MS019205 (gene) Bitter gourd (TR) v1

Overview
NameMS019205
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMaternal effect embryo arrest
Locationscaffold554: 1294 .. 1824 (-)
RNA-Seq ExpressionMS019205
SyntenyMS019205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC

mRNA sequence

GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC

Coding sequence (CDS)

GTATTTGACATGTCCGGCGGGCGATTCACATCCACCAGAATCCACGTCATGGCTCTCGACGGCGTCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTCGGCGTTGCCTGGTACCCCACCGCCGACCCCGCCGCCAACCTTCTCGCCGACGATGACGACGGGCCGTGCGCCGCCGGGGCCGCTGTGGCCGAGAGCCTCATCGCCTGCCACGTGTACTCGTTCAGCTGCTTCCTCTTCTCCAGCCTGGTGGCGTCGGCGCTGAAGCAGGCCATCCGAATAAGCAGAGGTGGCGGCGAGGCTGTGGCGCACGCGCTGGGGCTGCGCGTGGGGATGGCGGTGTCGGCGGTGGGGTCGATTCTCGGGTGCGGGTTCTTGGTGGTGGCACTGCTGAATTTGGTTCAGATAAAGCTTGGGAAGTTCGGGTGCGGTCGGTGGGAGACGGCGGCCGCCGCCGTCCCGTTGATCACTTTGGTTCCTTCCGCGCTGTTCATCTACATTGCCCTTGTCCTTCATGCCTTCACACGC

Protein sequence

VFDMSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGMAVSAVGSILGCGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR
Homology
BLAST of MS019205 vs. NCBI nr
Match: XP_022156092.1 (uncharacterized protein LOC111023063 [Momordica charantia])

HSP 1 Score: 321.2 bits (822), Expect = 5.4e-84
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0

Query: 4   MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAA 63
           MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAA AA
Sbjct: 1   MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAARAA 60

Query: 64  VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGMAVSAVGSILG 123
           VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVG+ VSAVGSILG
Sbjct: 61  VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGIVVSAVGSILG 120

Query: 124 CGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           CGFLV ALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLH+FTR
Sbjct: 121 CGFLVAALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHSFTR 174

BLAST of MS019205 vs. NCBI nr
Match: KAA0031767.1 (uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VA++
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAQN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIRI  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATVLRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AAAVPL++LVPSALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPSALFIYIALVIHAFTR 179

BLAST of MS019205 vs. NCBI nr
Match: XP_008457431.1 (PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncharacterized protein E5676_scaffold194G001760 [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VA++
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAQN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIRI  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AAAVPL++LVP ALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

BLAST of MS019205 vs. NCBI nr
Match: XP_011658339.1 (uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharacterized protein LOC116403759 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VAE+
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAEN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIR+  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNL+QIKLG FGC RWET AAAVPL++LVP ALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

BLAST of MS019205 vs. NCBI nr
Match: XP_022970573.1 (uncharacterized protein LOC111469508 [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 3.0e-66
Identity = 138/172 (80.23%), Postives = 145/172 (84.30%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R +STRIHVMALDG+VNVNSLFTFAVFLG+ WYPTADP  NLL DDDDGPCA  AA A+S
Sbjct: 8   RSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAPAAAAAQS 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRI--SRGGGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSLVASALKQAIRI  S  GG    HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AA VPL++LVP ALFIYI LVLHAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 179

BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A6J1DR42 (uncharacterized protein LOC111023063 OS=Momordica charantia OX=3673 GN=LOC111023063 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0

Query: 4   MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAA 63
           MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAA AA
Sbjct: 1   MSGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAARAA 60

Query: 64  VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGMAVSAVGSILG 123
           VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVG+ VSAVGSILG
Sbjct: 61  VAESLIACHVYSFSCFLFSSLVASALKQAIRISRGGGEAVAHALGLRVGIVVSAVGSILG 120

Query: 124 CGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           CGFLV ALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLH+FTR
Sbjct: 121 CGFLVAALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHSFTR 174

BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A5A7SQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00060 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.9e-68
Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VA++
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAQN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIRI  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATVLRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AAAVPL++LVPSALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPSALFIYIALVIHAFTR 179

BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A5D3BFZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001760 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VA++
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAQN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIRI  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AAAVPL++LVP ALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A0A0LV03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VAE+
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAEN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIR+  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNL+QIKLG FGC RWET AAAVPL++LVP ALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

BLAST of MS019205 vs. ExPASy TrEMBL
Match: A0A1S3C532 (uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 8   RFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAES 67
           R TSTRIH++ALDG+VNVNSLFTFAVFLGVAWYPTA+PAANLL DDDDGPCAA  +VA++
Sbjct: 8   RSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAQN 67

Query: 68  LIACHVYSFSCFLFSSLVASALKQAIRISRG--GGEAVAHALGLRVGMAVSAVGSILGCG 127
           LIACHVYSFSCFLFSSL+ASALKQAIRI  G  GG+   HA  LRVGM  SAVGS+LGCG
Sbjct: 68  LIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAVGSVLGCG 127

Query: 128 FLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           FLV ALLNLVQIKLG FGC RWET AAAVPL++LVP ALFIYIALV+HAFTR
Sbjct: 128 FLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

BLAST of MS019205 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 95/178 (53.37%), Postives = 125/178 (70.22%), Query Frame = 0

Query: 11  STRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAESLIA 70
           +T IH+ ALDG+VNVNSLFT AVF+G+AW PT DP  +L+ D +   C   A +AE+L+A
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPT-DPDNSLVTDPN---CVPTARMAENLVA 61

Query: 71  CHVYSFSCFLFSSLVASALKQAIRISRGGGEAVA----------HALGLRVGMAVSAVGS 130
            HVYSF+ FLFSSL+A  LKQA+R++      ++          +   LR GM  S +GS
Sbjct: 62  FHVYSFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGS 121

Query: 131 ILGCGFLVVALLNLVQIKLGKFGCG-RWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
           + GCGFL++AL+N+VQIKLG  GCG    T AA VPL+ LVPSALFIY++L+L+AFTR
Sbjct: 122 VCGCGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAFTR 175

BLAST of MS019205 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31
Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 0

Query: 11  STRIHVMALDGVVNVNSLFTFAVFLGVA-----WYPTADPAANLLADDDDGPC--AAGAA 70
           +T IHV A+DG+VNVNSLF+ A+FLG+       +P +  A+    +     C  A G A
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASE---NHHLRRCISAKGPA 77

Query: 71  VAESLIACHVYSFSCFLFSSLVASALKQAIRISR---------------GGGEAVAHALG 130
           +AE L++ HVYSFS FLFSSL+A +LKQAIR +                  GE   +   
Sbjct: 78  LAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAA 137

Query: 131 LRVGMAVSAVGSILGCGFLVVALLNLVQIKLGKFGCGR-WETAAAAVPLITLVPSALFIY 176
           LRVG+  S V S+LGCGFL +AL++LVQIKLG   C R +   AA VPL+ LVPSAL IY
Sbjct: 138 LRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIY 197

BLAST of MS019205 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0

Query: 5   SGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAV 64
           S     +T +HV ALDG+VNVNSLFT AVF+G++    A P  + L  +    C A A V
Sbjct: 17  STSSLATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDASADV 76

Query: 65  AESLIACHVYSFSCFLFSSLVASALKQAIRI--SRGGGEAVAHALGLRV---GMAVSAVG 124
           A+ L+   V SFS FLFSSLVA  LK A+ +  S+   E     + ++V   GM  SAVG
Sbjct: 77  AKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVG 136

Query: 125 SILGCGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAF 176
           S++GC FL+++++N++QI+LG   CG    A A   L+TLV SAL IYI+  ++AF
Sbjct: 137 SVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

BLAST of MS019205 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0

Query: 5   SGGRFTSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAV 64
           S     +T +HV ALDG+VNVNSLFT AVF+G++    A P  + L  +    C A A V
Sbjct: 17  STSSLATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDASADV 76

Query: 65  AESLIACHVYSFSCFLFSSLVASALKQAIRI--SRGGGEAVAHALGLRV---GMAVSAVG 124
           A+ L+   V SFS FLFSSLVA  LK A+ +  S+   E     + ++V   GM  SAVG
Sbjct: 77  AKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVG 136

Query: 125 SILGCGFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAF 176
           S++GC FL+++++N++QI+LG   CG    A A   L+TLV SAL IYI+  ++AF
Sbjct: 137 SVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

BLAST of MS019205 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 6.3e-22
Identity = 68/173 (39.31%), Postives = 103/173 (59.54%), Query Frame = 0

Query: 10  TSTRIHVMALDGVVNVNSLFTFAVFLGVAWYPTADPAANLLADDDDGPCAAGAAVAESLI 69
           ++T +HV ALDG+V+ NSLFT AVF+G+++   +D     L   D   C+AG  V   L+
Sbjct: 24  STTSVHVTALDGIVSANSLFTVAVFVGISFDQPSD-----LTLTDRTECSAGRDVERDLV 83

Query: 70  ACHVYSFSCFLFSSLVASALKQAIRI--SRGGGEAVAHALG---LRVGMAVSAVGSILGC 129
              V SF+ FLFSSLVA  +K AI +  S+   E     +    LR G+  +A GSILGC
Sbjct: 84  VFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSILGC 143

Query: 130 GFLVVALLNLVQIKLGKFGCGRWETAAAAVPLITLVPSALFIYIALVLHAFTR 178
            FL++++++++Q++LG   CG        + L+ LV SAL +YI  V ++F +
Sbjct: 144 VFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSFRK 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156092.15.4e-8497.13uncharacterized protein LOC111023063 [Momordica charantia][more]
KAA0031767.11.2e-6781.40uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa][more]
XP_008457431.12.7e-6780.81PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncha... [more]
XP_011658339.12.7e-6780.23uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharact... [more]
XP_022970573.13.0e-6680.23uncharacterized protein LOC111469508 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DR422.6e-8497.13uncharacterized protein LOC111023063 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7SQP65.9e-6881.40Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BFZ31.3e-6780.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LV031.3e-6780.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1[more]
A0A1S3C5321.3e-6780.81uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=... [more]
Match NameE-valueIdentityDescription
AT5G05950.12.3e-4053.37maternal effect embryo arrest 60 [more]
AT3G46890.11.5e-3147.87BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA... [more]
AT3G07510.12.2e-2744.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G07510.22.2e-2744.89unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G01580.16.3e-2239.31unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33430MATERNAL EFFECT EMBRYO ARREST PROTEINcoord: 9..177
NoneNo IPR availablePANTHERPTHR33430:SF9BNAC03G75110D PROTEINcoord: 9..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019205.1MS019205.1mRNA