MS020020 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TACAGTTTTTCAGTTGGTGATGTGATATGGGTCAAGACCAAAAGTCAGACATGGTGGCCTGGAAAGATATATGAACCCTCAGATGCTTTGAAAAGTGATGAAAGTGGCCAGAGTGATGGTCTATTAGTTGGCTATTTTGGGAGCAGCCATATGACATGGTGTTCTCCATCTCAGTTGATGCCGTTTGTTGAAAACTTTGAGCAGATGTCTGCGAAATACAAGTCTCGAAGCTTCCTTGGAGCTGTAGAGAAAGCTGTGGATGAGTTTGGCAGGTGCGTGAAGATGGAGATGACATGTTCGTGT TACAGTTTTTCAGTTGGTGATGTGATATGGGTCAAGACCAAAAGTCAGACATGGTGGCCTGGAAAGATATATGAACCCTCAGATGCTTTGAAAAGTGATGAAAGTGGCCAGAGTGATGGTCTATTAGTTGGCTATTTTGGGAGCAGCCATATGACATGGTGTTCTCCATCTCAGTTGATGCCGTTTGTTGAAAACTTTGAGCAGATGTCTGCGAAATACAAGTCTCGAAGCTTCCTTGGAGCTGTAGAGAAAGCTGTGGATGAGTTTGGCAGGTGCGTGAAGATGGAGATGACATGTTCGTGT TACAGTTTTTCAGTTGGTGATGTGATATGGGTCAAGACCAAAAGTCAGACATGGTGGCCTGGAAAGATATATGAACCCTCAGATGCTTTGAAAAGTGATGAAAGTGGCCAGAGTGATGGTCTATTAGTTGGCTATTTTGGGAGCAGCCATATGACATGGTGTTCTCCATCTCAGTTGATGCCGTTTGTTGAAAACTTTGAGCAGATGTCTGCGAAATACAAGTCTCGAAGCTTCCTTGGAGCTGTAGAGAAAGCTGTGGATGAGTTTGGCAGGTGCGTGAAGATGGAGATGACATGTTCGTGT YSFSVGDVIWVKTKSQTWWPGKIYEPSDALKSDESGQSDGLLVGYFGSSHMTWCSPSQLMPFVENFEQMSAKYKSRSFLGAVEKAVDEFGRCVKMEMTCSC Homology
BLAST of MS020020 vs. NCBI nr
Match: XP_022137145.1 (serine/threonine-protein kinase ATM [Momordica charantia] >XP_022137146.1 serine/threonine-protein kinase ATM [Momordica charantia] >XP_022137147.1 serine/threonine-protein kinase ATM [Momordica charantia] >XP_022137148.1 serine/threonine-protein kinase ATM [Momordica charantia]) HSP 1 Score: 216.9 bits (551), Expect = 8.3e-53 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MS020020 vs. NCBI nr
Match: XP_022994555.1 (serine/threonine-protein kinase ATM-like [Cucurbita maxima] >XP_022994557.1 serine/threonine-protein kinase ATM-like [Cucurbita maxima]) HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS020020 vs. NCBI nr
Match: XP_023541720.1 (serine/threonine-protein kinase ATM-like [Cucurbita pepo subsp. pepo] >XP_023541721.1 serine/threonine-protein kinase ATM-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 85/99 (85.86%), Postives = 92/99 (92.93%), Query Frame = 0
BLAST of MS020020 vs. NCBI nr
Match: XP_022954751.1 (serine/threonine-protein kinase ATM-like [Cucurbita moschata] >XP_022954752.1 serine/threonine-protein kinase ATM-like [Cucurbita moschata]) HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42 Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS020020 vs. NCBI nr
Match: KAG7012246.1 (Serine/threonine-protein kinase ATM, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42 Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS020020 vs. ExPASy Swiss-Prot
Match: Q9M3G7 (Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana OX=3702 GN=ATM PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13 Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of MS020020 vs. ExPASy Swiss-Prot
Match: Q96N64 (PWWP domain-containing protein 2A OS=Homo sapiens OX=9606 GN=PWWP2A PE=1 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05 Identity = 32/96 (33.33%), Postives = 46/96 (47.92%), Query Frame = 0
BLAST of MS020020 vs. ExPASy Swiss-Prot
Match: A0A1L8GR68 (PWWP domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=pwwp2a PE=3 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05 Identity = 27/90 (30.00%), Postives = 43/90 (47.78%), Query Frame = 0
BLAST of MS020020 vs. ExPASy Swiss-Prot
Match: F7AQ22 (PWWP domain-containing protein 2A OS=Xenopus tropicalis OX=8364 GN=pwwp2a PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 1.8e-05 Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS020020 vs. ExPASy Swiss-Prot
Match: Q8T079 (Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster OX=7227 GN=Ndf PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.6e-04 Identity = 26/86 (30.23%), Postives = 43/86 (50.00%), Query Frame = 0
BLAST of MS020020 vs. ExPASy TrEMBL
Match: A0A6J1C5U6 (serine/threonine-protein kinase ATM OS=Momordica charantia OX=3673 GN=LOC111008692 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.0e-53 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MS020020 vs. ExPASy TrEMBL
Match: A0A6J1K1K3 (serine/threonine-protein kinase ATM-like OS=Cucurbita maxima OX=3661 GN=LOC111490244 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS020020 vs. ExPASy TrEMBL
Match: A0A6J1GRS5 (serine/threonine-protein kinase ATM-like OS=Cucurbita moschata OX=3662 GN=LOC111456912 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.4e-43 Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS020020 vs. ExPASy TrEMBL
Match: A0A6J1E7M4 (serine/threonine-protein kinase ATM-like OS=Cucurbita moschata OX=3662 GN=LOC111431540 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41 Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of MS020020 vs. ExPASy TrEMBL
Match: A0A6J1KNA0 (uncharacterized protein LOC111495043 OS=Cucurbita maxima OX=3661 GN=LOC111495043 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.0e-41 Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of MS020020 vs. TAIR 10
Match: AT5G40340.1 (Tudor/PWWP/MBT superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 0
BLAST of MS020020 vs. TAIR 10
Match: AT3G27860.1 (Tudor/PWWP/MBT superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 2.7e-17 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of MS020020 vs. TAIR 10
Match: AT3G05430.1 (Tudor/PWWP/MBT superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of MS020020 vs. TAIR 10
Match: AT5G02950.1 (Tudor/PWWP/MBT superfamily protein ) HSP 1 Score: 79.0 bits (193), Expect = 2.5e-15 Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0
BLAST of MS020020 vs. TAIR 10
Match: AT3G09670.1 (Tudor/PWWP/MBT superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 4.7e-14 Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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