 vs. TAIR 10
Match: AT3G04360.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34
Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 0

Query: 9   VLELSLLYAKDLASVSKTMRTFAVAWVNPD--RKLTTRVDQEGLTNPTWNEKFVFRVDDL 68
           VLE++L+ A+DLA VS+ M+T++VAW+N D  RKLTTRVDQ    NP WNEKFVFRV+D 
Sbjct: 10  VLEINLISAQDLAPVSRNMKTYSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFRVNDK 69

Query: 69  FLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPP----------STKPNAMHFFTLQ 128
            L    S + IEIYA+A  +D LVGTV  L+ +L  P              N M   TLQ
Sbjct: 70  ILYVDASAIVIEIYAAAWAKDALVGTVNVLLSDLFAPWSGFGDGNDGGGGNNNMRLVTLQ 129

Query: 129 VRRPSGRPKGIVNVGVTLLDSAKRSMPLESDL 149
           +RRPSGR +G + +GV LLD  +RSMPL  ++
Sbjct: 130 IRRPSGRLQGFLRLGVALLDGGQRSMPLSIEV 161

BLAST of MS021954 vs. TAIR 10
Match: AT4G01200.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23
Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 0

Query: 7   SRVLELSLLYAKDLASVS---KTMRTFAVAWVNPDRKLTTRVDQEGLTNPTWNEKFVFRV 66
           ++VLE++L+ A+ L   +   + ++T+A  WV+   KL TR+D+ G  NP WN+KFVF+V
Sbjct: 4   TQVLEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQV 63

Query: 67  DDLFLEDPNSTVTIEIYASALLRDILVGTVTELVGNLVPPSTKPNAMHFFTLQVRRPSGR 126
              FL    S V+IEIYA   LRD L+GTV  LV N + P+          LQ+RRPSG+
Sbjct: 64  SPEFLSSETSGVSIEIYAVGYLRDHLIGTVRFLVSNFL-PTAAVKVPSLVALQIRRPSGK 123

Query: 127 PKGIVNVGVTLLDSAK 140
             G++N+   ++D+++
Sbjct: 124 FHGVLNIAAMVMDASE 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890646.16.1e-6383.77uncharacterized protein LOC120080152 [Benincasa hispida][more]
XP_004152866.12.3e-6283.12uncharacterized protein LOC101218582 [Cucumis sativus] >KGN61292.1 hypothetical ... [more]
XP_008441789.16.7e-6283.12PREDICTED: uncharacterized protein LOC103485843 [Cucumis melo] >KAA0040431.1 cal... [more]
XP_023546643.12.5e-6182.47uncharacterized protein LOC111805697 [Cucurbita pepo subsp. pepo][more]
XP_022929580.15.7e-6181.82uncharacterized protein LOC111436123 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
O040232.3e-0432.26Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LKL31.1e-6283.12C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G076000 PE=4 SV=... [more]
A0A5D3BHX83.2e-6283.12Calcium-dependent lipid-binding (CaLB domain) family protein OS=Cucumis melo var... [more]
A0A1S3B4893.2e-6283.12uncharacterized protein LOC103485843 OS=Cucumis melo OX=3656 GN=LOC103485843 PE=... [more]
A0A6J1EUS22.7e-6181.82uncharacterized protein LOC111436123 OS=Cucurbita moschata OX=3662 GN=LOC1114361... [more]
A0A6J1K7751.0e-6081.17uncharacterized protein LOC111492275 OS=Cucurbita maxima OX=3661 GN=LOC111492275... [more]
Match NameE-valueIdentityDescription
AT2G33320.12.4e-4153.42Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT1G04540.12.6e-4052.47Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT2G13350.13.0e-3653.15Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT3G04360.18.2e-3450.66Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT4G01200.18.5e-2340.44Calcium-dependent lipid-binding (CaLB domain) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 9..124
e-value: 3.1E-7
score: 40.0
IPR000008C2 domainPFAMPF00168C2coord: 10..99
e-value: 2.3E-11
score: 43.9
IPR000008C2 domainPROSITEPS50004C2coord: 1..110
score: 11.231287
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 4..148
e-value: 1.0E-13
score: 53.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 9..138
NoneNo IPR availablePANTHERPTHR32246INGRESSION PROTEIN FIC1coord: 5..155
NoneNo IPR availablePANTHERPTHR32246:SF103CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEINcoord: 5..155
IPR044750SRC2/BAP, C2 domainCDDcd04051C2_SRC2_likecoord: 10..130
e-value: 7.92016E-40
score: 128.888

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021954.1MS021954.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response