MS017825 (gene) Bitter gourd (TR) v1

Overview


Name	MS017825
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein BOLA4, chloroplastic/mitochondrial
Location	scaffold373: 2942665 .. 2950710 (-)
RNA-Seq Expression	MS017825
Synteny	MS017825

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGATGGTTAGGGTTCCGCAAGTTGCGTTCCGTCGGGTTCTTCCACTGTTCGTTCACCGCGACGTACCCTTTTTGGTTGTCTCCCGGCAAATCACGACCAATTGCGTCCGCACCGCCGCCGCCGCTATTTCCTCCAGAACCACCACCAGTGTCCGTTGTAAGAGCAGTAATGTTGCAAAATATGGCTCTGCTAACGGAACGTTCTCGAAATGGGGTTCGAGTCGGAACTTGAGTATTAGAGCTACTCAAGTGAATGACTCCGGGTCTATCGATTCCCCACTCATGCAGTCAATGGAGAACAAGGTATTTTTATTTAATTTTTGGTTCTTTTTTTCATCGTGTTAGGTTTTATCTTTTTCTATGCTTACCTTTGTTTTAGAAAGCCAAACAATGCAATGTTCTGGATGTTCTTTGAGGGAAGTGTAGGGCAAGTCACGGAGCTAATTGGAGAGGAGTGAAATCTCCAGTTTAGCTTAGGAAATGTTCTTCTTGGGATACTGATGAAGAGCTTAACGCCGAATTTATGCGAAGATTTTCATATTTTCATTAGATAAGGAACAACAATGAAGTAATTTAGGTGACAGCATCGTGGGTGAATGTATTGTTTAAATGCTCAAAACTAATATTTGTGGAGTTCTGTAGTCTGTTTATTTTTTCGGGTGTTACTTGTTTCCCCCTTCTCCAGCACACTTCTATTTTTTTTCCCCTTAAAAACCCTTCTCCAGCATTTTTAATACCTTCTTGCACTATTTTTATGTTTCCAAATATGAGTCTGTTCTCTTGACAAAAACAGTGAAGGAGCTAAAATATTAAAATTCCAGCGTGGGGTGTTGTTGATGTGTTACTGATGCAACAGAAGAGATAGCTACAAAATTGTTAAATTATATAAATATACAAGCAATTCATAAATCATAGTTAGATAATAAAAGTTGTGCAATCCAAGTCTTACAATTCTTGAAATTATTCTAGTAAAACCTATTTGAATAGAAATTGTTATTTCTTTCTAGAGTTCCTCGGAGTTATGGCTATTCTTTTCCTTTTACATTTTCTTCATCTCTTTCTTTCAAGACTATTAAATTTTTGTTCACTGAGTTGACGTTGAAAATTTCTTTATCAGATTAAGGAACAACTAGATGCACAATCTGTCACTGTAAAAGATGCTTATGGGGATGGACGACATGTTAGGTGAGGACTTTTACCTATAATTGCTTTTAGACGCTTGATTTATCCCAAATGTATGTTTGAGAAAATATTTTATTTTATTTTATTTTTTTTTTTAAAGAAAACATTTTATTTTCTCCCATTTGTTCCTTATCCACATTTGGGCTTCTTATCAAATTTGTTTGCCTTCAATCACGGTGTTAAAAGTCCAATAATTTTATGAATATGGAAGTATTTTAGGTGCAATCTAAGGTGGAAAGTTTCTCCCTTGTCTGAAGATAAAAGGAATATTTGTAGGCATAGCTTGAGTGAATTGAGATGCTCATGTTGAAAATATAAAACACAAAAAGCAGAAAATATAAAACACAAAAGCTCATGTTGAAAATATAAAATTCATTAAAACATTATTGAAATTGTGGTTGACAAGATTGTATCTACTCTAGTGACTACATAATGATAAGGAATATGAAAAGGACTACATAATGATAAGGGAAAACATATATTTTTTTTTATCAAGACAAAATATATTATTTATATGACAATTACTTTGAGAATGAACGAGCAACATGAAGTAAATCAGAAAAGTAGTTTTTGGTCTCAATAGGAATAAATCTCCTGGGCATTTTTCAATGGCGTTCTTTCAAGACATCTGGAGTGCATTGAGGAGGACCCATGGATTATGAAAGGTCTTGAGGGAGTTCCATGAGAAGAGGGGTCATTGATGCTTCTATAAATTAAACATTTGTTTGTCTTATCTCCAAGAAGGAGAATGCAAACAAGGTGAAAGATTTTAGGCCCATAAGTATGGCGACGAGCCTTTATAAGATTAATGCTAAGACTTTAGCATATTAGATTAAGGGTAGTCCTCCATAGTATTGTTTCAAGCATCCAAGGAGCCTTCGTGGTAAGTAGTCAACTTCTGGATTAGGCTAATGGGTGATTGAGGATTATAGGAAAAAGAATTAGGAAGGGGTGCTTTTAAGACCGATTTCAAGAAGCCTAAGATCATGTTTGGATAAGGTCCCTTGGAAGAAAGAGTTTGGGTTTAAGTGGGGATCTTGGATTTGGAGACGTATAAAGTCTGTTAACTTCTCCATCCTTGTTAATGGTAACCTCAGAGGTAAGTTTTTTGCTTCTAGAGGTCTTAGGCAAGGTGATTCCTTTTTGCTTTTATGTTTCTTTTGCTAGTGGATATCCTTGGTAGATAGGAGTGGGGAAGGGTATTATTGAGGGATTTAGAGTGGGAAAGGAAAGAATACACCTATCCCACCTCTAGTTTGCTGATGACACTCTTTTCTCTTGTTCCTTGAGGCCATCTCGGGCCTTAAGATTAATAGAGAAAAGAGTTATATTATTGAGATAAATTGCGAGCCTTATAAACTGAACTCTTCTGGCATCTCTGGTGGGGTGTGAGGCGGGTAGTCTTCCCTCTTCTTATCTTGGGCTCTTGTTAGGTAGTAATCCAAAGAGAGTGTTGTTTGGAACCTAGTTCCGGAAAAGATTAAAAAATGTCTCTCTTCTTAAAAATGAGATTTATTTTCTAAGGAGGTTAAAACTAACTCCTAACCAGGTTTGGATGGAATACGAACCTACTATCTCTCTTTTATTAGAATCCATATTTCAGTGTAAAAATCTTGAGTAATCATGAGGGTTTTCTTTGGGAAGGAGCTCATGAGGGTGGGTCACACTTGGTTAGTTGGAAGTGGTCACGAAACCTTTAGTTCAGGGAGGTTTGGGCATTGGTTACTTGAGACTCCGCAATGAGGCCATGTTAGCTAAATGGTTGTGGCATTTTTTTTATGGAGCTTAACACTCAGTGGCATAGGATCGTTATGAGTACAGTTTGCACCCTTTCGAGTGGGCCTCGGTTCAAGGGTCCAAGGATGGGTAAAAAAATCTAGAATGCTAGTCTGTCAGGTTTCCCCTATTTCTTTCCATTTATGAAATGGTATCGAGGATGGCTTGGAAATTTATTTTTGGGGAGATAAACCTCTTTGTACATTGTTCCCTTGTTTGTATCATCTCTCTGATATGAGGTTGCATTTGGTGACCTCTATCATGCCTTCTCGGTCTCTTCCTCTTGCTCTCTGTGTCTAGGCTTTTATTGCCCTCTTTTGAATAAGGAAGCGACAGAGGTGGTAGCTTTTTCTTTCGTTGTTAGAGAATGACACGTTCTTCCGAGAAGGAGGCATATTTGTTTTTGGACTCCAACCCTACTGCGGCCTTTCTTGTAGTTCTTCCTTCCCGACCCTTTGTGTCCCTTCTTCCCCCTAGGAGCTGCATCTTCTTTTGTCTCTATTTGGAAGGTAAAGATCCCGAGCAGGTTAAATTCTTTGCATGACAGATTTTACTTGGGAGAACGAACACTTTGGATCGTGTTCAAAGGTGCTCTAATCTCTTGGTGGCCTCGAATTGGTGTTGTTTGTGTAAACGAGCTTTGGAGGATTTTGGCCATATCATTTGGAGATGTGAGTTTGCTCAAGCTCTTTGGAATTGAATGTTGGGGTCGTTTGGGATCTGTTGGATGCGGAATAAGGATTGTAGTTCTATGATGGAGGGGAGGTTCTTTCTAATCGTCCTTTATGTGAGAAGGGTTCCTTTGAGACTAGCTTTTTGCCATGTTGCGGGGTATTTGGCTTGAGAGAAATGACAAAATCTTTAAAGGTAAAGAAAGGTCGTGGGGAGAGGTGTAGGAAGGTGTTAGGTCAATACTACTTGGCATTTGTATCCCGATCCTTTTGTAATTATCAATTAGGGCTTATTCTTTTGGATTGAAGTTCATCTCTGCTTAGTTAGAGCTTTGGCTCCTCTCGGGTTTTTATTCGCCCCTTTTATATTCTTTCATGTTTCTCACCGGAAGCTTGGTTTTTCATTAAAAAAAAGCAAGTCATCACAAAAACTACAAGCTAACTAGACCCACATTTTTAGTGTTAACCATCAGTAAAGATAAGATGTTATTTTACTTTGATTACAATGTTAGAGAGACGTGAAAGCGAAAACCTAGATAGGATATTATTTTACTTTGGAGATTGGGCAAACTAAGCTCCTAAGCTCCCTTAAACATTACTTATGCTTGGGCTCAACCTACAAACCACATGTGAAGTGAGTTTTTGCTCATACCGTTCGAGTCGAAGAGTGGGGATGGTTTAGGAGAAATTGAGAAATCCAGTGGCAATTGGCTTGGTTGGTGATACAAAGAGCTTGTTTCCTCATTTGGCAATTGGGGCTTTACTTTGATCCCCAATTTTGTAATATTTTATTTTATCAATGAAGCACCTCAGAAAATAAAAAAATGGGATGAGAGTTAGTTTTTCTTTTTTAACAAGAAACACTTTTTATTGATAGACGAAAAGAAAGGAAAAGGTTCAAGGATACAAACTTTCAAAGGAGCGAAAAGAACAAACAACCAAACTAATGAAGCAAAAGTTTCCAAAAATTACGATGGCCAAAACAGAATATGGACGAGTAAATCACCCAAACAAAAAAAATATACCAGAAGCAAAGACCGCTTAAATGAAGAGCCGCTGAGCTAAAGACTAAAATACAACCAGCTTTGGAATAAAAAGCCAAGAAGACTTCGGCAAGAAAGGTTGATCCAATACCCTTAAAAGCATTAGGGTTTGAATTCCTATTGTTCCTTAGACTCACAGAGTGCCCCCCGAAGTTAAAGCCCCCTTGGCTAAGCTGATTTGGAAGGTCATTTTCCCAAAGAGAGTCCAAGTCTTTTTATGGAGTTTAGCCTACAAAAGTCTCAACACCCATGAGATCCTGCAAAAGAAGCTTTCAAATTTAGAGGTCTCAAGTTCAAACTTTCTGGTGAGCTTAATAACAAAAACCTTTGATGTCTTTCAGGTCCGGGCTTTGGGGCAAGCACGGGTGCCCCTGGGTATAGGGGTGCAAAGCTCCGACTCCCCGTTATAAAAAAAAAAAAAAACTTTCAAATTGGTGTGCTTCATCAACGGTGTGCTGTTTTTGCTACAAAGTACCGGAATCTGTGGACCACATTTTTCTTCACTGCCGTACAACTTCGGATTTGTGGTCTTTCTCGTTTAAAGAATTTGATTATGCTTGCTATATGCGTAAGGGGGTGGAAGTTTGGCTTCAGGAGGCCCTCGTGGGTAGTTTCCAAAGGCAAAAATTCTTTGGGGTTCTGCCGTTAGAGCCATCTTGTGGAGCCTTTGGAAAGAAAGAAATAGCCAGGATTTTTACAACATGACTCGTTCTTTTGATTCTTTATGTAATTGTGTACAAATTACTGCTTCTACTTGGTGTCTAAACCATGTCTTTTTCTTTAACTATAGTCTTATGATGCTTATACATGATTGGAAAATTGTGCTCTATTAGTTTTTTGTCGGGCGGGGGGCTCTCTCATCCCCCGGCCTTTAGGCTGTCCCTTTTTCTCAATATATTTCTTCATTTCCTATCAGAAGAGAAAGCAGTAGAAAGCGGAATTCCAGAAGTTCAAGTTCTTCAATAATGTTATTTAACCCTTTCATGCTGTTAGTTCTTCTCCCCCCACTAGATCATTTACATGACCAACAAATAATGTTGAAATCCCTCCAATACACCCAAGGTCTGTATAAGAATTCAGGGACTTTAACTGGTTTCATAGATGCTTTCTTTATGCATAATCTGTTGGACTATATACATTTGAAATCCATACTTTCTGGCTTAGAAAGGAGATCTTGATAGATATACAATAACTACCTTTCATGACTTCTGAAACACTGATTCTTATTTTCATCCCAAAGAATGAGCATGCCGGTGGAACTTTCCCATTATTCTACCATAGTCCAGCCAATATCTTTAGAATTCCATAAAGATTCGATCATTCTTCTATCAACCTTGTCAGGCTTCGATTACCAAATCTGGACAGTGAGAGTTAAAAGTCTTTGGGAGCAATAATCTTTTTTGAAGACCTCCGAGGCCTCTGGTGTCCCATGTATTATCTTCATACCTGCAGTTTGCTTAGCAACAAAAAATGATCAGTATTACAAAAATTAGATCCCTGTTACTGCTTTTGACCTTAATTTCAAATAAAGAAACAACTTTCTCAAAATATTTAGAAAAAATTGAAATTTCCATATTCCACTATAGGAACGTTGACCTCCTTTACAGCTTTTGAAGTGGTCTCAGCTAAAACAATCTCTGAATTTGGAGCCCTAGTGTTCTAATTAAGATCAATAGAAGGAATTTCTGACCTGTCCAATGCTTTATCCTCATTTAATAAGTTGAACAAACGTTCTTTGTACCTGTTTCTCATTGAAAAAAAAAACAAACAAACGTTCTTCATATGAGTCTTCATTGTATTAAAAGTTCGACTCTTCAGTTGCAAAAAAATTGCTCTTGGATTCAATGCTTCGTAATCTTTCCCATCTTATATCATTTGATCAATGATGTTGTTTNNNNNNNNNNNNNNNNAATATCAGATTTTTCGTTAAGATCATAATAATCATCCAAATATATCTTCTTAGAATTTTCACTGGTTGAGAAATTAGATCCTTTTGAAAGAGAGAAATTGATCTTGACTTTTGGGAGCTGCATGCATTAATTCCGCTGCCAATTGATGACCTTTCAGGGCTGATGTCTTACCTTTTTTAAAGAGATCTTCATGCAAAGAACAATCATTAATAATGCATGGCCCCTCTGTTTGACCAACCTCTTTATCCAATGGCAGTGAATTAAACTCATCATTTAACTCACCATTAAAATCCGTACTCAAATTTCTGCCGTTAATGTTTGCTTTATTCAGAAAGTTAAACCACCATACTTTCTTCGAGAACAGAATAGTGGAAAAGGCTCTGTTAAGAATCTTTTTGGGCTGAACTTTATTTTTAGAAAAAGAGATGACTTGTGGACTTCCAAAAGTATTCTTAATTGATTCCGAATTTGAATCAGTTATCACTTGCTCTATAGATCCGATTGAATAACAACTGCATCTAGGACTCATCAATAGTTACCCTTTCTTTCAAAGAAACAATTTCAAGTTTATTCACCAACTTTGAAATTGCATGCCAGCGGACTTTTCAGTTTCCACATGCTGTCTTCGGATAATTTTCTTAATTTGGCCTGAAAATTCATTCTCAGGTGAGGTCACTTGTCCTGGGCTTATTAGCATTACTTTTTTGAGTCTAGAAATAAGAACTTTTGCAAACACCTCGTATGGAAGTGAGACACATAGGGCTTATACTCAAACACCCTCTTGGCATTTTTTGTTTTTTGCTAAAGCACAGATTATGGGTTCACTTTCCTCCAAATCTCTAATATTTAAAGTTTCAAGTTAGCATTTTCATAAAATGATAATAGTCCCTCTCCTTTGGTTATTTGAAGACTCCCCCTTCTTGCCAATGATTGATGTCCTTAAGTTCTTAAACTCCTAAGCCTCTAAGGCCGATTTAATCCACTAATTAATTGATCAAATGTCTTACCTTTAAACTATCTACGCGAACATCTCCTTGTGCATTCCTCTTAAAGAAGTTGATGAAGTCATATTGGTTAGTGAAAAACCGGGGACAGCTTCATCTGGTAGACACTTATTTGAGATTGTTAACTGCTTCATTTCATAGTTACTACTCATTCCAGATTGTTGAGAAATCTGCATATTATTTGTCCTTCCTTATACTCTTTAGTATTAAGTTTGTATGGTTAAGTATAACACTTGGCTTCATAAGGCTATCCAAGAACAAGTCAAGTTGAATTGATTACTAAAATGAGTTGATTTTTGGTTGCAGCATTGATGTTATTTCTTCAGCCTTTGAGGGACAATCGGCTGTAAATCGGCAGAGGATGGTGTACAAAGCTATTTGGGAGGAGCTGCAGAGCACAGTGCATGCAGTGGATCAGATGACCACCAGAACACCCGCCGAAGCAGCAGTCAAGAATTCA

mRNA sequence

GCGATGGTTAGGGTTCCGCAAGTTGCGTTCCGTCGGGTTCTTCCACTGTTCGTTCACCGCGACGTACCCTTTTTGGTTGTCTCCCGGCAAATCACGACCAATTGCGTCCGCACCGCCGCCGCCGCTATTTCCTCCAGAACCACCACCAGTGTCCGTTGTAAGAGCAGTAATGTTGCAAAATATGGCTCTGCTAACGGAACGTTCTCGAAATGGGGTTCGAGTCGGAACTTGAGTATTAGAGCTACTCAAGTGAATGACTCCGGGTCTATCGATTCCCCACTCATGCAGTCAATGGAGAACAAGATTAAGGAACAACTAGATGCACAATCTGTCACTGTAAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTATTTCTTCAGCCTTTGAGGGACAATCGGCTGTAAATCGGCAGAGGATGGTGTACAAAGCTATTTGGGAGGAGCTGCAGAGCACAGTGCATGCAGTGGATCAGATGACCACCAGAACACCCGCCGAAGCAGCAGTCAAGAATTCA

Coding sequence (CDS)

GCGATGGTTAGGGTTCCGCAAGTTGCGTTCCGTCGGGTTCTTCCACTGTTCGTTCACCGCGACGTACCCTTTTTGGTTGTCTCCCGGCAAATCACGACCAATTGCGTCCGCACCGCCGCCGCCGCTATTTCCTCCAGAACCACCACCAGTGTCCGTTGTAAGAGCAGTAATGTTGCAAAATATGGCTCTGCTAACGGAACGTTCTCGAAATGGGGTTCGAGTCGGAACTTGAGTATTAGAGCTACTCAAGTGAATGACTCCGGGTCTATCGATTCCCCACTCATGCAGTCAATGGAGAACAAGATTAAGGAACAACTAGATGCACAATCTGTCACTGTAAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTATTTCTTCAGCCTTTGAGGGACAATCGGCTGTAAATCGGCAGAGGATGGTGTACAAAGCTATTTGGGAGGAGCTGCAGAGCACAGTGCATGCAGTGGATCAGATGACCACCAGAACACCCGCCGAAGCAGCAGTCAAGAATTCA

Protein sequence

AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAKYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDGRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS

Homology

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BLAST of MS017825 vs. NCBI nr
Match: XP_022159690.1 (protein BOLA4, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 327.8 bits (839), Expect = 5.8e-86
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK 60
           AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK
Sbjct: 2   AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK 61

Query: 61  YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG 120
           YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG
Sbjct: 62  YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG 121

Query: 121 RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS
Sbjct: 122 RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of MS017825 vs. NCBI nr
Match: XP_004143637.1 (protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothetical protein Csa_000569 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 4.9e-69
Identity = 146/176 (82.95%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQVAFRRVLP+F+ R+ PF VVSRQ+T+NCV T A  A I S +TT +R KSSNVA
Sbjct: 2   MIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNVA 61

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 62  KYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of MS017825 vs. NCBI nr
Match: XP_008467240.1 (PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-68
Identity = 144/176 (81.82%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQ+AFRRVLP+ + R+ PF VVSRQIT+NCV TAA  A I+S++ T +R KSSNV 
Sbjct: 3   MIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSNVV 62

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 63  KYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of MS017825 vs. NCBI nr
Match: XP_038906458.1 (protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-68
Identity = 144/176 (81.82%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VP VAFRRVLPLFVH + PF VVSRQIT+NCV  AA  AAI+S +TT VR KSSN+A
Sbjct: 3   MIKVPHVAFRRVLPLFVHHNQPFSVVSRQITSNCVCNAAVVAAITSTSTTGVRSKSSNLA 62

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           +Y  +NGTF KWGSSR+LSIRATQVN+SGSIDSPLM+SMENKIK+QLDAQSV+VKDAYGD
Sbjct: 63  RYSRSNGTFPKWGSSRSLSIRATQVNESGSIDSPLMKSMENKIKDQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA  NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAHNS 178

[Close]

BLAST of MS017825 vs. NCBI nr
Match: KAA0055158.1 (protein BOLA4 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 9.2e-68
Identity = 143/176 (81.25%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQ+AFRRVLP+ + R+ PF VVSRQIT+NCV TAA  A I+S++ T +R KSSNV 
Sbjct: 3   MIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSNVV 62

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 63  KYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

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BLAST of MS017825 vs. ExPASy Swiss-Prot
Match: Q9LF68 (Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BOLA4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-32
Identity = 87/158 (55.06%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 16  LFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAKYGSANGTFSKWGS-- 75
           LF     PF   S  +         +A+ SR  T+     S++  YG+     S +G+  
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRCVSAVLSRKETA----PSSI--YGNRVSRVSGFGALD 84

Query: 76  --SRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDGRHVSIDVISSA 135
             S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SVTV D  GDGRHV I+V+SSA
Sbjct: 85  IRSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSA 144

Query: 136 FEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE 170
           FEGQSAVNRQRMVYKAIWEELQ+ VHAVDQMTT+TP+E
Sbjct: 145 FEGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of MS017825 vs. ExPASy Swiss-Prot
Match: Q682I1 (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-04
Identity = 28/103 (27.18%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 85  NDSGSIDSPLMQSMENKIKEQLDAQSVTVKDA-------------YGDGRHVSIDVISSA 144
           +DSG+I++   + M  K++++L+   + ++D                D  H ++ ++S  
Sbjct: 60  SDSGAIENRASR-MREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKG 119

Query: 145 FEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKN 175
           FEG + V R R+VY  + EEL + +HA+  + ++TP+E+  K+
Sbjct: 120 FEGMNLVKRHRLVYHLLREELDTGLHAL-SIVSKTPSESPSKD 160

[Close]

BLAST of MS017825 vs. ExPASy TrEMBL
Match: A0A6J1DZG6 (protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026033 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-86
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK 60
           AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK
Sbjct: 2   AMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAK 61

Query: 61  YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG 120
           YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG
Sbjct: 62  YGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDG 121

Query: 121 RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS
Sbjct: 122 RHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of MS017825 vs. ExPASy TrEMBL
Match: A0A0A0KRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.4e-69
Identity = 146/176 (82.95%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQVAFRRVLP+F+ R+ PF VVSRQ+T+NCV T A  A I S +TT +R KSSNVA
Sbjct: 2   MIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNVA 61

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 62  KYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of MS017825 vs. ExPASy TrEMBL
Match: A0A1S3CT29 (protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504639 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.0e-69
Identity = 144/176 (81.82%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQ+AFRRVLP+ + R+ PF VVSRQIT+NCV TAA  A I+S++ T +R KSSNV 
Sbjct: 3   MIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSNVV 62

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 63  KYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of MS017825 vs. ExPASy TrEMBL
Match: A0A5A7UJH5 (Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.5e-68
Identity = 143/176 (81.25%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQ+AFRRVLP+ + R+ PF VVSRQIT+NCV TAA  A I+S++ T +R KSSNV 
Sbjct: 3   MIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSNVV 62

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           KY  ANGTF KWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 63  KYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAA +NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of MS017825 vs. ExPASy TrEMBL
Match: A0A6J1K139 (protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491454 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67
Identity = 140/176 (79.55%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 2   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSNVA 61
           M++VPQVAFRRVLPLFVHR+  F +VS+Q TTNCVRTAA  AAI++ T T V  KSSNV 
Sbjct: 6   MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTNCVRTAAVSAAITTTTATGVCSKSSNVL 65

Query: 62  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 121
           K+   NG FS WGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSV+VKDAYGD
Sbjct: 66  KFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 125

Query: 122 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA  +NS
Sbjct: 126 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAEAQNS 181

[Close]

BLAST of MS017825 vs. TAIR 10
Match: AT5G17560.1 (BolA-like family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 87/158 (55.06%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 16  LFVHRDVPFLVVSRQITTNCVRTAAAAISSRTTTSVRCKSSNVAKYGSANGTFSKWGS-- 75
           LF     PF   S  +         +A+ SR  T+     S++  YG+     S +G+  
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRCVSAVLSRKETA----PSSI--YGNRVSRVSGFGALD 84

Query: 76  --SRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGDGRHVSIDVISSA 135
             S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SVTV D  GDGRHV I+V+SSA
Sbjct: 85  IRSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSA 144

Query: 136 FEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE 170
           FEGQSAVNRQRMVYKAIWEELQ+ VHAVDQMTT+TP+E
Sbjct: 145 FEGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of MS017825 vs. TAIR 10
Match: AT1G55805.1 (BolA-like family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 28/103 (27.18%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 85  NDSGSIDSPLMQSMENKIKEQLDAQSVTVKDA-------------YGDGRHVSIDVISSA 144
           +DSG+I++   + M  K++++L+   + ++D                D  H ++ ++S  
Sbjct: 60  SDSGAIENRASR-MREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKG 119

Query: 145 FEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKN 175
           FEG + V R R+VY  + EEL + +HA+  + ++TP+E+  K+
Sbjct: 120 FEGMNLVKRHRLVYHLLREELDTGLHAL-SIVSKTPSESPSKD 160

[Close]

BLAST of MS017825 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 98  MENKIKEQLDAQSVTVKD--------------AYGDGR-HVSIDVISSAFEGQSAVNRQR 157
           +  K++++LD   + V+D              A  DG  H ++ ++S AF+G+S V R R
Sbjct: 285 IREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHR 344

Query: 158 MVYKAIWEELQSTVHAVDQMTTRTPAE 170
           ++Y  + +EL+S +HA+  +  +TPAE
Sbjct: 345 LIYDLLQDELKSGLHAL-SIVAKTPAE 370

The following BLAST results are available for this feature:

BLAST of MS017825 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159690.1	5.8e-86	100.00	protein BOLA4, chloroplastic/mitochondrial [Momordica charantia]	[more]
XP_004143637.1	4.9e-69	82.95	protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothe...	[more]
XP_008467240.1	1.9e-68	81.82	PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo]	[more]
XP_038906458.1	2.4e-68	81.82	protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida]	[more]
KAA0055158.1	9.2e-68	81.25	protein BOLA4 [Cucumis melo var. makuwa]	[more]

BLAST of MS017825 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF68	2.9e-32	55.06	Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BO...	[more]
Q682I1	4.4e-04	27.18	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]

BLAST of MS017825 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZG6	2.8e-86	100.00	protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0KRR5	2.4e-69	82.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1	[more]
A0A1S3CT29	9.0e-69	81.82	protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]
A0A5A7UJH5	4.5e-68	81.25	Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 ...	[more]
A0A6J1K139	4.9e-67	79.55	protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of MS017825 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17560.1	2.1e-33	55.06	BolA-like family protein	[more]
AT1G55805.1	3.1e-05	27.18	BolA-like family protein	[more]
AT4G26500.1	1.2e-04	31.03	chloroplast sulfur E	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 67..174 e-value: 7.9E-23 score: 82.7
None	No IPR available	PANTHER	PTHR46230:SF4	PROTEIN BOLA4, CHLOROPLASTIC/MITOCHONDRIAL	coord: 32..173
None	No IPR available	PANTHER	PTHR46230	FAMILY NOT NAMED	coord: 32..173
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 117..169 e-value: 1.0E-12 score: 48.2
IPR036065	BolA-like superfamily	SUPERFAMILY	82657	BolA-like	coord: 83..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017825.1	MS017825.1	mRNA