MS019205 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC VFDMSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGMAVSAVGSILGCGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR Homology
BLAST of MS019205 vs. NCBI nr
Match: XP_022156092.1 (uncharacterized protein LOC111023063 [Momordica charantia]) HSP 1 Score: 321.2 bits (822), Expect = 5.4e-84 Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of MS019205 vs. NCBI nr
Match: KAA0031767.1 (uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67 Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0
BLAST of MS019205 vs. NCBI nr
Match: XP_008457431.1 (PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncharacterized protein E5676_scaffold194G001760 [Cucumis melo var. makuwa]) HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67 Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of MS019205 vs. NCBI nr
Match: XP_011658339.1 (uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharacterized protein LOC116403759 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67 Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of MS019205 vs. NCBI nr
Match: XP_022970573.1 (uncharacterized protein LOC111469508 [Cucurbita maxima]) HSP 1 Score: 262.3 bits (669), Expect = 3.0e-66 Identity = 138/172 (80.23%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A6J1DR42 (uncharacterized protein LOC111023063 OS=Momordica charantia OX=3673 GN=LOC111023063 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84 Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A5A7SQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00060 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 5.9e-68 Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0
BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A5D3BFZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001760 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67 Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A0A0LV03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67 Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A1S3C532 (uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67 Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of MS019205 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 ) HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40 Identity = 95/178 (53.37%), Postives = 125/178 (70.22%), Query Frame = 0
BLAST of MS019205 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31 Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 0
BLAST of MS019205 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27 Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0
BLAST of MS019205 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27 Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0
BLAST of MS019205 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 6.3e-22 Identity = 68/173 (39.31%), Postives = 103/173 (59.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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