Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCAACTCCACAACAGACCTCTGTGGATATGAATGCACTCTCTTCCTTTATCACTGCAATCAACGAAAGAAATCTTGGAATCAGCAGCTTTACCTGGGGAGGGGGAACATCCACACCATCAGATTGCCTACCAATTTGCATCAGAATGCAGAGGCCACCACCAGCCAAGAGCTCTCAGAGCCTTGGGAAGACGATTCTTGGTCTTACCTTTCAGGCAGTTCTAGCCTTGTTCATCAGCTTACCCAGTTCACCTCCGCAACTCCCTACACTTCTTTTTGGAGCTGCCGTGTTGATCAGCTTTGCAGTTTCGTTTGCTGGACTTTTCCTTCAAACTGCATACCCGAGAATGGCGCTTTTGTTTGAAAAGGTCAGTGCTCTTTTTGCTGCAATTGGTGTCTGCATCATAGCTAGTCTTCTTGTCCATCAGAACTTCGCTTGGATCTGTTTGCTGGCATGTGCCTTCACCTTCATAGTCTTTCTTCTATCATTCAAG
mRNA sequence
ATGGCATCAACTCCACAACAGACCTCTGTGGATATGAATGCACTCTCTTCCTTTATCACTGCAATCAACGAAAGAAATCTTGGAATCAGCAGCTTTACCTGGGGAGGGGGAACATCCACACCATCAGATTGCCTACCAATTTGCATCAGAATGCAGAGGCCACCACCAGCCAAGAGCTCTCAGAGCCTTGGGAAGACGATTCTTGGTCTTACCTTTCAGGCAGTTCTAGCCTTGTTCATCAGCTTACCCAGTTCACCTCCGCAACTCCCTACACTTCTTTTTGGAGCTGCCGTGTTGATCAGCTTTGCAGTTTCGTTTGCTGGACTTTTCCTTCAAACTGCATACCCGAGAATGGCGCTTTTGTTTGAAAAGGTCAGTGCTCTTTTTGCTGCAATTGGTGTCTGCATCATAGCTAGTCTTCTTGTCCATCAGAACTTCGCTTGGATCTGTTTGCTGGCATGTGCCTTCACCTTCATAGTCTTTCTTCTATCATTCAAG
Coding sequence (CDS)
ATGGCATCAACTCCACAACAGACCTCTGTGGATATGAATGCACTCTCTTCCTTTATCACTGCAATCAACGAAAGAAATCTTGGAATCAGCAGCTTTACCTGGGGAGGGGGAACATCCACACCATCAGATTGCCTACCAATTTGCATCAGAATGCAGAGGCCACCACCAGCCAAGAGCTCTCAGAGCCTTGGGAAGACGATTCTTGGTCTTACCTTTCAGGCAGTTCTAGCCTTGTTCATCAGCTTACCCAGTTCACCTCCGCAACTCCCTACACTTCTTTTTGGAGCTGCCGTGTTGATCAGCTTTGCAGTTTCGTTTGCTGGACTTTTCCTTCAAACTGCATACCCGAGAATGGCGCTTTTGTTTGAAAAGGTCAGTGCTCTTTTTGCTGCAATTGGTGTCTGCATCATAGCTAGTCTTCTTGTCCATCAGAACTTCGCTTGGATCTGTTTGCTGGCATGTGCCTTCACCTTCATAGTCTTTCTTCTATCATTCAAG
Protein sequence
MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSSQSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMALLFEKVSALFAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK
Homology
BLAST of MS018747 vs. NCBI nr
Match:
XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])
HSP 1 Score: 239.2 bits (609), Expect = 2.6e-59
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS
Sbjct: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
Query: 61 QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120
QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL
Sbjct: 61 QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120
Query: 121 LFEK 125
LFEK
Sbjct: 121 LFEK 124
BLAST of MS018747 vs. NCBI nr
Match:
KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])
HSP 1 Score: 176.8 bits (447), Expect = 1.6e-40
Identity = 109/170 (64.12%), Postives = 124/170 (72.94%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPP--PAK 60
MAST QTS+DM+A SSFI I++RN G+ G TPS+CLP+ IRMQ+ P A
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGL------GCCCTPSNCLPVFIRMQQSPQATAD 60
Query: 61 SSQSLGKTILGLTFQAVLALFISL-PSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
SSQ LGK IL L+FQAVLALFIS P+SPP L F AAV ISFAVSFA LFL ++PR
Sbjct: 61 SSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPR 120
Query: 121 MALLFEKVSALFAAIGVCIIAS-LLVHQNFAWICLLACAFTFIVFLLSFK 167
A LFEKV ALF+A GVC IAS LLVHQNFAWIC +AC F+ IVF LSFK
Sbjct: 121 TAHLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of MS018747 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 103/158 (65.19%), Postives = 119/158 (75.32%), Query Frame = 0
Query: 12 MNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSSQ---SLGKTIL 71
MN L SFITAINERN I+S LPICI MQRP PA SS+ ++GKTIL
Sbjct: 1 MNELYSFITAINERNPEINS-------------LPICITMQRPSPANSSKTENNVGKTIL 60
Query: 72 GLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMALLFEKVSAL 131
GLTFQAVLALFI+ P+S P L T LF AAVLISFAVSFAG+FLQ +PR+ALLFEK+ AL
Sbjct: 61 GLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGAL 120
Query: 132 FAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
AAIGVCI+ASLL+HQNFAWI LA F+ + F+LSF+
Sbjct: 121 IAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of MS018747 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 104/169 (61.54%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
M S+ QQ S+DMN L S IT+INERN I+ LPICI MQ PA SS
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEING-------------LPICIIMQTASPANSS 60
Query: 61 Q---SLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
+ ++G TILGLTFQAVLALFI+ +S P L T LFGAAVLISFAVSF G+FLQ +PR
Sbjct: 61 KTENNVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPR 120
Query: 121 MALLFEKVSALFAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
+ALLFEK+ AL AAIGVCI+ASLL+HQNFAWI LAC F+ + FLLSF+
Sbjct: 121 IALLFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of MS018747 vs. NCBI nr
Match:
KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])
HSP 1 Score: 149.1 bits (375), Expect = 3.5e-32
Identity = 90/168 (53.57%), Postives = 109/168 (64.88%), Query Frame = 0
Query: 1 MAST-PQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKS 60
MA T P + S+DMN L+S I A+ RN GISS TWGG SDCLPI I+MQRP P S
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAA---SDCLPIYIKMQRPSPVNS 60
Query: 61 SQSLGKTILGLTFQAVLALFISL-PSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRM 120
Q G T L LTFQA++ LF+SL PSS LP+ LF A +L SF S+ G+ LQ +P+
Sbjct: 61 PQ-FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKT 120
Query: 121 ALLFEKVSALFAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
A L + ALFAAIG CII SLL++ NF WIC LA F++SFK
Sbjct: 121 AQLLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164
BLAST of MS018747 vs. ExPASy TrEMBL
Match:
A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS
Sbjct: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
Query: 61 QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120
QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL
Sbjct: 61 QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120
Query: 121 LFEK 125
LFEK
Sbjct: 121 LFEK 124
BLAST of MS018747 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 7.5e-41
Identity = 109/170 (64.12%), Postives = 124/170 (72.94%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPP--PAK 60
MAST QTS+DM+A SSFI I++RN G+ G TPS+CLP+ IRMQ+ P A
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGL------GCCCTPSNCLPVFIRMQQSPQATAD 60
Query: 61 SSQSLGKTILGLTFQAVLALFISL-PSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
SSQ LGK IL L+FQAVLALFIS P+SPP L F AAV ISFAVSFA LFL ++PR
Sbjct: 61 SSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPR 120
Query: 121 MALLFEKVSALFAAIGVCIIAS-LLVHQNFAWICLLACAFTFIVFLLSFK 167
A LFEKV ALF+A GVC IAS LLVHQNFAWIC +AC F+ IVF LSFK
Sbjct: 121 TAHLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of MS018747 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.9e-40
Identity = 103/158 (65.19%), Postives = 119/158 (75.32%), Query Frame = 0
Query: 12 MNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSSQ---SLGKTIL 71
MN L SFITAINERN I+S LPICI MQRP PA SS+ ++GKTIL
Sbjct: 1 MNELYSFITAINERNPEINS-------------LPICITMQRPSPANSSKTENNVGKTIL 60
Query: 72 GLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMALLFEKVSAL 131
GLTFQAVLALFI+ P+S P L T LF AAVLISFAVSFAG+FLQ +PR+ALLFEK+ AL
Sbjct: 61 GLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGAL 120
Query: 132 FAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
AAIGVCI+ASLL+HQNFAWI LA F+ + F+LSF+
Sbjct: 121 IAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of MS018747 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 1.9e-39
Identity = 104/169 (61.54%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
M S+ QQ S+DMN L S IT+INERN I+ LPICI MQ PA SS
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEING-------------LPICIIMQTASPANSS 60
Query: 61 Q---SLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
+ ++G TILGLTFQAVLALFI+ +S P L T LFGAAVLISFAVSF G+FLQ +PR
Sbjct: 61 KTENNVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPR 120
Query: 121 MALLFEKVSALFAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
+ALLFEK+ AL AAIGVCI+ASLL+HQNFAWI LAC F+ + FLLSF+
Sbjct: 121 IALLFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of MS018747 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 90/168 (53.57%), Postives = 109/168 (64.88%), Query Frame = 0
Query: 1 MAST-PQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKS 60
MA T P + S+DMN L+S I A+ RN GISS TWGG SDCLPI I+MQRP P S
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAA---SDCLPIYIKMQRPSPVNS 60
Query: 61 SQSLGKTILGLTFQAVLALFISL-PSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRM 120
Q G T L LTFQA++ LF+SL PSS LP+ LF A +L SF S+ G+ LQ +P+
Sbjct: 61 PQ-FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKT 120
Query: 121 ALLFEKVSALFAAIGVCIIASLLVHQNFAWICLLACAFTFIVFLLSFK 167
A L + ALFAAIG CII SLL++ NF WIC LA F++SFK
Sbjct: 121 AQLLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022146444.1 | 2.6e-59 | 100.00 | uncharacterized protein LOC111015658 [Momordica charantia] | [more] |
| KGN49808.1 | 1.6e-40 | 64.12 | hypothetical protein Csa_004650 [Cucumis sativus] | [more] |
| KAA0050246.1 | 1.0e-39 | 65.19 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
| KGN49803.1 | 3.8e-39 | 61.54 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
| KGN49806.1 | 3.5e-32 | 53.57 | hypothetical protein Csa_004683 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CY58 | 1.2e-59 | 100.00 | uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| A0A0A0KJP2 | 7.5e-41 | 64.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
| A0A5A7U7U1 | 4.9e-40 | 65.19 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A0A0KJN8 | 1.9e-39 | 61.54 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
| A0A0A0KQ03 | 1.7e-32 | 53.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
