MS018186 (gene) Bitter gourd (TR) v1

Overview
NameMS018186
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold56: 383153 .. 384469 (-)
RNA-Seq ExpressionMS018186
SyntenyMS018186
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGCGATCATTCATGTGCTGGTTTCATGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGATGAAAGTCGTGTGAGAGATTTGGTTTCTTGGAACTCCATGATCAATGGATATGTTAGGTGTGGGCTGGCAAATGAAGCATTGAATCTTTATTATAAGATGGAGGAACTGAAAGTGATTCCAGATGAGGTCACAATGATTGGAGTTGTTTCAGCTTCTGCCCAGCTAGAGGATTTAACTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAGATGGGTTTAAATGTGACCGTTCCACTTACGAATTCATTGATGGATATGTATATTAAGTGTGGGAATATTGAGCCTGCAAAGAAATTGTTTGAGAACATGACAAAGAAAACTATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGGAAGTGCTATGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGAACCGGACGAGATTACTGTCGTTAGTTGTTTGTCTGCATGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTTGAAAAACATAATCTTTCTGTGAACGTTGCCTTAGGGACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAGGGCTCTACAGGTTTTCCGGGAGATGCCAGGAAGAAACTCATTGACTTGGACAGCTATAATTTGTGGTTTAGCACTTCATGGACAATCACATGCTGCCGTAACTTACTTCTCAGAGATGATTGGCATTGGACTGATGCCAGATGAGATCACTTTCCTTGGGGTCTTATCAGCTTGTTGTCACGGTGGACTGGTCGATAAAGGTCGAGAGTATTTTTACCAAATGAGCTCCAAATATGGTGTCTCCCCAAACCTTAAGCATTATTCTTGTATGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAGGCGGAAGAGCTTATTAAGAGCATGCCTTTCAAGGCAGATGCCGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGCATTCATGGAAATGTTCAAATGGGAGAAAGAGCAGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCAAATATGTATGGCGACGCTAATATGTGGGAGCAGGCAAGGAAGGTGAGAAAGATGATGGAAGAAAGAGGGGTGGAGAAAACACCTGGTTGCAGTTCAATTGAA

mRNA sequence

AATGCGATCATTCATGTGCTGGTTTCATGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGATGAAAGTCGTGTGAGAGATTTGGTTTCTTGGAACTCCATGATCAATGGATATGTTAGGTGTGGGCTGGCAAATGAAGCATTGAATCTTTATTATAAGATGGAGGAACTGAAAGTGATTCCAGATGAGGTCACAATGATTGGAGTTGTTTCAGCTTCTGCCCAGCTAGAGGATTTAACTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAGATGGGTTTAAATGTGACCGTTCCACTTACGAATTCATTGATGGATATGTATATTAAGTGTGGGAATATTGAGCCTGCAAAGAAATTGTTTGAGAACATGACAAAGAAAACTATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGGAAGTGCTATGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGAACCGGACGAGATTACTGTCGTTAGTTGTTTGTCTGCATGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTTGAAAAACATAATCTTTCTGTGAACGTTGCCTTAGGGACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAGGGCTCTACAGGTTTTCCGGGAGATGCCAGGAAGAAACTCATTGACTTGGACAGCTATAATTTGTGGTTTAGCACTTCATGGACAATCACATGCTGCCGTAACTTACTTCTCAGAGATGATTGGCATTGGACTGATGCCAGATGAGATCACTTTCCTTGGGGTCTTATCAGCTTGTTGTCACGGTGGACTGGTCGATAAAGGTCGAGAGTATTTTTACCAAATGAGCTCCAAATATGGTGTCTCCCCAAACCTTAAGCATTATTCTTGTATGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAGGCGGAAGAGCTTATTAAGAGCATGCCTTTCAAGGCAGATGCCGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGCATTCATGGAAATGTTCAAATGGGAGAAAGAGCAGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCAAATATGTATGGCGACGCTAATATGTGGGAGCAGGCAAGGAAGGTGAGAAAGATGATGGAAGAAAGAGGGGTGGAGAAAACACCTGGTTGCAGTTCAATTGAA

Coding sequence (CDS)

AATGCGATCATTCATGTGCTGGTTTCATGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGATGAAAGTCGTGTGAGAGATTTGGTTTCTTGGAACTCCATGATCAATGGATATGTTAGGTGTGGGCTGGCAAATGAAGCATTGAATCTTTATTATAAGATGGAGGAACTGAAAGTGATTCCAGATGAGGTCACAATGATTGGAGTTGTTTCAGCTTCTGCCCAGCTAGAGGATTTAACTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAGATGGGTTTAAATGTGACCGTTCCACTTACGAATTCATTGATGGATATGTATATTAAGTGTGGGAATATTGAGCCTGCAAAGAAATTGTTTGAGAACATGACAAAGAAAACTATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGGAAGTGCTATGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGAACCGGACGAGATTACTGTCGTTAGTTGTTTGTCTGCATGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTTGAAAAACATAATCTTTCTGTGAACGTTGCCTTAGGGACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAGGGCTCTACAGGTTTTCCGGGAGATGCCAGGAAGAAACTCATTGACTTGGACAGCTATAATTTGTGGTTTAGCACTTCATGGACAATCACATGCTGCCGTAACTTACTTCTCAGAGATGATTGGCATTGGACTGATGCCAGATGAGATCACTTTCCTTGGGGTCTTATCAGCTTGTTGTCACGGTGGACTGGTCGATAAAGGTCGAGAGTATTTTTACCAAATGAGCTCCAAATATGGTGTCTCCCCAAACCTTAAGCATTATTCTTGTATGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAGGCGGAAGAGCTTATTAAGAGCATGCCTTTCAAGGCAGATGCCGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGCATTCATGGAAATGTTCAAATGGGAGAAAGAGCAGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCAAATATGTATGGCGACGCTAATATGTGGGAGCAGGCAAGGAAGGTGAGAAAGATGATGGAAGAAAGAGGGGTGGAGAAAACACCTGGTTGCAGTTCAATTGAA

Protein sequence

NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVIPDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKLFENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMYAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFLGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPFKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE
Homology
BLAST of MS018186 vs. NCBI nr
Match: XP_022154126.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154127.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154128.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154129.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia])

HSP 1 Score: 889.0 bits (2296), Expect = 1.6e-254
Identity = 435/439 (99.09%), Postives = 437/439 (99.54%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKV+
Sbjct: 195 NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVM 254

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLN+TVPLTNSLMDMYIKCGNIEPAK L
Sbjct: 255 PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNLTVPLTNSLMDMYIKCGNIEPAKTL 314

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 315 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 374

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY
Sbjct: 375 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 434

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIKRALQVFREMPGRNSLTWTA ICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL
Sbjct: 435 AKCGNIKRALQVFREMPGRNSLTWTATICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 494

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF
Sbjct: 495 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 554

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 555 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 614

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 615 RKMMEERGVEKTPGCSSIE 633

BLAST of MS018186 vs. NCBI nr
Match: XP_038878576.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida] >XP_038878577.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida] >XP_038878578.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida])

HSP 1 Score: 820.1 bits (2117), Expect = 9.3e-234
Identity = 394/439 (89.75%), Postives = 423/439 (96.36%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVS GELLAARKVFD+S VRDLVSWNS+INGYVRCGLA+EAL+LYYKM ELKV 
Sbjct: 194 NAIIHVLVSSGELLAARKVFDKSCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELKVK 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE+L LGRKLHQFIEEMGLN+TVPL N+LMDMYIKC +IE AK L
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKDIEAAKIL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAKFGL  SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMTKKTIVSWTTMVVGYAKFGLFESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQ+SNV+PDE+TVV+CLSACSQLGALDVGIWMHHYV+KHNL++NVALGTALVDMY
Sbjct: 374 ALFHEMQSSNVDPDEVTVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+A+QVF EMPGRNSLTWTAIICGLALHGQ+H A++YFSEMI IGL+PDEITF+
Sbjct: 434 AKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHTAISYFSEMISIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSKYG+SP LKHYSC+VDLLGRAGFLEEAEELIKSMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIKSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADAVVWGALFFGSRIHGNV MGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK+
Sbjct: 554 EADAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKI 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. NCBI nr
Match: XP_023531862.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 818.9 bits (2114), Expect = 2.1e-233
Identity = 391/439 (89.07%), Postives = 424/439 (96.58%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNS+INGYVRCGLA+EALNLYYKMEELKV 
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALNLYYKMEELKVK 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIG+VSASAQLE++ LGRKLHQFIEEMGLN+T+PL N+LMDMYIKC NIE A+ L
Sbjct: 254 PDEVTMIGLVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDMYIKCKNIEAAETL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAK G+L SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMTKKTIVSWTTMVVGYAKCGMLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV+PDE+TVVSCLSACSQLGALDVGIWMHH+V+K NL++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHHFVDKQNLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+ALQVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEM+ IGL+PDEITF+
Sbjct: 434 AKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMVSIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSKYG+SP LKHYSCMVDLLGRAGFLEEAEE+I+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGFLEEAEEIIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADAVVWGALFFGSR+HGNV +GERAA KLLELDPHDSGIYVLLANMYGDANMWE+ARKV
Sbjct: 554 EADAVVWGALFFGSRMHGNVHIGERAAFKLLELDPHDSGIYVLLANMYGDANMWEKARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. NCBI nr
Match: KAA0059090.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18838.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 816.2 bits (2107), Expect = 1.3e-232
Identity = 392/439 (89.29%), Postives = 421/439 (95.90%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNS+INGYVRCGLA+EAL+LYYKM EL V+
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVM 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE+L LGRKLHQFIEEMGLN+TVPL N+LMDMYIKC NIE AK L
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENM KKT+VSWT MVVGYAKFGLL SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV PD +TVV+CLSACSQLGALDVGIWMHHYV+KH+L++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+A+QVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEMI IGL+PDEITF+
Sbjct: 434 AKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSK+G+SP LKHYSC+VDLLGRAGFLEEAEELI+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           + DAVVWGALFFGSRIHGNV MGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 554 EPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. NCBI nr
Match: XP_008450440.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis melo])

HSP 1 Score: 814.7 bits (2103), Expect = 3.9e-232
Identity = 391/439 (89.07%), Postives = 420/439 (95.67%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNS+INGYVRCGLA+EAL+LYYKM EL V+
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVM 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE+L LGRKLHQFIEEMGLN+TVPL N+LMDMYIKC NIE AK L
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENM KKT+VSWT MVVGYAKFGLL SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV PD +T V+CLSACSQLGALDVGIWMHHYV+KH+L++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVAPDGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+A+QVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEMI IGL+PDEITF+
Sbjct: 434 AKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSK+G+SP LKHYSC+VDLLGRAGFLEEAEELI+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           + DAVVWGALFFGSRIHGNV MGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 554 EPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 8.6e-174
Identity = 283/439 (64.46%), Postives = 359/439 (81.78%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NA IH+  SCG++  ARKVFDES VRDLVSWN +INGY + G A +A+ +Y  ME   V 
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PD+VTMIG+VS+ + L DL  G++ +++++E GL +T+PL N+LMDM+ KCG+I  A+++
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+N+ K+TIVSWTTM+ GYA+ GLL  + +LF++M EKDVV WNA+IGG VQAKR ++AL
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALF EMQ SN +PDEIT++ CLSACSQLGALDVGIW+H Y+EK++LS+NVALGT+LVDMY
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNI  AL VF  +  RNSLT+TAII GLALHG +  A++YF+EMI  G+ PDEITF+
Sbjct: 435 AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 494

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           G+LSACCHGG++  GR+YF QM S++ ++P LKHYS MVDLLGRAG LEEA+ L++SMP 
Sbjct: 495 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADA VWGAL FG R+HGNV++GE+AA KLLELDP DSGIYVLL  MYG+ANMWE A++ 
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA 614

Query: 421 RKMMEERGVEKTPGCSSIE 440
           R+MM ERGVEK PGCSSIE
Sbjct: 615 RRMMNERGVEKIPGCSSIE 633

BLAST of MS018186 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 7.9e-119
Identity = 201/440 (45.68%), Postives = 300/440 (68.18%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           N++IH   SCG+L +A KVF   + +D+VSWNSMING+V+ G  ++AL L+ KME   V 
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
              VTM+GV+SA A++ +L  GR++  +IEE  +NV + L N+++DMY KCG+IE AK+L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+ M +K  V+WTTM+ GYA      +A  + N MP+KD+V WNALI  + Q  +  EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349

Query: 181 ALFHEMQ-ASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDM 240
            +FHE+Q   N++ ++IT+VS LSAC+Q+GAL++G W+H Y++KH + +N  + +AL+ M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409

Query: 241 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 300
           Y+KCG+++++ +VF  +  R+   W+A+I GLA+HG  + AV  F +M    + P+ +TF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469

Query: 301 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 360
             V  AC H GLVD+    F+QM S YG+ P  KHY+C+VD+LGR+G+LE+A + I++MP
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529

Query: 361 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 420
                 VWGAL    +IH N+ + E A ++LLEL+P + G +VLL+N+Y     WE   +
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589

Query: 421 VRKMMEERGVEKTPGCSSIE 440
           +RK M   G++K PGCSSIE
Sbjct: 590 LRKHMRVTGLKKEPGCSSIE 609

BLAST of MS018186 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 391.0 bits (1003), Expect = 1.8e-107
Identity = 178/439 (40.55%), Postives = 288/439 (65.60%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NA++ +   CG +  AR VFD     D+ SWN MI+GY R     E++ L  +ME   V 
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           P  VT++ V+SA ++++D  L +++H+++ E     ++ L N+L++ Y  CG ++ A ++
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F +M  + ++SWT++V GY + G L  A   F++MP +D + W  +I G+++A    E+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
            +F EMQ++ + PDE T+VS L+AC+ LG+L++G W+  Y++K+ +  +V +G AL+DMY
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
            KCG  ++A +VF +M  R+  TWTA++ GLA +GQ   A+  F +M  + + PD+IT+L
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSAC H G+VD+ R++F +M S + + P+L HY CMVD+LGRAG ++EA E+++ MP 
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
             +++VWGAL   SR+H +  M E AA K+LEL+P +  +Y LL N+Y     W+  R+V
Sbjct: 534 NPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREV 593

Query: 421 RKMMEERGVEKTPGCSSIE 440
           R+ + +  ++KTPG S IE
Sbjct: 594 RRKIVDVAIKKTPGFSLIE 612

BLAST of MS018186 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.4e-106
Identity = 180/440 (40.91%), Postives = 277/440 (62.95%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           +A++ + + C  +  A+++FDE    +L   N+M + YVR GL  EAL ++  M +  V 
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PD ++M+  +S+ +QL ++  G+  H ++   G      + N+L+DMY+KC   + A ++
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+ M+ KT+V+W ++V GY + G + +A   F  MPEK++V WN +I G VQ    +EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454

Query: 181 ALFHEMQA-SNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDM 240
            +F  MQ+   V  D +T++S  SAC  LGALD+  W+++Y+EK+ + ++V LGT LVDM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514

Query: 241 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 300
           +++CG+ + A+ +F  +  R+   WTA I  +A+ G +  A+  F +MI  GL PD + F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574

Query: 301 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 360
           +G L+AC HGGLV +G+E FY M   +GVSP   HY CMVDLLGRAG LEEA +LI+ MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634

Query: 361 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 420
            + + V+W +L    R+ GNV+M   AA K+  L P  +G YVLL+N+Y  A  W    K
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694

Query: 421 VRKMMEERGVEKTPGCSSIE 440
           VR  M+E+G+ K PG SSI+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQ 714

BLAST of MS018186 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.8e-105
Identity = 187/440 (42.50%), Postives = 272/440 (61.82%), Query Frame = 0

Query: 2   AIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVIP 61
           A+I    S G +  A+K+FDE  V+D+VSWN+MI+GY   G   EAL L+  M +  V P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264

Query: 62  DEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKLF 121
           DE TM+ VVSA AQ   + LGR++H +I++ G    + + N+L+D+Y KCG +E A  LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324

Query: 122 ENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEALA 181
           E                                +P KDV+ WN LIGG+      KEAL 
Sbjct: 325 E-------------------------------RLPYKDVISWNTLIGGYTHMNLYKEALL 384

Query: 182 LFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVA--LGTALVDM 241
           LF EM  S   P+++T++S L AC+ LGA+D+G W+H Y++K    V  A  L T+L+DM
Sbjct: 385 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 444

Query: 242 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 301
           YAKCG+I+ A QVF  +  ++  +W A+I G A+HG++ A+   FS M  IG+ PD+ITF
Sbjct: 445 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 504

Query: 302 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 361
           +G+LSAC H G++D GR  F  M+  Y ++P L+HY CM+DLLG +G  +EAEE+I  M 
Sbjct: 505 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 564

Query: 362 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 421
            + D V+W +L    ++HGNV++GE  A  L++++P + G YVLL+N+Y  A  W +  K
Sbjct: 565 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 613

Query: 422 VRKMMEERGVEKTPGCSSIE 440
            R ++ ++G++K PGCSSIE
Sbjct: 625 TRALLNDKGMKKVPGCSSIE 613

BLAST of MS018186 vs. ExPASy TrEMBL
Match: A0A6J1DMT0 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021456 PE=4 SV=1)

HSP 1 Score: 889.0 bits (2296), Expect = 7.9e-255
Identity = 435/439 (99.09%), Postives = 437/439 (99.54%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKV+
Sbjct: 195 NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVM 254

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLN+TVPLTNSLMDMYIKCGNIEPAK L
Sbjct: 255 PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNLTVPLTNSLMDMYIKCGNIEPAKTL 314

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 315 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 374

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY
Sbjct: 375 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 434

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIKRALQVFREMPGRNSLTWTA ICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL
Sbjct: 435 AKCGNIKRALQVFREMPGRNSLTWTATICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 494

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF
Sbjct: 495 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 554

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 555 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 614

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 615 RKMMEERGVEKTPGCSSIE 633

BLAST of MS018186 vs. ExPASy TrEMBL
Match: A0A5A7UVG6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00300 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 6.5e-233
Identity = 392/439 (89.29%), Postives = 421/439 (95.90%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNS+INGYVRCGLA+EAL+LYYKM EL V+
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVM 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE+L LGRKLHQFIEEMGLN+TVPL N+LMDMYIKC NIE AK L
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENM KKT+VSWT MVVGYAKFGLL SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV PD +TVV+CLSACSQLGALDVGIWMHHYV+KH+L++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+A+QVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEMI IGL+PDEITF+
Sbjct: 434 AKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSK+G+SP LKHYSC+VDLLGRAGFLEEAEELI+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           + DAVVWGALFFGSRIHGNV MGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 554 EPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. ExPASy TrEMBL
Match: A0A1S3BP74 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492040 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 1.9e-232
Identity = 391/439 (89.07%), Postives = 420/439 (95.67%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNS+INGYVRCGLA+EAL+LYYKM EL V+
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVM 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE+L LGRKLHQFIEEMGLN+TVPL N+LMDMYIKC NIE AK L
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENM KKT+VSWT MVVGYAKFGLL SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV PD +T V+CLSACSQLGALDVGIWMHHYV+KH+L++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVAPDGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+A+QVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEMI IGL+PDEITF+
Sbjct: 434 AKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSK+G+SP LKHYSC+VDLLGRAGFLEEAEELI+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           + DAVVWGALFFGSRIHGNV MGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV
Sbjct: 554 EPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. ExPASy TrEMBL
Match: A0A6J1HQQ6 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466501 PE=4 SV=1)

HSP 1 Score: 813.5 bits (2100), Expect = 4.2e-232
Identity = 389/439 (88.61%), Postives = 421/439 (95.90%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNSMINGYVRCGLA+EALNLYYKME+LKV 
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYKMEDLKVK 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIG+VSASAQLE++ LGRKLHQF EEMGLN+T+PL N+LMDMYIKC NIE AK L
Sbjct: 254 PDEVTMIGLVSASAQLENVALGRKLHQFTEEMGLNLTIPLVNALMDMYIKCKNIEAAKTL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAK G+L SA+ LFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMTKKTIVSWTTMVVGYAKCGMLESAVMLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALFHEMQASNV+PDE+TVVSCLSACSQLGALDVGIWMH +V+K NL++NVALGTALVDMY
Sbjct: 374 ALFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+ALQVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEM+ IGL+PDEITF+
Sbjct: 434 AKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMVSIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGLVD+GR+YFYQMSSKYG+SP LKHYSCMVDLLGRAGFLEEAEE+I+SMPF
Sbjct: 494 GVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGFLEEAEEIIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADAVVWGALFFGSR+HGNV +GERAA KLLELDPHDSGIYVLLANMYGDANMWE+ARKV
Sbjct: 554 EADAVVWGALFFGSRMHGNVHIGERAAFKLLELDPHDSGIYVLLANMYGDANMWEKARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMMEERGVEKTPGCSSIE
Sbjct: 614 RKMMEERGVEKTPGCSSIE 632

BLAST of MS018186 vs. ExPASy TrEMBL
Match: A0A6J1ELP9 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111434490 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 2.1e-231
Identity = 387/439 (88.15%), Postives = 421/439 (95.90%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NAIIHVLVSCGELLAARKVFDES VRDLVSWNSMINGYVRCGLA+EALNLYYKME+LKV 
Sbjct: 194 NAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYKMEDLKVK 253

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PDEVTMIGVVSASAQLE++ LGRKLHQFIEEMGLN+T+PL N+LMDMYIKC NIE A+ L
Sbjct: 254 PDEVTMIGVVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDMYIKCKNIEAAETL 313

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           FENMTKKTIVSWTTMVVGYAK G+L SA+RLFNEMPEKDVVPWNALIGGFVQAKRSKEAL
Sbjct: 314 FENMTKKTIVSWTTMVVGYAKCGMLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 373

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
            LFHEMQASNV+PDE+TVVSCLSACSQLGALDVGIWMH +V+K NL++NVALGTALVDMY
Sbjct: 374 TLFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTALVDMY 433

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNIK+ALQVF EMPGRNSLTWTAIICGLALHGQ+HAA++YFSEM+ IGL+PDEITF+
Sbjct: 434 AKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMVSIGLVPDEITFI 493

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSACCHGGL D+GR+YFYQMSSKYG+SP LKHYSCMVDLLGRAGFLEEAEE+I+SMPF
Sbjct: 494 GVLSACCHGGLADQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGFLEEAEEIIRSMPF 553

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADAVVWGALFFGSR+HG+V +GERAA KLLELDPHDSGIYVLLANMYGDANMWE+ARKV
Sbjct: 554 EADAVVWGALFFGSRMHGSVHIGERAAFKLLELDPHDSGIYVLLANMYGDANMWEKARKV 613

Query: 421 RKMMEERGVEKTPGCSSIE 440
           RKMME+RGVEKTPGCSSIE
Sbjct: 614 RKMMEQRGVEKTPGCSSIE 632

BLAST of MS018186 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 611.3 bits (1575), Expect = 6.1e-175
Identity = 283/439 (64.46%), Postives = 359/439 (81.78%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NA IH+  SCG++  ARKVFDES VRDLVSWN +INGY + G A +A+ +Y  ME   V 
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PD+VTMIG+VS+ + L DL  G++ +++++E GL +T+PL N+LMDM+ KCG+I  A+++
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+N+ K+TIVSWTTM+ GYA+ GLL  + +LF++M EKDVV WNA+IGG VQAKR ++AL
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
           ALF EMQ SN +PDEIT++ CLSACSQLGALDVGIW+H Y+EK++LS+NVALGT+LVDMY
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
           AKCGNI  AL VF  +  RNSLT+TAII GLALHG +  A++YF+EMI  G+ PDEITF+
Sbjct: 435 AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 494

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           G+LSACCHGG++  GR+YF QM S++ ++P LKHYS MVDLLGRAG LEEA+ L++SMP 
Sbjct: 495 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
           +ADA VWGAL FG R+HGNV++GE+AA KLLELDP DSGIYVLL  MYG+ANMWE A++ 
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA 614

Query: 421 RKMMEERGVEKTPGCSSIE 440
           R+MM ERGVEK PGCSSIE
Sbjct: 615 RRMMNERGVEKIPGCSSIE 633

BLAST of MS018186 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 428.7 bits (1101), Expect = 5.6e-120
Identity = 201/440 (45.68%), Postives = 300/440 (68.18%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           N++IH   SCG+L +A KVF   + +D+VSWNSMING+V+ G  ++AL L+ KME   V 
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
              VTM+GV+SA A++ +L  GR++  +IEE  +NV + L N+++DMY KCG+IE AK+L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+ M +K  V+WTTM+ GYA      +A  + N MP+KD+V WNALI  + Q  +  EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349

Query: 181 ALFHEMQ-ASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDM 240
            +FHE+Q   N++ ++IT+VS LSAC+Q+GAL++G W+H Y++KH + +N  + +AL+ M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409

Query: 241 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 300
           Y+KCG+++++ +VF  +  R+   W+A+I GLA+HG  + AV  F +M    + P+ +TF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469

Query: 301 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 360
             V  AC H GLVD+    F+QM S YG+ P  KHY+C+VD+LGR+G+LE+A + I++MP
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529

Query: 361 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 420
                 VWGAL    +IH N+ + E A ++LLEL+P + G +VLL+N+Y     WE   +
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589

Query: 421 VRKMMEERGVEKTPGCSSIE 440
           +RK M   G++K PGCSSIE
Sbjct: 590 LRKHMRVTGLKKEPGCSSIE 609

BLAST of MS018186 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 391.0 bits (1003), Expect = 1.3e-108
Identity = 178/439 (40.55%), Postives = 288/439 (65.60%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           NA++ +   CG +  AR VFD     D+ SWN MI+GY R     E++ L  +ME   V 
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           P  VT++ V+SA ++++D  L +++H+++ E     ++ L N+L++ Y  CG ++ A ++
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F +M  + ++SWT++V GY + G L  A   F++MP +D + W  +I G+++A    E+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353

Query: 181 ALFHEMQASNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDMY 240
            +F EMQ++ + PDE T+VS L+AC+ LG+L++G W+  Y++K+ +  +V +G AL+DMY
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413

Query: 241 AKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITFL 300
            KCG  ++A +VF +M  R+  TWTA++ GLA +GQ   A+  F +M  + + PD+IT+L
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473

Query: 301 GVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMPF 360
           GVLSAC H G+VD+ R++F +M S + + P+L HY CMVD+LGRAG ++EA E+++ MP 
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533

Query: 361 KADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKV 420
             +++VWGAL   SR+H +  M E AA K+LEL+P +  +Y LL N+Y     W+  R+V
Sbjct: 534 NPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREV 593

Query: 421 RKMMEERGVEKTPGCSSIE 440
           R+ + +  ++KTPG S IE
Sbjct: 594 RRKIVDVAIKKTPGFSLIE 612

BLAST of MS018186 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 386.7 bits (992), Expect = 2.4e-107
Identity = 180/440 (40.91%), Postives = 277/440 (62.95%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           +A++ + + C  +  A+++FDE    +L   N+M + YVR GL  EAL ++  M +  V 
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PD ++M+  +S+ +QL ++  G+  H ++   G      + N+L+DMY+KC   + A ++
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+ M+ KT+V+W ++V GY + G + +A   F  MPEK++V WN +I G VQ    +EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454

Query: 181 ALFHEMQA-SNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDM 240
            +F  MQ+   V  D +T++S  SAC  LGALD+  W+++Y+EK+ + ++V LGT LVDM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514

Query: 241 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 300
           +++CG+ + A+ +F  +  R+   WTA I  +A+ G +  A+  F +MI  GL PD + F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574

Query: 301 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 360
           +G L+AC HGGLV +G+E FY M   +GVSP   HY CMVDLLGRAG LEEA +LI+ MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634

Query: 361 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 420
            + + V+W +L    R+ GNV+M   AA K+  L P  +G YVLL+N+Y  A  W    K
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694

Query: 421 VRKMMEERGVEKTPGCSSIE 440
           VR  M+E+G+ K PG SSI+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQ 714

BLAST of MS018186 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 386.7 bits (992), Expect = 2.4e-107
Identity = 180/440 (40.91%), Postives = 277/440 (62.95%), Query Frame = 0

Query: 1   NAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYKMEELKVI 60
           +A++ + + C  +  A+++FDE    +L   N+M + YVR GL  EAL ++  M +  V 
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334

Query: 61  PDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNVTVPLTNSLMDMYIKCGNIEPAKKL 120
           PD ++M+  +S+ +QL ++  G+  H ++   G      + N+L+DMY+KC   + A ++
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394

Query: 121 FENMTKKTIVSWTTMVVGYAKFGLLGSAMRLFNEMPEKDVVPWNALIGGFVQAKRSKEAL 180
           F+ M+ KT+V+W ++V GY + G + +A   F  MPEK++V WN +I G VQ    +EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454

Query: 181 ALFHEMQA-SNVEPDEITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALGTALVDM 240
            +F  MQ+   V  D +T++S  SAC  LGALD+  W+++Y+EK+ + ++V LGT LVDM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514

Query: 241 YAKCGNIKRALQVFREMPGRNSLTWTAIICGLALHGQSHAAVTYFSEMIGIGLMPDEITF 300
           +++CG+ + A+ +F  +  R+   WTA I  +A+ G +  A+  F +MI  GL PD + F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574

Query: 301 LGVLSACCHGGLVDKGREYFYQMSSKYGVSPNLKHYSCMVDLLGRAGFLEEAEELIKSMP 360
           +G L+AC HGGLV +G+E FY M   +GVSP   HY CMVDLLGRAG LEEA +LI+ MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634

Query: 361 FKADAVVWGALFFGSRIHGNVQMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARK 420
            + + V+W +L    R+ GNV+M   AA K+  L P  +G YVLL+N+Y  A  W    K
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694

Query: 421 VRKMMEERGVEKTPGCSSIE 440
           VR  M+E+G+ K PG SSI+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQ 714

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154126.11.6e-25499.09pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica ... [more]
XP_038878576.19.3e-23489.75pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa ... [more]
XP_023531862.12.1e-23389.07pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita ... [more]
KAA0059090.11.3e-23289.29pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18838... [more]
XP_008450440.13.9e-23289.07PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial ... [more]
Match NameE-valueIdentityDescription
Q9SJZ38.6e-17464.46Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
O823807.9e-11945.68Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LSB81.8e-10740.55Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
Q9LUJ23.4e-10640.91Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Q9LN013.8e-10542.50Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1DMT07.9e-25599.09pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Momordic... [more]
A0A5A7UVG66.5e-23389.29Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BP741.9e-23289.07pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis ... [more]
A0A6J1HQQ64.2e-23288.61pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbit... [more]
A0A6J1ELP92.1e-23188.15pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT2G22410.16.1e-17564.46SLOW GROWTH 1 [more]
AT2G29760.15.6e-12045.68Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G15930.11.3e-10840.55Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22690.12.4e-10740.91CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.22.4e-10740.91INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..396
e-value: 3.6E-25
score: 91.0
coord: 1..96
e-value: 5.3E-17
score: 64.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 125..215
e-value: 3.5E-24
score: 87.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 216..283
e-value: 5.7E-7
score: 31.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 239..420
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 102..127
e-value: 0.0018
score: 18.4
coord: 401..429
e-value: 0.1
score: 12.9
coord: 334..358
e-value: 4.2E-4
score: 20.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 27..66
e-value: 6.6E-9
score: 35.9
coord: 158..205
e-value: 3.7E-12
score: 46.2
coord: 260..308
e-value: 1.1E-7
score: 32.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 234..257
e-value: 7.5E-4
score: 17.5
coord: 263..289
e-value: 8.8E-4
score: 17.3
coord: 130..162
e-value: 6.6E-6
score: 24.0
coord: 163..195
e-value: 1.6E-8
score: 32.2
coord: 298..331
e-value: 1.7E-5
score: 22.7
coord: 335..358
e-value: 0.0016
score: 16.5
coord: 29..63
e-value: 5.5E-8
score: 30.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 27..61
score: 12.452094
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..431
score: 9.065053
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..330
score: 8.681407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 229..259
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..158
score: 9.470621
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 9.558311
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..193
score: 12.167101
NoneNo IPR availablePANTHERPTHR47928:SF30OS10G0400250 PROTEINcoord: 134..439
NoneNo IPR availablePANTHERPTHR47928:SF30OS10G0400250 PROTEINcoord: 46..136
coord: 1..94
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 46..136
coord: 1..94
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 134..439

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018186.1MS018186.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding