MS021174 (gene) Bitter gourd (TR) v1

Overview


Name	MS021174
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	coiled-coil domain-containing protein 97
Location	scaffold192: 87526 .. 89834 (-)
RNA-Seq Expression	MS021174
Synteny	MS021174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAGAAGACGATGGAAACGACGACGGCGACGGCGACGGCGAAAAGATTGAGTGGCGAAGCCATGGATTGCTTATCGGAGAGGCTTTCATTGCAGGAGGATCTTTACTTTCCTCGCGCGCTTCAATCCACTGCCACAAATCCATCCCAGCGCAAGGCCATTCTACTCGACCTCCTTTCTCGCGATGCCGCTGTGTTTTTAGGTCTGTGTCCCTATTAAACTCTGGATTTTTGTAATTTTTGGTATGGATTTGTGTTGTATATGTTGATTGTTATACTGAAGTTAAAGCGCCCTAGCTTAATTTGTCGAATTGAAAATCTAGATTATATTTCTGTCGCTTGAAATATGCAAGGGATAAAATTTAGGTAAAAGAATTAGTAGTTTTATGCTCGTATTTGGTACGCGTTCTAGTCAGGAGATTTACTGGAAAGTATTAGAATCCCGAGTCCTATGGTTCAATTTAGCTCCCAGGATAATGGAGGAGAAGATGAAATTAGTTACATGGTAACAGTGAGCTCTGTAGTTTGTTTATTTATTTTGATATTTTTGGTTGTCATCTTTCCGAGTTGAAGAATGAAATAATGAATCCCAATTTATCAACACTCGTAAGATGTAAAATAGTAGTGTATTTAACTTATTGATGTGCGTGTCTGGGTGTTCTATGGTTTAGAGGAAGGAACAAGCTTCGATGCTTTACCACAACTATTATTTCTTTATAAAGAAATTTCCGTTTAGGTATTTTGTTTCACATCTTGTAAGCTATGCAGCTTATATAGACGAATCCATGGAGGGTCATCATTGATTAGTTTTTGAAATAATCTTTCTTTGTTCATGGTTCATAATTATATTTATGGTGTCCTAGGCGTAAGAAGAAAGAATTGAATATCTTGTTTGAGTTCCACACTTGGAAGTGAAGGAGGAAAACGTCTTTGGGCTTCATTTGAAGTTGATTCATAATATGTAGAAACTTTTTTGGTAACTATTTTGATTTTACTCCTTGGATGCTGGCTCTCTCTGTACATTTCAAGTATTCTAAGGTATGTTGCACCACCAAATTTGATTGATGTAGAACGATATGGATCACAGTTGACATCCAATGAGCTCCATGAGTTTGATACTCTTAAGGATGATTATGAGATAAATTGGCATTTAAAGCACCTTCGAAGTATAAAGAGTCCGACATCAGATGAACTACACTCTAGGTCAGTTATTGTGAAGAATAGAAGACGAGCCTATCTGAATAAATTGATATGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGAGAGAGAGCCATTTTTGCATCATGAGTATGTAGGGAAGTTTCAGGATCCAAGTGGTCGAGGAATGGCAAGACCAGGGGAGCGATGGTCTGAGACGCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCAAAGATCAGAGGAGAACAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGATAGGTAATGATGTAAACCAAGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGGGAGGAGAGGAAAGGTAACGAGCCTGCTAATGCTGCTCATTCCATGGAGGTAATTTCATGTCATCTTCAATGTTTTCGTTCCCTTTAAAATAACTTTGTATGAATTAGTTCGATTAACATCTACTTCTGATTGACTTGTTCGATAGGTTTTTAGATTATTCTTATATGCATTCCTTCCTTTTATTATGGCTTCAATAATTAAAACTAAAGTGGTGTGCACTTTCGTTTTTTCCTTATTCATAATCATGTCCTATCTATTTAGCTATTATCATATGGTTTTAATGCTTGTAGATTTCTTAAGATATTCATGTTTCGTATATCTGATCATTATGGACTGATCAGAATAAAGCATCTGAATATATTTTGATCTGCCGGGGATCTAATTTGCTCCAAATTAGATAGTGAGTTGTTTGATATAATTTGCTCCAAATTATATTTTATAGTGAGTTGTTTGATATTTGATGCTTTCACTTGTAGATATCTGCAGCCATGGATACTCAGAATGAAAAATCAGCAACTGACAATAGTGATGCTGCCGAGGGCGGGTCTAATCTTGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAATTTTTGTTGGGAGAAGACAATGAACATTTAGATTACTCAAAAATAGACAATGACGAGACCTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGACGAAGAT

mRNA sequence

CGAGAGAAGACGATGGAAACGACGACGGCGACGGCGACGGCGAAAAGATTGAGTGGCGAAGCCATGGATTGCTTATCGGAGAGGCTTTCATTGCAGGAGGATCTTTACTTTCCTCGCGCGCTTCAATCCACTGCCACAAATCCATCCCAGCGCAAGGCCATTCTACTCGACCTCCTTTCTCGCGATGCCGCTGTGTTTTTAGAACGATATGGATCACAGTTGACATCCAATGAGCTCCATGAGTTTGATACTCTTAAGGATGATTATGAGATAAATTGGCATTTAAAGCACCTTCGAAGTATAAAGAGTCCGACATCAGATGAACTACACTCTAGGTCAGTTATTGTGAAGAATAGAAGACGAGCCTATCTGAATAAATTGATATGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGAGAGAGAGCCATTTTTGCATCATGAGTATGTAGGGAAGTTTCAGGATCCAAGTGGTCGAGGAATGGCAAGACCAGGGGAGCGATGGTCTGAGACGCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCAAAGATCAGAGGAGAACAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGATAGGTAATGATGTAAACCAAGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGGGAGGAGAGGAAAGGTAACGAGCCTGCTAATGCTGCTCATTCCATGGAGATATCTGCAGCCATGGATACTCAGAATGAAAAATCAGCAACTGACAATAGTGATGCTGCCGAGGGCGGGTCTAATCTTGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAATTTTTGTTGGGAGAAGACAATGAACATTTAGATTACTCAAAAATAGACAATGACGAGACCTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGACGAAGAT

Coding sequence (CDS)

CGAGAGAAGACGATGGAAACGACGACGGCGACGGCGACGGCGAAAAGATTGAGTGGCGAAGCCATGGATTGCTTATCGGAGAGGCTTTCATTGCAGGAGGATCTTTACTTTCCTCGCGCGCTTCAATCCACTGCCACAAATCCATCCCAGCGCAAGGCCATTCTACTCGACCTCCTTTCTCGCGATGCCGCTGTGTTTTTAGAACGATATGGATCACAGTTGACATCCAATGAGCTCCATGAGTTTGATACTCTTAAGGATGATTATGAGATAAATTGGCATTTAAAGCACCTTCGAAGTATAAAGAGTCCGACATCAGATGAACTACACTCTAGGTCAGTTATTGTGAAGAATAGAAGACGAGCCTATCTGAATAAATTGATATGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGAGAGAGAGCCATTTTTGCATCATGAGTATGTAGGGAAGTTTCAGGATCCAAGTGGTCGAGGAATGGCAAGACCAGGGGAGCGATGGTCTGAGACGCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCAAAGATCAGAGGAGAACAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGATAGGTAATGATGTAAACCAAGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGGGAGGAGAGGAAAGGTAACGAGCCTGCTAATGCTGCTCATTCCATGGAGATATCTGCAGCCATGGATACTCAGAATGAAAAATCAGCAACTGACAATAGTGATGCTGCCGAGGGCGGGTCTAATCTTGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAATTTTTGTTGGGAGAAGACAATGAACATTTAGATTACTCAAAAATAGACAATGACGAGACCTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGACGAAGAT

Protein sequence

REKTMETTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED

Homology

[Close]

BLAST of MS021174 vs. NCBI nr
Match: XP_022155554.1 (coiled-coil domain-containing protein 97 [Momordica charantia])

HSP 1 Score: 612.8 bits (1579), Expect = 1.7e-171
Identity = 332/334 (99.40%), Postives = 332/334 (99.40%), Query Frame = 0


Query: 5   METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA 64
           METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA
Sbjct: 1   METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA 60

Query: 65  VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL 124
           VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL
Sbjct: 61  VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL 120

Query: 125 NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA 184
           NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA
Sbjct: 121 NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA 180

Query: 185 KIRGEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAA 244
           KIRGEQRRLGVAERDLIGNDVNQENG  EEEEEEEEEEEEEEEEEEEGEERKGNEPANAA
Sbjct: 181 KIRGEQRRLGVAERDLIGNDVNQENG--EEEEEEEEEEEEEEEEEEEGEERKGNEPANAA 240

Query: 245 HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN 304
           HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN
Sbjct: 241 HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN 300

Query: 305 EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 301 EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 332

[Close]

BLAST of MS021174 vs. NCBI nr
Match: KAG6596899.1 (hypothetical protein SDJN03_10079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 544.7 bits (1402), Expect = 5.8e-151
Identity = 293/327 (89.60%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSLQ+ LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLICDG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLICDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 183

Query: 192 RLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAAHSMEISA 251
           RLGVAERDL+GND+N    EEEEEEEEEEE+EEEEE+EE GE+ KG++ AN AHSME+S 
Sbjct: 184 RLGVAERDLVGNDLNPREEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAANGAHSMEVST 243

Query: 252 AMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSK 311
           AMD Q E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSK
Sbjct: 244 AMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSK 303

Query: 312 IDNDETLDDHWLREANDDAEEKYFDED 339
           IDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 304 IDNDETLDDHWLREANDDAEEKYFDED 330

[Close]

BLAST of MS021174 vs. NCBI nr
Match: KAG7030174.1 (hypothetical protein SDJN02_08521, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543.1 bits (1398), Expect = 1.7e-150
Identity = 295/331 (89.12%), Postives = 308/331 (93.05%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSLQ+ LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLICDG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLICDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 183

Query: 192 RLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEE----GEERKGNEPANAAHSM 251
           RLGVAERDL+GND+N    EEEEEEEEEEEEEEE+EEEEE    GE+ KG++ AN AHSM
Sbjct: 184 RLGVAERDLVGNDLNPREEEEEEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAANGAHSM 243

Query: 252 EISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHL 311
           E+S AMD Q E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQKFLLGEDNEHL
Sbjct: 244 EVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHL 303

Query: 312 DYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           DYSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 304 DYSKIDNDETLDDHWLREANDDAEEKYFDED 334

[Close]

BLAST of MS021174 vs. NCBI nr
Match: XP_022935567.1 (coiled-coil domain-containing protein 97 [Cucurbita moschata])

HSP 1 Score: 542.3 bits (1396), Expect = 2.9e-150
Identity = 294/330 (89.09%), Postives = 309/330 (93.64%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSLQ+ LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLICDG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLICDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 183

Query: 192 RLGVAERDLIGNDVN---QENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAAHSME 251
           RLGVAERDL+GND+N   +E  EEEEEEEEEEE+EEEEE+EE GE+ KG++ AN AHSME
Sbjct: 184 RLGVAERDLVGNDLNPREEEEEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAANGAHSME 243

Query: 252 ISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD 311
           +S AMD Q E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD
Sbjct: 244 VSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD 303

Query: 312 YSKIDNDETLDDHWLREANDDAEEKYFDED 339
           YSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 304 YSKIDNDETLDDHWLREANDDAEEKYFDED 333

[Close]

BLAST of MS021174 vs. NCBI nr
Match: XP_023539774.1 (coiled-coil domain-containing protein 97 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.9 bits (1387), Expect = 3.2e-149
Identity = 294/333 (88.29%), Postives = 308/333 (92.49%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSLQ+ LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLICDG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLICDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQD SGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDLSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 183

Query: 192 RLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEE------GEERKGNEPANAAH 251
           RLGVAERDL+GND+N +  EEEEEEEEEEEEEEEEE+EEE      GE+ KG++ AN AH
Sbjct: 184 RLGVAERDLVGNDLNPKEEEEEEEEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAANGAH 243

Query: 252 SMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNE 311
           SME+S AMD Q E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQKFLLGEDNE
Sbjct: 244 SMEVSTAMDNQQERSATDNNQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGEDNE 303

Query: 312 HLDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           HLDYSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 304 HLDYSKIDNDETLDDHWLREANDDAEEKYFDED 336

[Close]

BLAST of MS021174 vs. ExPASy Swiss-Prot
Match: Q96F63 (Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 86/302 (28.48%), Postives = 132/302 (43.71%), Query Frame = 0


Query: 50  QRKAILLDLLSRDAAVFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDEL 109
           ++ AIL  L      VFLER+ + L    L  F  ++ D+  +++   +    +     L
Sbjct: 91  EKVAILAQLYHEKPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTL 150

Query: 110 HSRSVIVKNRRRAYLNKLICDGQYFSEDAMREREPFLHHEYVGKF-------------QD 169
            +R   ++NRR A L +LI  G+YFS++ MR R P L+ +Y+G++             Q 
Sbjct: 151 RTR---LRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELSARTPTHQP 210

Query: 170 PSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDLIGNDVNQENGEEEEEE 229
           P      RP    S  L++  EE  L      +QR L                 +++EEE
Sbjct: 211 PKPGSPGRPACPLSNLLLQSYEEREL------QQRLL-----------------QQQEEE 270

Query: 230 EEEEEEEEEEEEEEEGEERKGNEPANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGA 289
           E   EEEEEEE+ +E ++R G +                         S+A    S    
Sbjct: 271 EACLEEEEEEEDSDEEDQRSGKD-------------------------SEAWVPDSEERL 330

Query: 290 TLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFD 339
            L E        +FT  MHQ+FL G+D +  DYS +D++   D+  L     D EE+YFD
Sbjct: 331 ILRE--------EFTSRMHQRFLDGKDGD-FDYSTVDDNPDFDN--LDIVARDEEERYFD 330

[Close]

BLAST of MS021174 vs. ExPASy TrEMBL
Match: A0A6J1DQL7 (coiled-coil domain-containing protein 97 OS=Momordica charantia OX=3673 GN=LOC111022667 PE=4 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 8.4e-172
Identity = 332/334 (99.40%), Postives = 332/334 (99.40%), Query Frame = 0


Query: 5   METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA 64
           METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA
Sbjct: 1   METTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAA 60

Query: 65  VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL 124
           VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL
Sbjct: 61  VFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYL 120

Query: 125 NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA 184
           NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA
Sbjct: 121 NKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVA 180

Query: 185 KIRGEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAA 244
           KIRGEQRRLGVAERDLIGNDVNQENG  EEEEEEEEEEEEEEEEEEEGEERKGNEPANAA
Sbjct: 181 KIRGEQRRLGVAERDLIGNDVNQENG--EEEEEEEEEEEEEEEEEEEGEERKGNEPANAA 240

Query: 245 HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN 304
           HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN
Sbjct: 241 HSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDN 300

Query: 305 EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 301 EHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 332

[Close]

BLAST of MS021174 vs. ExPASy TrEMBL
Match: A0A6J1F5X8 (coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111442400 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.4e-150
Identity = 294/330 (89.09%), Postives = 309/330 (93.64%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSLQ+ LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLICDG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLICDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 183

Query: 192 RLGVAERDLIGNDVN---QENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAAHSME 251
           RLGVAERDL+GND+N   +E  EEEEEEEEEEE+EEEEE+EE GE+ KG++ AN AHSME
Sbjct: 184 RLGVAERDLVGNDLNPREEEEEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAANGAHSME 243

Query: 252 ISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD 311
           +S AMD Q E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD
Sbjct: 244 VSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLD 303

Query: 312 YSKIDNDETLDDHWLREANDDAEEKYFDED 339
           YSKIDNDETLDDHWLREANDDAEEKYFDED
Sbjct: 304 YSKIDNDETLDDHWLREANDDAEEKYFDED 333

[Close]

BLAST of MS021174 vs. ExPASy TrEMBL
Match: A0A1S3BKG3 (coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.1e-145
Identity = 291/348 (83.62%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 8   TTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFL 67
           T  T  AK LS EAMDCLSERLSLQEDLYFPRALQSTA+NPSQRKAILLDLLSRD AVFL
Sbjct: 3   TAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFL 62

Query: 68  ERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKL 127
           ERYGSQLTSNELHEFD LKDDYEINWHLKHLRSIKSPTSDELH+RSVIVKNRRRAYL+KL
Sbjct: 63  ERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKL 122

Query: 128 ICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 187
           I DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR
Sbjct: 123 IYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 182

Query: 188 GEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERK----------- 247
           GEQRRLGVAERDL+GN+VNQ   EEEEEEEEEEEEEEEEEEE+E EE K           
Sbjct: 183 GEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEK 242

Query: 248 ------GNEPANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQF 307
                  N+P N   SME++ AMD Q+E+ AT+NS+ AEGGSN  ATLSEADMQDQMDQF
Sbjct: 243 EEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQF 302

Query: 308 TYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           TYIMHQKFLLGED+EHLDYSKIDNDETLDDHW+REANDDAEEKYFDED
Sbjct: 303 TYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350

[Close]

BLAST of MS021174 vs. ExPASy TrEMBL
Match: A0A6J1L293 (coiled-coil domain-containing protein 97 OS=Cucurbita maxima OX=3661 GN=LOC111498443 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.7e-145
Identity = 287/332 (86.45%), Postives = 304/332 (91.57%), Query Frame = 0


Query: 12  ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 71
           A AK LS EAMDCLSERLSL + LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 4   AAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63

Query: 72  SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 131
           SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLI DG
Sbjct: 64  SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIRDG 123

Query: 132 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 191
           QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQ 
Sbjct: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQL 183

Query: 192 RLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEE-----GEERKGNEPANAAHS 251
           RLGVAERDL+GND+N +  EEEEEEEEEE+EEEEE+EEEE     GE+ KG++ AN AHS
Sbjct: 184 RLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANGAHS 243

Query: 252 MEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEH 311
           ME+S A D Q+E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQK LLGED EH
Sbjct: 244 MEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGEDYEH 303

Query: 312 LDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           LDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 304 LDYSKIDNDETLDDHWLREANDDAEEKYFNED 335

[Close]

BLAST of MS021174 vs. ExPASy TrEMBL
Match: A0A5A7TDJ3 (YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00070 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 4.1e-134
Identity = 260/331 (78.55%), Postives = 272/331 (82.18%), Query Frame = 0


Query: 8   TTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFL 67
           T  T  AK LS EAMDCLSERLSLQEDLYFPRALQSTA+NPSQRKAILLDLLSRD AVFL
Sbjct: 3   TAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFL 62

Query: 68  ERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKL 127
           ERYGSQLTSNELHEFD LKDDYEINWHLKHLRSIKSPTSDELH+RSVIVKNRRRAYL+KL
Sbjct: 63  ERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKL 122

Query: 128 ICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 187
           I DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR
Sbjct: 123 IYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 182

Query: 188 GEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEPANAAHSM 247
           GEQRRLGVAERDL+GN+V +                                        
Sbjct: 183 GEQRRLGVAERDLVGNNVTR---------------------------------------- 242

Query: 248 EISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEHL 307
               AMD Q+E+ AT+NS+ AEGGSN  ATLSEADMQDQMDQFTYIMHQKFLLGED+EHL
Sbjct: 243 ----AMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDSEHL 289

Query: 308 DYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           DYSKIDNDETLDDHW+REANDDAEEKYFDED
Sbjct: 303 DYSKIDNDETLDDHWMREANDDAEEKYFDED 289

[Close]

BLAST of MS021174 vs. TAIR 10
Match: AT5G47090.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 339.7 bits (870), Expect = 2.6e-93
Identity = 207/338 (61.24%), Postives = 245/338 (72.49%), Query Frame = 0


Query: 1   REKTMETTTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLS 60
           ++KTME    T     + G A + ++ERLS  ++LYFPRA+Q TA +  QRK+ILLDLL 
Sbjct: 4   KKKTMEMEATT-----MKGTAAEDITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLR 63

Query: 61  RDAAVFLERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRR 120
           RD AVFLERYGS+L  +EL EFD +K DYE++WHLK+LR   SPTS+E+ SRSV V+NRR
Sbjct: 64  RDPAVFLERYGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRR 123

Query: 121 RAYLNKLICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEA 180
            AYLNKL+ +GQYFSEDAMR+REP+LHHEYVGKFQD  GR MARPGERWSETLMRR+EEA
Sbjct: 124 LAYLNKLVSEGQYFSEDAMRDREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEA 183

Query: 181 MLVAKIRGEQRRLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEEEEGEERKGNEP 240
           +LV +IR EQ+RLGV+E D +GN       E+ EE EEEEEEE EEEEEEE EE K   P
Sbjct: 184 VLVTRIREEQQRLGVSESDWVGN-------EKMEESEEEEEEESEEEEEEEDEEAK--NP 243

Query: 241 ANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLL 300
             A+ S   S     Q EK+ T               L   +MQD MDQFT IM QKFL 
Sbjct: 244 TEASSS---SLNGKEQKEKATT--------------VLPPEEMQDMMDQFTSIMEQKFLS 303

Query: 301 GEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 339
           GED++HLDY+KIDNDETLDDHWLRE   DAE+KYFDED
Sbjct: 304 GEDHQHLDYAKIDNDETLDDHWLREIGRDAEDKYFDED 310

The following BLAST results are available for this feature:

BLAST of MS021174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155554.1	1.7e-171	99.40	coiled-coil domain-containing protein 97 [Momordica charantia]	[more]
KAG6596899.1	5.8e-151	89.60	hypothetical protein SDJN03_10079, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030174.1	1.7e-150	89.12	hypothetical protein SDJN02_08521, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022935567.1	2.9e-150	89.09	coiled-coil domain-containing protein 97 [Cucurbita moschata]	[more]
XP_023539774.1	3.2e-149	88.29	coiled-coil domain-containing protein 97 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS021174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96F63	1.2e-05	28.48	Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 ...	[more]

BLAST of MS021174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQL7	8.4e-172	99.40	coiled-coil domain-containing protein 97 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1F5X8	1.4e-150	89.09	coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3BKG3	5.1e-145	83.62	coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832...	[more]
A0A6J1L293	6.7e-145	86.45	coiled-coil domain-containing protein 97 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A5A7TDJ3	4.1e-134	78.55	YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MS021174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47090.1	2.6e-93	61.24	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 202..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..234
IPR040233	Domain of unknown function DUF2052	PFAM	PF09747	DUF2052	coord: 118..338 e-value: 5.5E-51 score: 173.5
IPR018613	Ccdc97-like	PANTHER	PTHR31840	COILED-COIL DOMAIN-CONTAINING PROTEIN 97	coord: 8..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021174.1	MS021174.1	mRNA