MS020274 (gene) Bitter gourd (TR) v1

Overview


Name	MS020274
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-H2 finger protein ATL16-like
Location	scaffold665: 667861 .. 670721 (+)
RNA-Seq Expression	MS020274
Synteny	MS020274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCGGCGACATTTCCAAGGACCCATTGCCCCAACTTCTTGCTTCCCATTCATGGCTTCAGCTCTTCGACTACGAAGAACTCGATTCCTTTTGCCGCGCCCTTTAAATTTAAACCCACTTTCTTGAAATTTCAAGCGAAACCGGCCCGGTTGGTTGTACTTTGTTATCGGGATTCCGAGAAATCTGCCCGGTATGAAGAATCCGGTGATCGTGACTCGGAAGCTGTGGGGGTCGAACATTCGAATGGGCCTTTCATGGAGGAGAATAGAGAGCAAAACCAATGGAGCCTGGAAGTGGGAAGCCCTAGTGTTGGATTTCGGCCTCTGGCCAAATTGAGCTTCAGCGATAAGGCTTTTCTTCTCTTGACATTCATCGCGTTAACGGTAAATTTGAATTAGATCAATTTCTCTCTATATGTTGTGTGTTTGTGAATTTCTCCGAATTTTGGTAGTTGTCAGACTATGCTCTTCAGTCTTCCCTGAAGACTAAGGGTTTTATAACCTTGAGATTTGAGAATTATTGGTGGACATGCGGCCTTTTTGTTTTTGTTTTTTTTTTTCCCTCTTTCCTAGTTGATTGTTAGTAGTAGTTCTTAACAAATAGATTTTTTCTTGGTCTAACCGGTCCTCCAAAGTTTCTCCTAACAACGTTGGACTAATACTGATGCTAATTAACAGATCAATTGCTGATTATAGAGATGTTATTTTTTTAGTATCATACAATCATGTGTTAAATAAACTATATAACAAACTAATGAAAGCATGTTACCTTAGCTGATCGTTTCTAGATGGGTTTACTCTTACAAGTTACTTATTGTTCGAGACGGAGAGGAATAGGATAATCCTTAGGTGCATGGGTGTATTTCCATTGGTTCCATAGATGGAGATATAGCAGATATTTGTGATTATATGATTGGTATCTTTTATTTCAAAATCTAGAGTTGAGCTCTGGATTGAAAAATTACTTGAAGCTTTTAGTTGCCATGACTCCGTAAGGAGTTAATTGTTTGATATTGGGGCTAACGTGAGCATAACTTAGTGGTAATTGACACATTCTCCTTCTCGTGAGGTCGGAGGTTCAAACCTTCGTACCTCCAATTTGTTGTATTAAAAAATATATATGTCTATATATATACTTATTTGATACGGGGACATATCGAATTACCGGCTTTCATTTATTTGGTCATTGAGCATATGTATAAACATTGATTAGTGCTAATTGGTGCAGACTTCGGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTTATGTAAGTTCATTGATGACTATTTGAACTTTTAAGTTAAAATTAGCTTTCAGATACACTTTTGTGCCTTTTTTTTCTAATTTTATCCATATATTTTCTGAGTTCTCTTTATACAAATCCATGTATTAAACAAGAAAGTAGTCTAACAAGACAATTTGGGCCTAACATACTACTAACAATGTGATGAAGTATGAATCTGAGAGACATGGTTTTTGAAAAATGTAATGTAGGCAATGCGCAGAGCTGCTATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACCATGGCTGCCATTAGACTTTCAGGCATGGAAATCAGCGATCTCACTCTTGAACTAAGTGATCTAAGGTGAGAACCGATCCTTATCTAGGTCGTCTCTCCCTATTTGAATGTTTTGAGATGGGGCATTGTTTCTGTGACAAGCTGGATATCTTGTAGTTCTTTTGAATATTTGGTTCCAGAGAAATAGGGGTATTTTCTGGGTATTGAGAATGCTTGGGAGTAAGTCTGGGATGTGGCTCACTTTGATAGTCCTCTTTGCATCTTCATCATGAAAGATAGTCCTCTTTGCATTCATGTTCTGTAATTACCCTTTGCTTTTTAATCATAATGGTCAGAGTCCTATATCTTTCCCGTGGTTCCACTTGTGTTCTTGTATGGCCCTCTTTTGATTGTACTCTCATTCTTCTTAATAAAAGTGGTTTTTAAGCGGTTCAAGAGATCTATTTCTTGAGAACCAATCAGGAAACCAAGTGTAATGTTAAATCTTGTTCAGGTGGTTGTTCTCTTTAGCCTAATATACGATCATATCTGTTGTCACTACAAATAATATTCTTCATGGGGGCCACTGTAGAATGCGAAAACAGATGATAGCAATTTTTCTCTCACTTATATGGCTTTGAATCTTAGTCCCCAAGGGGCAGCCTTGTTGGCTAAAGCTTACGATCTCAGAATAATACCTATCCTGTAGTTGCATGTTTGAACCTTCGAGTAAACTTAATAAGATAAAAATCCTTGATGTCTCCGGGGTGTCCTGGATTAGTGGGGTGGGGCCCTTGATATAGATATATATATATATAGGCTTTGAATTTTATCGTATGTTTCTTGTGTCATTGTCTCCCCTTTTTGGGCAAGCACAATCATTCTGACTTTTCTAAGTAATCCATCTCCTTTCTGTTTTGAACGCAGTCAAGAAATAGCTGATGGGGTAAACAAATCTGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCAATTGCGCACCAACAAACTATGTGTATGTTTGACTACAAGCAATCTAATATTACTCATACTACATATTCTTATGACTAATCACCAGAGCTTAACAGCTTGTATTATGTTGTCCGCATGATTCAGCAATGATTGAAGAGAGAGCAAGCCTGCCCATTATTTCGTTGCAACCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCCGTTGGCCAAGCCACCCGAACCATCTTGAAAATGATCACAAGAGGAGAAAGTACGGAGAATGAGGATGATAATAGTATAGATAGACTGGAAGTT

mRNA sequence

ATGAGATCGGCGACATTTCCAAGGACCCATTGCCCCAACTTCTTGCTTCCCATTCATGGCTTCAGCTCTTCGACTACGAAGAACTCGATTCCTTTTGCCGCGCCCTTTAAATTTAAACCCACTTTCTTGAAATTTCAAGCGAAACCGGCCCGGTTGGTTGTACTTTGTTATCGGGATTCCGAGAAATCTGCCCGGTATGAAGAATCCGGTGATCGTGACTCGGAAGCTGTGGGGGTCGAACATTCGAATGGGCCTTTCATGGAGGAGAATAGAGAGCAAAACCAATGGAGCCTGGAAGTGGGAAGCCCTAGTGTTGGATTTCGGCCTCTGGCCAAATTGAGCTTCAGCGATAAGGCTTTTCTTCTCTTGACATTCATCGCGTTAACGACTTCGGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTTATGCAATGCGCAGAGCTGCTATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACCATGGCTGCCATTAGACTTTCAGGCATGGAAATCAGCGATCTCACTCTTGAACTAAGTGATCTAAGTCAAGAAATAGCTGATGGGGTAAACAAATCTGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCAATTGCGCACCAACAAACTATGTCAATGATTGAAGAGAGAGCAAGCCTGCCCATTATTTCGTTGCAACCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCCGTTGGCCAAGCCACCCGAACCATCTTGAAAATGATCACAAGAGGAGAAAGTACGGAGAATGAGGATGATAATAGTATAGATAGACTGGAAGTT

Coding sequence (CDS)

ATGAGATCGGCGACATTTCCAAGGACCCATTGCCCCAACTTCTTGCTTCCCATTCATGGCTTCAGCTCTTCGACTACGAAGAACTCGATTCCTTTTGCCGCGCCCTTTAAATTTAAACCCACTTTCTTGAAATTTCAAGCGAAACCGGCCCGGTTGGTTGTACTTTGTTATCGGGATTCCGAGAAATCTGCCCGGTATGAAGAATCCGGTGATCGTGACTCGGAAGCTGTGGGGGTCGAACATTCGAATGGGCCTTTCATGGAGGAGAATAGAGAGCAAAACCAATGGAGCCTGGAAGTGGGAAGCCCTAGTGTTGGATTTCGGCCTCTGGCCAAATTGAGCTTCAGCGATAAGGCTTTTCTTCTCTTGACATTCATCGCGTTAACGACTTCGGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTTATGCAATGCGCAGAGCTGCTATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACCATGGCTGCCATTAGACTTTCAGGCATGGAAATCAGCGATCTCACTCTTGAACTAAGTGATCTAAGTCAAGAAATAGCTGATGGGGTAAACAAATCTGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCAATTGCGCACCAACAAACTATGTCAATGATTGAAGAGAGAGCAAGCCTGCCCATTATTTCGTTGCAACCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCCGTTGGCCAAGCCACCCGAACCATCTTGAAAATGATCACAAGAGGAGAAAGTACGGAGAATGAGGATGATAATAGTATAGATAGACTGGAAGTT

Protein sequence

MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDSEKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAFLLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQPVVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV

Homology

[Close]

BLAST of MS020274 vs. NCBI nr
Match: XP_022146053.1 (RING-H2 finger protein ATL16-like [Momordica charantia])

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-113
Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVV CYRDS
Sbjct: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVFCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSARYEESGDRDSEAVGVEHSNGPFMEEN EQNQWSLEVGSPSVGFRPLAKLSFSDKAF
Sbjct: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENTEQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMI 228
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMS +
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSFL 227

[Close]

BLAST of MS020274 vs. NCBI nr
Match: KAG6606380.1 (hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036320.1 hypothetical protein SDJN02_03123 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-110
Identity = 229/283 (80.92%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATF +THCP   LP+HGFSSS TKNSI    P KF+P     +AKPAR +VLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPSKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSA  ++S       VGVE SNG    EN EQNQWS+EVGSPS GF PLAKLS SDKAF
Sbjct: 61  EKSALEQQS-------VGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LL TF+ALTTSVAFTSLVIAAVPT  AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLFTFVALTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMIEERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VV GAAKKTSRAVG+ATRTI+KMI+ GESTEN+DDNS+DRLEV
Sbjct: 241 VVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of MS020274 vs. NCBI nr
Match: XP_022931045.1 (uncharacterized protein LOC111437355 [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 6.0e-109
Identity = 227/283 (80.21%), Postives = 243/283 (85.87%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATF +THCP   LP+HGFSSS TKNSI    P KF+P     +AKPAR +VLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSA  ++S       VGVE S+G    EN EQNQWS+E+GSPS GF PLAKLS SDKAF
Sbjct: 61  EKSALEQQS-------VGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LL TFIAL TSVAFTSLVIAAVPT  AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLFTFIALATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMIEERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VV GAAKKTSRAVG+ATRTI+KMI+ GESTEN+DDNS+DRLEV
Sbjct: 241 VVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of MS020274 vs. NCBI nr
Match: XP_038889010.1 (uncharacterized protein LOC120078775 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 226/283 (79.86%), Postives = 246/283 (86.93%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSAT    H P F LP+HGF+SST+KN I F +  KFKPTF   +AKP RLVV CYRDS
Sbjct: 1   MRSATL--LHSPFFFLPVHGFTSSTSKNPILFVSHCKFKPTFFNLRAKPDRLVVFCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKS        RD ++VGVE SNG  MEEN E+NQW++EVGSP VGFR L +L+ SDKAF
Sbjct: 61  EKSV-------RDEQSVGVEDSNGALMEENVERNQWNVEVGSPGVGFRSLPRLNLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LLLTFIALTTSVAFTSLVIAAVPTL AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLLTFIALTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMI+ERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VVAGAAKKTSRAVG+ATRTI+KMI+ GE+ EN+DDNS+DRLEV
Sbjct: 241 VVAGAAKKTSRAVGKATRTIMKMISGGENMENDDDNSLDRLEV 274

[Close]

BLAST of MS020274 vs. NCBI nr
Match: XP_023533033.1 (uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 225/283 (79.51%), Postives = 242/283 (85.51%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATF +THCP   LP+HGFS S TKNS     P KF+P     +AKPAR +VLCYRDS
Sbjct: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSA  ++S       +GVE SNG    EN EQNQWS+EVGSPS GF PLAKLS +DKAF
Sbjct: 61  EKSALEQQS-------LGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LL TFIALTTSVAFTSLVIAAVPT  AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLFTFIALTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLS+EIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMIEERASLPIISLQP
Sbjct: 181 SDLTLELSDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VV GAAKKTSRAVG+ATRTI+KMI+ GESTEN+DDNS+DRLEV
Sbjct: 241 VVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of MS020274 vs. ExPASy TrEMBL
Match: A0A6J1CXJ5 (RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.7e-114
Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVV CYRDS
Sbjct: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVFCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSARYEESGDRDSEAVGVEHSNGPFMEEN EQNQWSLEVGSPSVGFRPLAKLSFSDKAF
Sbjct: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENTEQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMI 228
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMS +
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSFL 227

[Close]

BLAST of MS020274 vs. ExPASy TrEMBL
Match: A0A6J1EYE8 (uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC111437355 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.9e-109
Identity = 227/283 (80.21%), Postives = 243/283 (85.87%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATF +THCP   LP+HGFSSS TKNSI    P KF+P     +AKPAR +VLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSA  ++S       VGVE S+G    EN EQNQWS+E+GSPS GF PLAKLS SDKAF
Sbjct: 61  EKSALEQQS-------VGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LL TFIAL TSVAFTSLVIAAVPT  AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLFTFIALATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMIEERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VV GAAKKTSRAVG+ATRTI+KMI+ GESTEN+DDNS+DRLEV
Sbjct: 241 VVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of MS020274 vs. ExPASy TrEMBL
Match: A0A6J1K868 (uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.5e-107
Identity = 224/283 (79.15%), Postives = 239/283 (84.45%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSAT  +THCP   LP+HGFS S TKNS     P KF+P     +AKPAR +VLCYRDS
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKSA  ++S       VGVE SNG    EN EQNQWS+EVGSPS GF PLAK S SDKAF
Sbjct: 61  EKSALEQQS-------VGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LL TFIALT SVAFTSLVIAAVPT  AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLFTFIALTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMI+ERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VV GAAKKTSRAVG+ATRTI+KMI+ GESTEN+DDNS+DRLEV
Sbjct: 241 VVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of MS020274 vs. ExPASy TrEMBL
Match: A0A6J1HHL4 (uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC111464126 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.7e-104
Identity = 223/283 (78.80%), Postives = 242/283 (85.51%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MRSATF    CP FLLP+HGFSSST+KNSI      KFKPTF   +AKPARLVV C RDS
Sbjct: 1   MRSATF--LCCPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARLVVFCCRDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           EKS R E+S       VG++ SN   ME+N E+ QW+ EVG PSVGF+PLAKLS SDKA 
Sbjct: 61  EKSVRNEQS-------VGIDDSNRALMEKNIERMQWNEEVGCPSVGFQPLAKLSLSDKAS 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LLLTFIALT SVAFTSLVIAAVPTL AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLLTFIALTASVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMI+ERA LP+ISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VVAGAAKKTSRAVG+ATRTI+KMI+ GES EN+DDNS+DRLEV
Sbjct: 241 VVAGAAKKTSRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]

BLAST of MS020274 vs. ExPASy TrEMBL
Match: A0A5D3DAC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001000 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.8e-103
Identity = 217/283 (76.68%), Postives = 242/283 (85.51%), Query Frame = 0


Query: 1   MRSATFPRTHCPNFLLPIHGFSSSTTKNSIPFAAPFKFKPTFLKFQAKPARLVVLCYRDS 60
           MR++TF   H   FL P+ GF+ ST+K SI F AP KFKP F   +AKP RLVV CY DS
Sbjct: 1   MRTSTF--LHSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRLVVFCYGDS 60

Query: 61  EKSARYEESGDRDSEAVGVEHSNGPFMEENREQNQWSLEVGSPSVGFRPLAKLSFSDKAF 120
           E+S        RD +++GVE SN   +EEN E+N+W++E+G+PSVGF+ L KLS SDKAF
Sbjct: 61  ERSV-------RDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAF 120

Query: 121 LLLTFIALTTSVAFTSLVIAAVPTLYAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180
           LLLTFIALTTSVAFTSLVIAAVPTL AMRRAAISLSKLADTAREELPGTMAAIRLSGMEI
Sbjct: 121 LLLTFIALTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEI 180

Query: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGAIAHQQTMSMIEERASLPIISLQP 240
           SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGA+AHQQTMSMI+ERASLPIISLQP
Sbjct: 181 SDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQP 240

Query: 241 VVAGAAKKTSRAVGQATRTILKMITRGESTENEDDNSIDRLEV 284
           VVAGAAKKTS AVG+ATRTI+KMI+ GES EN+DDNS+DRLEV
Sbjct: 241 VVAGAAKKTSHAVGKATRTIMKMISGGESVENDDDNSLDRLEV 274

[Close]

BLAST of MS020274 vs. TAIR 10
Match: AT1G08530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-58
Identity = 127/181 (70.17%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 94  NQWSLEVGSPSV--GFRPLAKLSFSDKAFLLLTFIALTTSVAFTSLVIAAVPTLYAMRRA 153
           N   ++VGSP       PLAKLS SD+AFLLL FI  TTSVAFTSLVI A+PTL AM RA
Sbjct: 77  NNLKMQVGSPISLHSINPLAKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAMGRA 136

Query: 154 AISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAG 213
           A S +KLADTAR+ELP T+AA+RLSGMEISDLTLELSDLSQ+I DG+NKSA+AVQAAEAG
Sbjct: 137 ATSFAKLADTARKELPSTLAAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAAEAG 196

Query: 214 IRQIGAIAHQQTMSMIEERASLPIISLQPVVAGAAKKTSRAVGQATRTILKMITRGESTE 273
           I+QIG +A QQT+SMIEERA+LP ISLQPVVAGAA+KTS A+G AT+ ++ +IT G   E
Sbjct: 197 IKQIGTLAQQQTLSMIEERANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITGGNKDE 256

[Close]

BLAST of MS020274 vs. TAIR 10
Match: AT5G09995.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 88  EENREQNQWSLEVGSPSVGFRPLAKLSFSDKAFLLLTFIALTTSVAFTSLVIAAVPTLYA 147
           +E    +Q +  VG P +    L++ +F+ K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 148 MRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQA 207
            ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 208 AEAGIRQIGAIAHQQTMSMIEERASLPIISLQPVVAGAAKKTSRAV--GQATRTILKMIT 267
           AE  +R+   + +    SM E          +P++A  A+     V  G++   +   IT
Sbjct: 187 AEDRLRR---LTNMNPASMQEVMRQTKTDETEPMLAKQARSFREGVVKGRSLWQLFSTIT 241

[Close]

BLAST of MS020274 vs. TAIR 10
Match: AT5G09995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21
Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 88  EENREQNQWSLEVGSPSVGFRPLAKLSFSDKAFLLLTFIALTTSVAFTSLVIAAVPTLYA 147
           +E    +Q +  VG P +    L++ +F+ K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 148 MRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQA 207
            ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 208 AEAGIRQI 216
           AE  +R++
Sbjct: 187 AEDRLRRL 191

[Close]

BLAST of MS020274 vs. TAIR 10
Match: AT5G09995.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 3.8e-21
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 88  EENREQNQWSLEVGSPSVGFRPLAKLSFSDKAFLLLTFIALTTSVAFTSLVIAAVPTLYA 147
           +E    +Q +  VG P +    L++ +F+ K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 148 MRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQA 207
            ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 208 AEAGIRQIGAIAHQQTMSMIEERASLPIISLQPVVAGAAKKTSRAV--GQATRTILKMIT 267
           AE  +R++  +      SM E          +P++A  A+     V  G++   +   IT
Sbjct: 187 AEDRLRRLTNM--NPVASMQEVMRQTKTDETEPMLAKQARSFREGVVKGRSLWQLFSTIT 242

The following BLAST results are available for this feature:

BLAST of MS020274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146053.1	1.4e-113	98.24	RING-H2 finger protein ATL16-like [Momordica charantia]	[more]
KAG6606380.1	2.4e-110	80.92	hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931045.1	6.0e-109	80.21	uncharacterized protein LOC111437355 [Cucurbita moschata]	[more]
XP_038889010.1	2.3e-108	79.86	uncharacterized protein LOC120078775 [Benincasa hispida]	[more]
XP_023533033.1	2.3e-108	79.51	uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS020274 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS020274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXJ5	6.7e-114	98.24	RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355...	[more]
A0A6J1EYE8	2.9e-109	80.21	uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K868	3.5e-107	79.15	uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526...	[more]
A0A6J1HHL4	3.7e-104	78.80	uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC1114641...	[more]
A0A5D3DAC3	1.8e-103	76.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS020274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08530.1	1.8e-58	70.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G09995.3	1.3e-21	39.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.1	1.7e-21	47.66	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.2	3.8e-21	39.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85
None	No IPR available	PANTHER	PTHR33825	CHITINASE-LIKE PROTEIN	coord: 37..283
None	No IPR available	PANTHER	PTHR33825:SF14	CHITINASE-LIKE PROTEIN	coord: 37..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020274.1	MS020274.1	mRNA