MS018983 (gene) Bitter gourd (TR) v1

Overview
NameMS018983
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold20: 465589 .. 465762 (-)
RNA-Seq ExpressionMS018983
SyntenyMS018983
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGCCGCAACCACCAGCGCCTCCGCCTCATCCCTCAGCCGCCACCACCATAGGCCGCTGAAACTCACCATGGTCGACGCCTTCTCAAACCACCTTTCCTTCCGAGCTTCCCCGTACACGGTGTCATCCACCACCGGCTTCACCACAGTACTCGTCCAATGCACCACCGCCTCG

mRNA sequence

TCCGCCGCAACCACCAGCGCCTCCGCCTCATCCCTCAGCCGCCACCACCATAGGCCGCTGAAACTCACCATGGTCGACGCCTTCTCAAACCACCTTTCCTTCCGAGCTTCCCCGTACACGGTGTCATCCACCACCGGCTTCACCACAGTACTCGTCCAATGCACCACCGCCTCG

Coding sequence (CDS)

TCCGCCGCAACCACCAGCGCCTCCGCCTCATCCCTCAGCCGCCACCACCATAGGCCGCTGAAACTCACCATGGTCGACGCCTTCTCAAACCACCTTTCCTTCCGAGCTTCCCCGTACACGGTGTCATCCACCACCGGCTTCACCACAGTACTCGTCCAATGCACCACCGCCTCG

Protein sequence

SAATTSASASSLSRHHHRPLKLTMVDAFSNHLSFRASPYTVSSTTGFTTVLVQCTTAS
Homology
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BLAST of MS018983 vs. ExPASy TrEMBL
Match: A0A0A0KTG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003710 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 45/58 (77.59%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 1  SAATTSASASSLSRHHHRPLKLTMVDAFSNHLSFRASPYTVSSTTGFTTVLVQCTTAS 59
          SA TTS SASSL+RHHH P KLT V A SNH S R SPY VSSTTGFTT LVQCTTAS
Sbjct: 15 SATTTSTSASSLNRHHHSPPKLTAVAAVSNHFSVRGSPYMVSSTTGFTTALVQCTTAS 72

The following BLAST results are available for this feature:
BLAST of MS018983 vs.
Match NameE-valueIdentityDescription
BLAST of MS018983 vs.
Match NameE-valueIdentityDescription
BLAST of MS018983 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTG51.5e-1277.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003710 PE=4 SV=1[more]
BLAST of MS018983 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018983.1MS018983.1mRNA