MS018691 (gene) Bitter gourd (TR) v1

Overview


Name	MS018691
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S27
Location	scaffold313: 1093478 .. 1094043 (-)
RNA-Seq Expression	MS018691
Synteny	MS018691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTTCTTCAAAACGATATTGATTTGCTGAATCCTCCTGCTGAGCTTGAGAAGAGGAAGCACAAGCTCAAGCGTCTGGTGCAATCACCCAACTCGTTCTTCATGGTATGAATTTGCTTCTGTTTTAACTCAATGCCATTTGTTATAAATTTAGTCTATTTATAACTGCTACCTATGACTATTATCCATCAAATTTCAGTTTCTGGCGATTCTTTCTTAGAATCACGCAGATGCTTAGCATTTTATAATTAAGTTTTGCCTTGATTTATATGATATTCTGACATTGTCGTGTTGGTGGTATGAAGGATGTTAAATGCCAGGGATGCTTCAACATGTAAGTGCGATCACCTTCATTAGTATGTTGTATTTTCAAAAATGTATTGTGCCTGAGGATCCCACGTATTTAAAAATCTCCTTTGTTATGTTTGTCAATGAAATGCAGAACCACTGTCTTCAGCCACTCTCAAACTGTCGTGGTATGTGGTAACTGCCAGACCGTCTTATGCCAGCCAACTGGAGGGCGTGCCAGACTCACCGAGGGGTGTTCTTTCAGGAGAAAGGGCGAT

mRNA sequence

AAGGTTCTTCAAAACGATATTGATTTGCTGAATCCTCCTGCTGAGCTTGAGAAGAGGAAGCACAAGCTCAAGCGTCTGGTGCAATCACCCAACTCGTTCTTCATGGATGTTAAATGCCAGGGATGCTTCAACATAACCACTGTCTTCAGCCACTCTCAAACTGTCGTGGTATGTGGTAACTGCCAGACCGTCTTATGCCAGCCAACTGGAGGGCGTGCCAGACTCACCGAGGGGTGTTCTTTCAGGAGAAAGGGCGAT

Coding sequence (CDS)

AAGGTTCTTCAAAACGATATTGATTTGCTGAATCCTCCTGCTGAGCTTGAGAAGAGGAAGCACAAGCTCAAGCGTCTGGTGCAATCACCCAACTCGTTCTTCATGGATGTTAAATGCCAGGGATGCTTCAACATAACCACTGTCTTCAGCCACTCTCAAACTGTCGTGGTATGTGGTAACTGCCAGACCGTCTTATGCCAGCCAACTGGAGGGCGTGCCAGACTCACCGAGGGGTGTTCTTTCAGGAGAAAGGGCGAT

Protein sequence

KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD

Homology

[Close]

BLAST of MS018691 vs. NCBI nr
Match: KAB1201683.1 (40S ribosomal protein S27-2, partial [Morella rubra] >KAB1207694.1 40S ribosomal protein S27-2, partial [Morella rubra])

HSP 1 Score: 180.3 bits (456), Expect = 7.3e-42
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60
          +VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1  QVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 87
          CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. NCBI nr
Match: RYR54172.1 (hypothetical protein Ahy_A06g029426 [Arachis hypogaea])

HSP 1 Score: 180.3 bits (456), Expect = 7.3e-42
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60
          KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 7  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 66

Query: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 87
          CQT+LCQPTGGRARLTEGCSFR+KGD
Sbjct: 67 CQTILCQPTGGRARLTEGCSFRKKGD 92

[Close]

BLAST of MS018691 vs. NCBI nr
Match: XP_031264898.1 (40S ribosomal protein S27-2-like, partial [Pistacia vera])

HSP 1 Score: 179.9 bits (455), Expect = 9.5e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 1  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 60

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61 QTVLCQPTGGRARLTEGCSFRRKGD 85

[Close]

BLAST of MS018691 vs. NCBI nr
Match: XP_022991567.1 (40S ribosomal protein S27-2-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 9.5e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 65  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 124

Query: 62  QTVLCQPTGGRARLTEGCSFRRKGD 87
           QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 125 QTVLCQPTGGRARLTEGCSFRRKGD 149

[Close]

BLAST of MS018691 vs. NCBI nr
Match: XP_022953224.1 (uncharacterized protein LOC111455834 [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 9.5e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 125 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 184

Query: 62  QTVLCQPTGGRARLTEGCSFRRKGD 87
           QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 185 QTVLCQPTGGRARLTEGCSFRRKGD 209

[Close]

BLAST of MS018691 vs. ExPASy Swiss-Prot
Match: Q9M2F1 (40S ribosomal protein S27-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27B PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 8.1e-44
Identity = 82/85 (96.47%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QT+LCQPTGG+A+LTEGCSFRRKGD
Sbjct: 62 QTILCQPTGGKAKLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. ExPASy Swiss-Prot
Match: Q96564 (40S ribosomal protein S27 OS=Hordeum vulgare OX=4513 GN=RPS27 PE=3 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 3.8e-41
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC  C
Sbjct: 2  VLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QTVLCQPTGG+ARLTEGCSFRRKGD
Sbjct: 62 QTVLCQPTGGKARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. ExPASy Swiss-Prot
Match: O64650 (40S ribosomal protein S27-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27A PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.4e-41
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRK 85
          QT+LC PTGG+A+LTEGCSFR+K
Sbjct: 62 QTLLCTPTGGKAKLTEGCSFRKK 84

[Close]

BLAST of MS018691 vs. ExPASy Swiss-Prot
Match: Q8L953 (40S ribosomal protein S27-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27D PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 8.4e-41
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRK 85
          QTVLCQPTGG+ARL EGCSFR+K
Sbjct: 62 QTVLCQPTGGKARLQEGCSFRKK 84

[Close]

BLAST of MS018691 vs. ExPASy Swiss-Prot
Match: P47903 (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS27 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-36
Identity = 72/85 (84.71%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VL +DIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C
Sbjct: 2  VLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
           +VLC PTG   RLTEGCSFRRK D
Sbjct: 62 SSVLCTPTGWPRRLTEGCSFRRKSD 86

[Close]

BLAST of MS018691 vs. ExPASy TrEMBL
Match: A0A6A1UNA9 (40S ribosomal protein S27 OS=Morella rubra OX=262757 GN=CJ030_MR0G000299 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60
          +VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1  QVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 87
          CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. ExPASy TrEMBL
Match: A0A445CTD3 (40S ribosomal protein S27 OS=Arachis hypogaea OX=3818 GN=Ahy_A06g029426 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60
          KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 7  KVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 66

Query: 61 CQTVLCQPTGGRARLTEGCSFRRKGD 87
          CQT+LCQPTGGRARLTEGCSFR+KGD
Sbjct: 67 CQTILCQPTGGRARLTEGCSFRKKGD 92

[Close]

BLAST of MS018691 vs. ExPASy TrEMBL
Match: A0A6J1JTM3 (40S ribosomal protein S27 OS=Cucurbita maxima OX=3661 GN=LOC111489630 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 62 QTVLCQPTGGRARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. ExPASy TrEMBL
Match: B9RG16 (40S ribosomal protein S27 OS=Ricinus communis OX=3988 GN=RCOM_1300070 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 62 QTVLCQPTGGRARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. ExPASy TrEMBL
Match: A0A6J1GM27 (40S ribosomal protein S27 OS=Cucurbita moschata OX=3662 GN=LOC111455199 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 62 QTVLCQPTGGRARLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. TAIR 10
Match: AT3G61110.1 (ribosomal protein S27 )

HSP 1 Score: 177.2 bits (448), Expect = 5.7e-45
Identity = 82/85 (96.47%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          QT+LCQPTGG+A+LTEGCSFRRKGD
Sbjct: 62 QTILCQPTGGKAKLTEGCSFRRKGD 86

[Close]

BLAST of MS018691 vs. TAIR 10
Match: AT2G45710.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 167.5 bits (423), Expect = 4.6e-42
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNC
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRK 85
          QT+LC PTGG+A+LTEGCSFR+K
Sbjct: 62 QTLLCTPTGGKAKLTEGCSFRKK 84

[Close]

BLAST of MS018691 vs. TAIR 10
Match: AT5G47930.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 167.2 bits (422), Expect = 5.9e-42
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2  VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRK 85
          QTVLCQPTGG+ARL EGCSFR+K
Sbjct: 62 QTVLCQPTGGKARLQEGCSFRKK 84

[Close]

BLAST of MS018691 vs. TAIR 10
Match: AT3G61111.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 147.9 bits (372), Expect = 3.7e-36
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 2  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61
          VLQNDIDLLNPPAELEKRKHKLKRLV SPNS+FM V+C  C NITT+FSHSQTVVVCG C
Sbjct: 2  VLQNDIDLLNPPAELEKRKHKLKRLVPSPNSYFMLVRCSDCINITTIFSHSQTVVVCGKC 61

Query: 62 QTVLCQPTGGRARLTEGCSFRRKGD 87
          Q VLCQPTGG+A+LT GCSFR+  D
Sbjct: 62 QNVLCQPTGGKAKLTVGCSFRKLTD 86

The following BLAST results are available for this feature:

BLAST of MS018691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1201683.1	7.3e-42	98.84	40S ribosomal protein S27-2, partial [Morella rubra] >KAB1207694.1 40S ribosomal...	[more]
RYR54172.1	7.3e-42	97.67	hypothetical protein Ahy_A06g029426 [Arachis hypogaea]	[more]
XP_031264898.1	9.5e-42	100.00	40S ribosomal protein S27-2-like, partial [Pistacia vera]	[more]
XP_022991567.1	9.5e-42	100.00	40S ribosomal protein S27-2-like [Cucurbita maxima]	[more]
XP_022953224.1	9.5e-42	100.00	uncharacterized protein LOC111455834 [Cucurbita moschata]	[more]

BLAST of MS018691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2F1	8.1e-44	96.47	40S ribosomal protein S27-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27B PE=2 SV=2	[more]
Q96564	3.8e-41	94.12	40S ribosomal protein S27 OS=Hordeum vulgare OX=4513 GN=RPS27 PE=3 SV=2	[more]
O64650	6.4e-41	92.77	40S ribosomal protein S27-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27A PE=3 SV=1	[more]
Q8L953	8.4e-41	93.98	40S ribosomal protein S27-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27D PE=2 SV=2	[more]
P47903	2.1e-36	84.71	40S ribosomal protein S27 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS27 PE=3 SV=...	[more]

BLAST of MS018691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1UNA9	3.5e-42	98.84	40S ribosomal protein S27 OS=Morella rubra OX=262757 GN=CJ030_MR0G000299 PE=3 SV...	[more]
A0A445CTD3	3.5e-42	97.67	40S ribosomal protein S27 OS=Arachis hypogaea OX=3818 GN=Ahy_A06g029426 PE=3 SV=...	[more]
A0A6J1JTM3	4.6e-42	100.00	40S ribosomal protein S27 OS=Cucurbita maxima OX=3661 GN=LOC111489630 PE=3 SV=1	[more]
B9RG16	4.6e-42	100.00	40S ribosomal protein S27 OS=Ricinus communis OX=3988 GN=RCOM_1300070 PE=3 SV=1	[more]
A0A6J1GM27	4.6e-42	100.00	40S ribosomal protein S27 OS=Cucurbita moschata OX=3662 GN=LOC111455199 PE=3 SV=...	[more]

BLAST of MS018691 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61110.1	5.7e-45	96.47	ribosomal protein S27	[more]
AT2G45710.1	4.6e-42	92.77	Zinc-binding ribosomal protein family protein	[more]
AT5G47930.1	5.9e-42	93.98	Zinc-binding ribosomal protein family protein	[more]
AT3G61111.1	3.7e-36	81.18	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023407	Ribosomal protein S27, zinc-binding domain superfamily	GENE3D	2.20.25.100		coord: 5..85 e-value: 1.3E-49 score: 168.0
IPR000592	Ribosomal protein S27	PFAM	PF01667	Ribosomal_S27e	coord: 30..84 e-value: 2.2E-27 score: 94.5
IPR000592	Ribosomal protein S27	PANTHER	PTHR11594	40S RIBOSOMAL PROTEIN S27	coord: 2..85
IPR000592	Ribosomal protein S27	PROSITE	PS01168	RIBOSOMAL_S27E	coord: 38..70
IPR000592	Ribosomal protein S27	HAMAP	MF_00371	Ribosomal_S27e	coord: 24..84 score: 16.744337
None	No IPR available	PANTHER	PTHR11594:SF7	40S RIBOSOMAL PROTEIN S27-RELATED	coord: 2..85
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 30..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018691.1	MS018691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome