MS017729 (gene) Bitter gourd (TR) v1

Overview


Name	MS017729
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA helicase
Location	scaffold373: 1939643 .. 1944990 (+)
RNA-Seq Expression	MS017729
Synteny	MS017729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGGTGACAAGGGAAGACCAAGCAAAAGACCCAAATTCGGCAAGGTTTGTTTGGTTTTTAACTTTGGTTCGGTGTGTTTTTCTAGCAGAAATTTTGGTTTTTTTTTTTGTTATTGTATTGCGTAATAATGATCAATTGAGCAAAATTCAGGAGGATTTCAGGAAAGCTAATGTTGAAGAAGACGATGCCTTTTATCTTGACAAGTTCGACGACGACGATCGTAATGGTACAAATCTTCTATTCGTGTGATTTGAGGATATTTGGTTTTGTATTGATGGATTTGATTTATCTAATTATTTGGGGAGTGGGTTCTGGATATTGTGGATTCTGATTGATTTAGTGAAATTCTTGTTTATCCAAGGTGATAAAGAAGCAGAAAAGAGAGATTTCAGCAAATTAGAGTTAAAACCTGACCATGTTAATCGGCCTTTATGGGCTTGTGCTGATGGCCGCATATTCCTTGAAACCTTCTCGCCCTTGTACAAACAAGCTTATGATTTTCTTATTGCCATTGCCGAACCAGTTTGCAGGTAACTTAAATCTAATTGAAGCAGACACTTTTGGTGGATTCCAGTTATGATTTAGTCATTGTTAATTTCAGTATTCTAATTGATCAATATTCAGGCCAGAATCAATGCATGAATATAACCTCACTCCACATTCCTTATATGCTGCGGTTTCTGTTGGTCTGGAGACGGAAACGATTATTGCCGTTCTAAGTAAGTTGTCAAAGGCCAAACTCCCTAAAGAGATGATTGATTTCATTTATGGTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTGCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGCAAGTGCTCACTTAACTTGGTTCTTTGTTTTGATGGAAATACATGGTCTAGTCTTGATCGAGTGATCTCAATGGTTACATTTAATGGCTGCAGGTGTTGCAGAAACTGCTCCGGGATGAGGTTATATCCAAAGCCAGAATCATTTCTGAGGTATGGTCTTAACTGATGAGTTAATTACTGAAACGTAGTTGTTACCAACACATTTATTGTGAATTCTTCGGCTATACCTTCATCTTGATTTTATTGACATTGGAATCCATTAGGATTCTCGTGGAAATGGTGAATTTACAGTTAGCAAAGCAGCAGGTGAACTTGGCAATCGCCATGAAGGATTGCTCAATGAAGCAGAAGTTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCAGCACAAGTAATATGGTTTCTAACCTTTTAAATCTGATTGTCAACACATTGATGTTTAAAATTTTTGTCGTTCTTCCTCTCCTTATTTATTGTATTTTGGCTCTTGATCAAATGACAGGTCGAGAATGTAAAACAACGCTGCTTACCTAATGCCTTAAACTATCCCATGTTGGAAGAGTATGATTTCAGAAATGACACCGTGAGTCTTCCACCAAACAGTGATGTTGGAAAGAGAATTGTCTTAACTTTTAACTAATTTTAATATTTCTACATAAGAGGTCGGGATCTTATTTCAATAGTTTCTCCTGGATTTTTAGATCAATCCAGATTTGGATATGGAGCTGAAGCCTCAAGCTCAACCAAGGCCGTATCAGGAAAAGAGCCTTAGTAAAATGTTTGGAAATGGTTCGTTTTTCTTGTTACATGGTGTCTTTTTTTAGGGTTGCTTGTTATTGAGCTTATAGAAGTAATCTCAACACCCTATTTTACTCGCGTTTATTTTTTTCTTAAACAGTACGTTTTTAAAAGAAATAATCTTTTGGTTTATTCTGGTTCTCTTTTGGTTTCAAAATATGTTAAAGCTACAATTTTAGCACATTAGATGGTTATCATTAAATAGAAATTTATTTCTTATAAAAAAGAAATACATTCAGATGGACAATGTTTGTATTAACCAAAATATCCTCCTCTTTATCCTGTGAACTCTTTGGCCTCATATCCAGTTTAGGTAGCTTGGGGTTTCTCCCCTCTTTTGAGTTTTCCCAAATGCCTTAACTAAGAATGGTCAGTTATTTAGCTTCAAGCTCTGATTATGACTATATGTATGCAGGTAGAGCAAGATCTGGCATTATTGTACTGCCTTGTGGAGCTGGAAAGTCTCTGGTGGGTGTTTCTGCAGCAAGTCGTATCCGAAAAAGCTGTCTATGTTTAGCTACGAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGTTGTGGTCTACCATACGGGACGATCAAATTTGTCGTTTCACATCAGATAGTAAAGAAAGATTCCGAGGTAATGCTGGGGTGGTTGTGACAACTTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAAATTATCGAGGAGATAAGAAATAGAGAATGGGGATTACTTCTCATGGATGAGGTAATTTTACCATTTTTGTGTTCATCTATTTTTCTTTTAATTAGTCATGTTTTATACTGCAACTTTTTATTTTTTTTGATTCTAGGTGCACGTGGTTCCTGCTCTCATGTTTAGGAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGGTACATGACGTTACATGGTCTTTTAACCTTCTTGGTTTGTCTTTTCTATTGATAGTGAAAATTAACTTTGATTAATTTATTGCAGCCACACTTGTGAGAGAAGATGAAAGAATTACAGATTTGAATTTCCTTATTGGTCCTAAGTTGTATGAAGCGAACTGGTTGGATCTTGTTAAAGGAGGATTTATTGCAAACGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATTTGAAGAAAGAAAACTCAAAGAAAAAGCAGGTTTTATAATTATCAATGAAATTGATTTTTCTTCACCAGTCGAATTTATATACCCACCTTGCCTGTCCTATATTATTTCCTTGCCAAGAATCATGTTGTAGTTAACAAGGTAATATTAGATAGAGCCAGAGTGGTTTATTCTCATTAAAGGAGGTTCTTTCAATGTATTTTGGATTGTGGTATATTGCTAGAGCATTAATTGGGAAATATTGGAGATGTTATTAGGACATTAGTAGCGACATACTTGTAATTACTAAGGAAATTTTATTAGAGGGGATGGTTATATATAGTGGGAGTTAGGGGTTCGGGGGATAGAGAGCATTTTTGAGGAATTGGTCCGTGGGACTTGGGAGAAAGATAGCTCTCTCGAAGGGCTATTATCCCTTCCCTTGTAATTTCTCCTTCATAGTGTTATACGATTTCAGTGTTATTTTGTCATTGTAGGGTTCCTAACATATATCTGTCTGCCCTTAATAGATTTATTTGCTCTCTATCTCTTTGTGGTTATTTCCCTCTCTTATGTACTGGCTTTTGCATTCCAGGCTCTTTATATCATGAACCCCAATAAGTTCAGGGCATGTGAATTTCTCATTCGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTCTTTGCTGACAATCTTTTCGCCCTTACGGAGTATGCAATGAAGCTTCGTAAACCTATGATCTATGGTGCAACCAGGTTGTTAGATATAACTGTCTTAGCTTGAGAAAATATGACCTCAAATCTGTTGTTTGACATCCATATCTGGCTTTTCATTTTTCATTTTTTCAAATGTCTAGTCATATTGAGAGGACAAAAATTCTCGAAGCATTCAAAACTAGTCGTGATGTGAATACTGTTTTTCTCTCAAAGGTACTTTCCTCCTCTCACCATTCCCCTTTCCTTCCCCACTCTCAGTATATTACAATAATAATAAAGAAGGAAAAAAACCAGAATTAAATGAAGTTGGTTTTAGATTAGGCTAGTGGATCTGTTGTATTTTCTTTATCATCAAACAGCATATACCAATAACTGAAGTTTTACAATCGACTATGGTCTCTTGATGACTAGCCAGCTATCATGGTCAATAACTTGGCCACTGATATGTCCTTGGTTAAACTTTTATTCTTGTTTTTACTGAAATTAGTTGTGATTTTCAAATTGATCCCTGATTACACTGATCATGATTTAAATTTTAGTAGTCTGGAGTTGAGAATGTCATCTCAAGAGTTGGATCGATTTCTTTTATTTTATTTCAGGTAGGTGATAACTCTATCGATATTCCTGAGGCAAATGTGATTATTCAAATTTCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGGCGTATTCTTAGGGCCAAGGTAAAAAGGAAAAAATACATCAGCAGTTTAATCTGTGCAGTTCTTATGTTTCTGTTGTGCAGTTTGTAGGAATTAACTAGCATTTAATGACATGATTTTTTTAATTGGAACAACAGGGTAAACTTCAGGACAGGATGGCTGGAGGTAAAGAGGAGTATAATGCCTTCTTCTATTCACTTGTTTCTACTGATACTCAGGTAGAAATCTACCCCTTGTTTCTGGATGTGGTGTGGAGAAGTAATTTGTACCCTCTCTTGGTTTAATGATATACATACTTTTGAATATTAATGCAGGAAATGTACTATTCAACTAAAAGGCAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAATATTTGTCTCAGCATCTATAGGAGCTTGTTTATATATATTTTCTTGTAGAAGCGAAGTGTTTATCATGCAAAATTCTCGTTTCTATAGATTTATAGATTGATTCTCTGTTCATCCGCTGCACCGTGTAGTGAAATATATCGAGTCCTTCGTTATAGCCATTCATTTTATCTGGGGATTGGGTCTTGGCTTTCTGCTTGAACATTGTATAAATTGACATAATTTCTGACAGGTAATTACAAGCTTGCCACCAGCAGATGCGGGAGCTGATTTGAGCTATCATCGCCTCGATGATCAGTTGGCGCTTCTTGGAAAGGTTATCATCATCTCCATATATGTTCCATCCTCACTTTTCTTTGATGAAATTTTGACATGCTTTTATACGCCAGGTACTGAGTGCAGGTGACGATATGGTAGGATTAGAGCAATTGGAAGAAGATGCAGACCAGATTGCGCTTGATAAGGCTCGCCGTTCGAAGGGATCCATGAGTGCAATGTCGGGCGCAAATGGAATGGTTTACATGGAGTACAGGTATAGTATAAAGTATTTGTCCCATACCCCAAAATCTATTTGGTGAATGACATAATCTAGATGTAGATACGATATTAGCGGCTGACATTTTTTTCCATACGTTGGTCTCCAATTGTATGTTTTTCTTCTTTCAGTACCGGACGAAGACTCGCGGGTCAAGGCCAGATTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATCTGTTCAAAAAACGGTTCACT

mRNA sequence

TCAGGTGACAAGGGAAGACCAAGCAAAAGACCCAAATTCGGCAAGGAGGATTTCAGGAAAGCTAATGTTGAAGAAGACGATGCCTTTTATCTTGACAAGTTCGACGACGACGATCGTAATGGTGATAAAGAAGCAGAAAAGAGAGATTTCAGCAAATTAGAGTTAAAACCTGACCATGTTAATCGGCCTTTATGGGCTTGTGCTGATGGCCGCATATTCCTTGAAACCTTCTCGCCCTTGTACAAACAAGCTTATGATTTTCTTATTGCCATTGCCGAACCAGTTTGCAGGCCAGAATCAATGCATGAATATAACCTCACTCCACATTCCTTATATGCTGCGGTTTCTGTTGGTCTGGAGACGGAAACGATTATTGCCGTTCTAAGTAAGTTGTCAAAGGCCAAACTCCCTAAAGAGATGATTGATTTCATTTATGGTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTGCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGCAAGTGCTCACTTAACTTGGTTCTTTGTGTTGCAGAAACTGCTCCGGGATGAGGTTATATCCAAAGCCAGAATCATTTCTGAGGATTCTCGTGGAAATGGTGAATTTACAGTTAGCAAAGCAGCAGGTGAACTTGGCAATCGCCATGAAGGATTGCTCAATGAAGCAGAAGTTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCAGCACAAGTCGAGAATGTAAAACAACGCTGCTTACCTAATGCCTTAAACTATCCCATGTTGGAAGAGTATGATTTCAGAAATGACACCATCAATCCAGATTTGGATATGGAGCTGAAGCCTCAAGCTCAACCAAGGCCGTATCAGGAAAAGAGCCTTAGTAAAATGTTTGGAAATGGTTCAGCAAGATCTGGCATTATTGTACTGCCTTGTGGAGCTGGAAAGTCTCTGGTGGGTGTTTCTGCAGCAAGTCGTATCCGAAAAAGCTGTCTATGTTTAGCTACGAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGTTGTGGTCTACCATACGGGACGATCAAATTTGTCGTTTCACATCAGATAGTAAAGAAAGATTCCGAGGTAATGCTGGGGTGGTTGTGACAACTTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAAATTATCGAGGAGATAAGAAATAGAGAATGGGGATTACTTCTCATGGATGAGGTGCACGTGGTTCCTGCTCTCATGTTTAGGAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGCCACACTTGTGAGAGAAGATGAAAGAATTACAGATTTGAATTTCCTTATTGGTCCTAAGTTGTATGAAGCGAACTGGTTGGATCTTGTTAAAGGAGGATTTATTGCAAACGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATTTGAAGAAAGAAAACTCAAAGAAAAAGCAGGCTCTTTATATCATGAACCCCAATAAGTTCAGGGCATGTGAATTTCTCATTCGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTCTTTGCTGACAATCTTTTCGCCCTTACGGAGTATGCAATGAAGCTTCGTAAACCTATGATCTATGGTGCAACCAGTCATATTGAGAGGACAAAAATTCTCGAAGCATTCAAAACTAGTCGTGATGTGAATACTGTTTTTCTCTCAAAGGTAGGTGATAACTCTATCGATATTCCTGAGGCAAATGTGATTATTCAAATTTCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGGCGTATTCTTAGGGCCAAGGGTAAACTTCAGGACAGGATGGCTGGAGGTAAAGAGGAGTATAATGCCTTCTTCTATTCACTTGTTTCTACTGATACTCAGGAAATGTACTATTCAACTAAAAGGCAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAATTACAAGCTTGCCACCAGCAGATGCGGGAGCTGATTTGAGCTATCATCGCCTCGATGATCAGTTGGCGCTTCTTGGAAAGGTACTGAGTGCAGGTGACGATATGGTAGGATTAGAGCAATTGGAAGAAGATGCAGACCAGATTGCGCTTGATAAGGCTCGCCGTTCGAAGGGATCCATGAGTGCAATGTCGGGCGCAAATGGAATGGTTTACATGGAGTACAGTACCGGACGAAGACTCGCGGGTCAAGGCCAGATTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATCTGTTCAAAAAACGGTTCACT

Coding sequence (CDS)

TCAGGTGACAAGGGAAGACCAAGCAAAAGACCCAAATTCGGCAAGGAGGATTTCAGGAAAGCTAATGTTGAAGAAGACGATGCCTTTTATCTTGACAAGTTCGACGACGACGATCGTAATGGTGATAAAGAAGCAGAAAAGAGAGATTTCAGCAAATTAGAGTTAAAACCTGACCATGTTAATCGGCCTTTATGGGCTTGTGCTGATGGCCGCATATTCCTTGAAACCTTCTCGCCCTTGTACAAACAAGCTTATGATTTTCTTATTGCCATTGCCGAACCAGTTTGCAGGCCAGAATCAATGCATGAATATAACCTCACTCCACATTCCTTATATGCTGCGGTTTCTGTTGGTCTGGAGACGGAAACGATTATTGCCGTTCTAAGTAAGTTGTCAAAGGCCAAACTCCCTAAAGAGATGATTGATTTCATTTATGGTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTGCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGCAAGTGCTCACTTAACTTGGTTCTTTGTGTTGCAGAAACTGCTCCGGGATGAGGTTATATCCAAAGCCAGAATCATTTCTGAGGATTCTCGTGGAAATGGTGAATTTACAGTTAGCAAAGCAGCAGGTGAACTTGGCAATCGCCATGAAGGATTGCTCAATGAAGCAGAAGTTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCAGCACAAGTCGAGAATGTAAAACAACGCTGCTTACCTAATGCCTTAAACTATCCCATGTTGGAAGAGTATGATTTCAGAAATGACACCATCAATCCAGATTTGGATATGGAGCTGAAGCCTCAAGCTCAACCAAGGCCGTATCAGGAAAAGAGCCTTAGTAAAATGTTTGGAAATGGTTCAGCAAGATCTGGCATTATTGTACTGCCTTGTGGAGCTGGAAAGTCTCTGGTGGGTGTTTCTGCAGCAAGTCGTATCCGAAAAAGCTGTCTATGTTTAGCTACGAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGTTGTGGTCTACCATACGGGACGATCAAATTTGTCGTTTCACATCAGATAGTAAAGAAAGATTCCGAGGTAATGCTGGGGTGGTTGTGACAACTTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAAATTATCGAGGAGATAAGAAATAGAGAATGGGGATTACTTCTCATGGATGAGGTGCACGTGGTTCCTGCTCTCATGTTTAGGAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGCCACACTTGTGAGAGAAGATGAAAGAATTACAGATTTGAATTTCCTTATTGGTCCTAAGTTGTATGAAGCGAACTGGTTGGATCTTGTTAAAGGAGGATTTATTGCAAACGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATTTGAAGAAAGAAAACTCAAAGAAAAAGCAGGCTCTTTATATCATGAACCCCAATAAGTTCAGGGCATGTGAATTTCTCATTCGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTCTTTGCTGACAATCTTTTCGCCCTTACGGAGTATGCAATGAAGCTTCGTAAACCTATGATCTATGGTGCAACCAGTCATATTGAGAGGACAAAAATTCTCGAAGCATTCAAAACTAGTCGTGATGTGAATACTGTTTTTCTCTCAAAGGTAGGTGATAACTCTATCGATATTCCTGAGGCAAATGTGATTATTCAAATTTCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGGCGTATTCTTAGGGCCAAGGGTAAACTTCAGGACAGGATGGCTGGAGGTAAAGAGGAGTATAATGCCTTCTTCTATTCACTTGTTTCTACTGATACTCAGGAAATGTACTATTCAACTAAAAGGCAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAATTACAAGCTTGCCACCAGCAGATGCGGGAGCTGATTTGAGCTATCATCGCCTCGATGATCAGTTGGCGCTTCTTGGAAAGGTACTGAGTGCAGGTGACGATATGGTAGGATTAGAGCAATTGGAAGAAGATGCAGACCAGATTGCGCTTGATAAGGCTCGCCGTTCGAAGGGATCCATGAGTGCAATGTCGGGCGCAAATGGAATGGTTTACATGGAGTACAGTACCGGACGAAGACTCGCGGGTCAAGGCCAGATTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATCTGTTCAAAAAACGGTTCACT

Protein sequence

SGDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFVLQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIALDKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT

Homology

[Close]

BLAST of MS017729 vs. NCBI nr
Match: XP_022158845.1 (DNA repair helicase XPB1 [Momordica charantia])

HSP 1 Score: 1501.1 bits (3885), Expect = 0.0e+00
Identity = 765/775 (98.71%), Postives = 765/775 (98.71%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN
Sbjct: 4   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF
Sbjct: 184 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT
Sbjct: 724 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 769

[Close]

BLAST of MS017729 vs. NCBI nr
Match: XP_022928981.1 (DNA repair helicase XPB1-like isoform X1 [Cucurbita moschata] >XP_022969990.1 DNA repair helicase XPB1-like [Cucurbita maxima] >XP_023550801.1 DNA repair helicase XPB1-like [Cucurbita pepo subsp. pepo] >KAG6579520.1 General transcription and DNA repair factor IIH helicase subunit XPB1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016980.1 DNA repair helicase XPB1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 729/774 (94.19%), Postives = 748/774 (96.64%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGR SKRPKFGKED++KA+ EE+DA++ ++FDDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPDHTN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           +TIIAVLSKLSKAKLPKEMIDFIY ST+NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 DTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLLRDEVI +ARII EDS GNGEFT+SK AGELGNRHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLRDEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVL+AGDDMVGLEQLE+D DQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           DKARR  GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRF
Sbjct: 724 DKARRMTGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRF 768

[Close]

BLAST of MS017729 vs. NCBI nr
Match: XP_008437310.1 (PREDICTED: DNA repair helicase XPB1 [Cucumis melo])

HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 731/775 (94.32%), Postives = 749/775 (96.65%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GD+GRPSK+PKFGKED++KAN E+DD ++LD  DDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPDHAN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIY ST NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLL+DEVIS+ARII EDS GNGEFT+SK AGELG+RHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLKDEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGA+LSYHRLDDQLALLGKVL+AGDDMVGLEQLE+DADQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           DKARRS GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRFT
Sbjct: 724 DKARRSVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFT 768

[Close]

BLAST of MS017729 vs. NCBI nr
Match: XP_038874425.1 (general transcription and DNA repair factor IIH helicase subunit XPB1 [Benincasa hispida])

HSP 1 Score: 1441.4 bits (3730), Expect = 0.0e+00
Identity = 728/774 (94.06%), Postives = 747/774 (96.51%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGRPSK+PKFGKED++KA+ EEDD ++LD  DDDDR GDK+  KRDFSKLELKPDH N
Sbjct: 4   GDKGRPSKKPKFGKEDYKKASFEEDDVYHLDDLDDDDRYGDKDGGKRDFSKLELKPDHAN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIY ST NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLL+DEVI +ARII EDSRGNG+FT+SK AGELG+RHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLKDEVIGRARIIPEDSRGNGDFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGA+LSYHRLDDQLALLGKVL+AGDDMVGLEQLE+DADQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           DKARRS GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRF
Sbjct: 724 DKARRSMGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768

[Close]

BLAST of MS017729 vs. NCBI nr
Match: KAA0042740.1 (DNA repair helicase XPB1 [Cucumis melo var. makuwa])

HSP 1 Score: 1437.2 bits (3719), Expect = 0.0e+00
Identity = 731/776 (94.20%), Postives = 749/776 (96.52%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GD+GRPSK+PKFGKED++KAN E+DD ++LD  DDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPDHAN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIY ST NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLL+DEVIS+ARII EDS GNGEFT+SK AGELG+RHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLKDEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFK-VITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIA 721
           LIDQGYSFK VITSLPPADAGA+LSYHRLDDQLALLGKVL+AGDDMVGLEQLE+DADQIA
Sbjct: 664 LIDQGYSFKVVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIA 723

Query: 722 LDKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           LDKARRS GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRFT
Sbjct: 724 LDKARRSVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFT 769

[Close]

BLAST of MS017729 vs. ExPASy Swiss-Prot
Match: Q38861 (General transcription and DNA repair factor IIH helicase subunit XPB1 OS=Arabidopsis thaliana OX=3702 GN=XPB1 PE=2 SV=3)

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 658/776 (84.79%), Postives = 710/776 (91.49%), Query Frame = 0


Query: 1   SGDKGRPSKRPKF-GKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDH 60
           +G++GRP+K+ K+ GK+D +  N++  + +Y D  D+D R+G+ E +KRDF+KLELKPDH
Sbjct: 3   NGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKPDH 62

Query: 61  VNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 120
            NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL
Sbjct: 63  GNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 122

Query: 121 ETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWF 180
           ETETII+VL+KLSK KLPKEMI+FI+ STANYGKVKLVLKKNRY +ESPFPE        
Sbjct: 123 ETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPE-------- 182

Query: 181 FVLQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETH 240
            VL++LL D+VI++AR  SE   G   F+V +  GEL      LLNEAE AAAAEE+ETH
Sbjct: 183 -VLKRLLSDDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETH 242

Query: 241 SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSK 300
           SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSK
Sbjct: 243 SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSK 302

Query: 301 MFGNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRD 360
           MFGNG ARSGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRD
Sbjct: 303 MFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRD 362

Query: 361 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHV 420
           DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEE+RNREWGLLLMDEVHV
Sbjct: 363 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHV 422

Query: 421 VPALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV 480
           VPA MFRKVIS+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV
Sbjct: 423 VPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV 482

Query: 481 QCAEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFAD 540
           QCAEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFAD
Sbjct: 483 QCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFAD 542

Query: 541 NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVI 600
           NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVI
Sbjct: 543 NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVI 602

Query: 601 IQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ 660
           IQISSHAGSRRQEAQRLGRILRAKGKL+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ
Sbjct: 603 IQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ 662

Query: 661 QFLIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQI 720
           QFLIDQGYSFKVITSLPP DAG+ LSYH  ++QL+LLGKV++AGDD+VGLEQLEED D +
Sbjct: 663 QFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGM 722

Query: 721 ALDKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           AL KARRS GSMS MSG+ GMVYMEY++GR  +GQ Q K KPKDP KRH+LFKKR+
Sbjct: 723 ALQKARRSMGSMSVMSGSKGMVYMEYNSGRHKSGQ-QFK-KPKDPTKRHNLFKKRY 766

[Close]

BLAST of MS017729 vs. ExPASy Swiss-Prot
Match: Q9FUG4 (General transcription and DNA repair factor IIH helicase subunit XPB2 OS=Arabidopsis thaliana OX=3702 GN=XPB2 PE=2 SV=1)

HSP 1 Score: 1264.6 bits (3271), Expect = 0.0e+00
Identity = 644/774 (83.20%), Postives = 701/774 (90.57%), Query Frame = 0


Query: 3   DKGRPSKRPKF-GKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 62
           ++ RP+K+ K+ GK+D +  N++  + +Y D  D+D R+G+ E ++RDF+ LELKPDH N
Sbjct: 5   ERKRPTKKMKYGGKDDQKMKNIQNVEDYY-DDADEDSRDGEGEEKRRDFTDLELKPDHGN 64

Query: 63  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 122
           RPLWACADG+IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 65  RPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 124

Query: 123 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 182
           ETII+VL+KLSK KLP E+IDFI+ STANYGKVKLVLKKNRY +ESPFPE         V
Sbjct: 125 ETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPE---------V 184

Query: 183 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 242
           L++LL D+VI++AR  SE   G   FT+ K +GEL      LLNEAE+AAAAEE+ETHSF
Sbjct: 185 LKRLLSDDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSF 244

Query: 243 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 302
           EIDPA VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMF
Sbjct: 245 EIDPALVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMF 304

Query: 303 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 362
           GNG ARSGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWA+QFKLWSTI+DDQ
Sbjct: 305 GNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQ 364

Query: 363 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 422
           ICRFTSDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVP
Sbjct: 365 ICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVP 424

Query: 423 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 482
           A MFRKVIS+TKSHCKLGLTATLVREDE+ITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 425 AHMFRKVISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQC 484

Query: 483 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 542
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 485 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 544

Query: 543 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 602
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTS+ VNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 545 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQ 604

Query: 603 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 662
           ISSHAGSRRQEAQRLGRILRAKGKL+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 605 ISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 664

Query: 663 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 722
           LIDQGYSFKVITSLPP DAG+ L YH  ++QL+LLGKVL+AGDDMVGLEQLEED D  AL
Sbjct: 665 LIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKAL 724

Query: 723 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
            K RRS GSMSAMSGANG VYMEY++GR+ +G      KPKDP KRH++FKKR+
Sbjct: 725 -KTRRSMGSMSAMSGANGRVYMEYNSGRQKSGNQ--SKKPKDPTKRHNIFKKRY 765

[Close]

BLAST of MS017729 vs. ExPASy Swiss-Prot
Match: O00835 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Dictyostelium discoideum OX=44689 GN=repB PE=2 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 1.4e-232
Identity = 450/769 (58.52%), Postives = 543/769 (70.61%), Query Frame = 0


Query: 40  NGDKEAEKRDFSK-LELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRP 99
           + +++    D+SK   LK D+ +RP+W C DG IFLETFS +YKQA DFL+AIAEPVCRP
Sbjct: 56  SSEEKGSLLDYSKRCILKQDNKSRPIWVCPDGHIFLETFSAIYKQASDFLVAIAEPVCRP 115

Query: 100 ESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVL 159
           +++HEY LTP+SLYAAVSVGLET  II VL +LSK  LPKE+  F+   T +YGKVKLVL
Sbjct: 116 QNIHEYQLTPYSLYAAVSVGLETNDIITVLGRLSKLALPKEVEQFVRQCTQSYGKVKLVL 175

Query: 160 KKNRYLVESPFPEASAHLTWFFVLQKLLRDEVISKARI--ISEDSRGNGE--FTVSK--- 219
           +KN+Y VES +PE         VL+ LL+D  I+ ARI    E+S  + +  F ++K   
Sbjct: 176 QKNKYFVESAYPE---------VLEFLLKDSSIATARIKPTLEESVVDPKTGFIINKEVV 235

Query: 220 -----AAGELGN-------RHEGLLN----EAEVAAAAEERETHSFEIDPAQVENVKQRC 279
                + G   N       +++ L N    E E      ++  HSFEIDP QVE VK+RC
Sbjct: 236 TGAQISGGLQANQSLDPVLKNDALSNLLEEEEEDTVNNSDQHFHSFEIDPQQVEEVKKRC 295

Query: 280 LPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGSARSGIIVLPC 339
           +   L+YP+LEEYDFRNDT+NP+L+++LKP    RPYQEKSLSKMFGNG ARSGIIVLPC
Sbjct: 296 I--QLDYPVLEEYDFRNDTVNPNLNIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPC 355

Query: 340 GAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRG 399
           GAGKSL G++AA  ++KS L L T+AVSV+QW +QFKLWS I + QI +FTSD+KE+   
Sbjct: 356 GAGKSLSGITAACTVKKSILVLCTSAVSVEQWKYQFKLWSNIEERQISKFTSDNKEKISN 415

Query: 400 NAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPALMFRKVISLTKSH 459
            AGV +TTY MVAFGG+RS ES KI+ EI NREWGL+L+DEVHVVPA MFRKV+++TK+H
Sbjct: 416 VAGVTITTYTMVAFGGRRSAESLKIMNEITNREWGLVLLDEVHVVPAAMFRKVLTVTKAH 475

Query: 460 CKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAE 519
           CKLGLTATL+REDE+I DLNFLIGPKLYEANWLDL K GF+ANV C+EVWCPMT EF+ E
Sbjct: 476 CKLGLTATLLREDEKIQDLNFLIGPKLYEANWLDLQKAGFLANVSCSEVWCPMTAEFYKE 535

Query: 520 YLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 579
           YL  ++  KK+ LY MNPNKFRACE+LIRFHE QRGDKIIVF+DN++AL +YA  L +  
Sbjct: 536 YLINDSQGKKKLLYTMNPNKFRACEYLIRFHE-QRGDKIIVFSDNVYALQKYAKGLGRYF 595

Query: 580 IYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 639
           IYG TS  ER  IL  F+    V T+F+SKVGD SIDIPEA VIIQ+SSH GSRRQEAQR
Sbjct: 596 IYGPTSGHERMSILSKFQHDPTVRTIFISKVGDTSIDIPEATVIIQVSSHYGSRRQEAQR 655

Query: 640 LGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSL 699
           LGRILR K K  D +      YNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFKVI+ L
Sbjct: 656 LGRILRPKPK-SDGL------YNAFFYSLVSKDTQEMYYSTKRQQFLIDQGYSFKVISEL 715

Query: 700 PPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQI----------ALDKAR 759
           P  D   +L Y    DQL LL +VL  G+D    E LEED D I          A   +R
Sbjct: 716 PGIDQEVNLKYSSKQDQLDLLAQVLGEGEDSGKNEILEEDFDDITRGAKKSKSSAPTVSR 775

Query: 760 RSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKR 775
            + GS  A+SG N M YMEY          Q  +  K    +H LFK+R
Sbjct: 776 TTGGSTRALSGGNDMNYMEY----------QAPAIYKSIPTQHALFKQR 795

[Close]

BLAST of MS017729 vs. ExPASy Swiss-Prot
Match: Q60HG1 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Macaca fascicularis OX=9541 GN=ERCC3 PE=2 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 3.3e-213
Identity = 410/770 (53.25%), Postives = 526/770 (68.31%), Query Frame = 0


Query: 35  DDDDRNGDKEAEKRDFSKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEP 94
           D+     D+   K    ++ LK DH +RPLW   DG IFLE FSP+YK A DFL+AIAEP
Sbjct: 47  DESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEP 106

Query: 95  VCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKV 154
           VCRP  +HEY LT +SLYAAVSVGL+T  I   L KLSK  +P  ++ FI   T +YGKV
Sbjct: 107 VCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKV 166

Query: 155 KLVLKKNRYLVESPFPEASAHLTWFFVLQKLLRDEVISKARI------------------ 214
           KLVLK NRY VES  P+         V+Q LL+D VI + R+                  
Sbjct: 167 KLVLKHNRYFVESSHPD---------VIQHLLQDPVIRECRLRNSEGEATELITETFTSK 226

Query: 215 --ISEDSRGNGEFTVSKAAGELGNR---------HEGLLNEAEVAAAAEERETHSFEIDP 274
             IS+ + G+G  + S+     G           +E +  + E     EE +T SFE+  
Sbjct: 227 SAISKTAEGSGGPSTSRVTDPQGKSDIPMDLFDFYEQMDKDEE---EEEETQTVSFEVKQ 286

Query: 275 AQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGS 334
             +E +++RC+   L YP+L EYDFRND++NPD++++LKP A  RPYQEKSL KMFGNG 
Sbjct: 287 EMIEELQKRCI--HLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGR 346

Query: 335 ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRF 394
           ARSG+IVLPCGAGKSLVGV+AA  +RK CL L  +AVSV+QW  QFK+WSTI D QICRF
Sbjct: 347 ARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRF 406

Query: 395 TSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPALMF 454
           TSD+K++  G   V ++TY+M+    KRS E+E+++E ++ +EWGL+++DEVH +PA MF
Sbjct: 407 TSDAKDKPIG-CSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMF 466

Query: 455 RKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW 514
           R+V+++ ++HCKLGLTATLVRED++I DLNFLIGPKLYEANW++L   G+IA VQCAEVW
Sbjct: 467 RRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVW 526

Query: 515 CPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT 574
           CPM+ EF+ EY+  + +KK+  LY MNPNKFRAC+FLI+FHE +R DKIIVFADN+FAL 
Sbjct: 527 CPMSPEFYREYVAIK-TKKRILLYTMNPNKFRACQFLIKFHE-RRNDKIIVFADNVFALK 586

Query: 575 EYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSH 634
           EYA++L KP IYG TS  ER +IL+ FK +  +NT+F+SKVGD S D+PEANV+IQISSH
Sbjct: 587 EYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSH 646

Query: 635 AGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ 694
            GSRRQEAQRLGR+LRAK  +        EEYNAFFYSLVS DTQEM YSTKRQ+FL+DQ
Sbjct: 647 GGSRRQEAQRLGRVLRAKKGMV------AEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQ 706

Query: 695 GYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIALDKAR 754
           GYSFKVIT L   +   DL++   ++Q  LL KVL+A  D+   E++          +A 
Sbjct: 707 GYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQKVLAA-TDLDAEEEVVAGEFGSRSSQAS 766

Query: 755 RSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           R  G+MS+MSGA+  VYMEY +           S+ K P+K  H   KRF
Sbjct: 767 RRFGTMSSMSGADDTVYMEYHS-----------SRSKAPSKHVHPLFKRF 780

[Close]

BLAST of MS017729 vs. ExPASy Swiss-Prot
Match: Q7ZVV1 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Danio rerio OX=7955 GN=ercc3 PE=2 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 7.4e-213
Identity = 412/769 (53.58%), Postives = 525/769 (68.27%), Query Frame = 0


Query: 35  DDDDRNGDKEAEKRDFSKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEP 94
           D+     D+   K    ++ LK DH +RPLW   DG IFLE FSP+YK A DFL+AI+EP
Sbjct: 45  DESSTKLDEYGAKDYRLQMLLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAISEP 104

Query: 95  VCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKV 154
           VCRP   HEY LT +SLYAAVSVGL+T  II  L KLSK  +P  ++ FI   T +YGKV
Sbjct: 105 VCRPTHAHEYKLTAYSLYAAVSVGLQTSDIIEYLQKLSKTSVPDGIVQFIKLCTVSYGKV 164

Query: 155 KLVLKKNRYLVESPFPEASAHLTWFFVLQKLLRDEVISKARI------------------ 214
           KLVLK NRY VES FP+         V+Q+LL+D VI   R+                  
Sbjct: 165 KLVLKHNRYFVESAFPD---------VIQRLLQDTVIRDCRLRSAEGEETELITETISSK 224

Query: 215 --ISEDSRGNGEFTVSKAAG----------ELGNRHEGLLNEAEVAAAAEERETHSFEID 274
             IS+  + NG  + S+ A           ++ + +E +  E E     EE +T SFEI 
Sbjct: 225 SAISKSQQDNGGPSSSQPADGQRSGTQVPEDIFSYYEQMDKEEE---EEEETQTVSFEIR 284

Query: 275 PAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNG 334
              +E +++RC+   L YP+L EYDFRNDT+NPD++M+LKP A  RPYQEKSL KMFGNG
Sbjct: 285 QEMIEELQKRCI--QLEYPLLAEYDFRNDTVNPDINMDLKPTAVLRPYQEKSLRKMFGNG 344

Query: 335 SARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICR 394
            ARSG+IVLPCGAGKSLVGV+AA  +RK CL L  ++VSV+QW  QFK+WSTI D QICR
Sbjct: 345 RARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSSVSVEQWKAQFKMWSTIDDSQICR 404

Query: 395 FTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPALM 454
           FTSD+K++  G   V ++TY+M+    KRS E+E+++E ++++EWGL+++DEVH +PA M
Sbjct: 405 FTSDAKDKPIG-CSVAISTYSMLGHTTKRSWEAERVMEWMKSQEWGLIILDEVHTIPAKM 464

Query: 455 FRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEV 514
           FR+V+++ ++HCKLGLTATLVRED++I DLNFLIGPKLYEANW++L   G+IA VQCAEV
Sbjct: 465 FRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEV 524

Query: 515 WCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFAL 574
           WCPM+ EF+ EY+  + +KK+  LY MNPNKFRAC+FLIRFHE +R DKIIVFADN+FAL
Sbjct: 525 WCPMSPEFYREYVAIK-TKKRILLYTMNPNKFRACQFLIRFHE-RRNDKIIVFADNVFAL 584

Query: 575 TEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISS 634
            EYA++L KP IYG TS  ER +IL+ FK +  +NT+F+SKVGD S D+PEANV+IQISS
Sbjct: 585 KEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISS 644

Query: 635 HAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLID 694
           H GSRRQEAQRLGR+LRAK  +        EEYNA+FYSLVS DTQEM YSTKRQ+FL+D
Sbjct: 645 HGGSRRQEAQRLGRVLRAKKGMV------AEEYNAYFYSLVSQDTQEMAYSTKRQRFLVD 704

Query: 695 QGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIALDKA 754
           QGYSFKVIT L   +   DL +   D+Q  LL KVL+A D  +  E+     +     + 
Sbjct: 705 QGYSFKVITKLAGMEE-EDLMFSTRDEQQQLLQKVLAASD--LDAEEEVVMGEVGGKPQF 764

Query: 755 RRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKK 774
            R  G+MS+MSGA+  +YMEY   R         SK       H LFK+
Sbjct: 765 SRRAGTMSSMSGADDALYMEYQMPR--------GSKASVGKNIHPLFKR 779

[Close]

BLAST of MS017729 vs. ExPASy TrEMBL
Match: A0A6J1DWZ6 (DNA helicase OS=Momordica charantia OX=3673 GN=LOC111025309 PE=3 SV=1)

HSP 1 Score: 1501.1 bits (3885), Expect = 0.0e+00
Identity = 765/775 (98.71%), Postives = 765/775 (98.71%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN
Sbjct: 4   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF
Sbjct: 184 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT
Sbjct: 724 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 769

[Close]

BLAST of MS017729 vs. ExPASy TrEMBL
Match: A0A6J1I1I0 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469016 PE=3 SV=1)

HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 729/774 (94.19%), Postives = 748/774 (96.64%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGR SKRPKFGKED++KA+ EE+DA++ ++FDDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPDHTN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           +TIIAVLSKLSKAKLPKEMIDFIY ST+NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 DTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLLRDEVI +ARII EDS GNGEFT+SK AGELGNRHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLRDEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVL+AGDDMVGLEQLE+D DQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           DKARR  GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRF
Sbjct: 724 DKARRMTGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRF 768

[Close]

BLAST of MS017729 vs. ExPASy TrEMBL
Match: A0A6J1ELT7 (DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435717 PE=3 SV=1)

HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 729/774 (94.19%), Postives = 748/774 (96.64%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GDKGR SKRPKFGKED++KA+ EE+DA++ ++FDDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPDHTN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           +TIIAVLSKLSKAKLPKEMIDFIY ST+NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 DTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLLRDEVI +ARII EDS GNGEFT+SK AGELGNRHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLRDEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVL+AGDDMVGLEQLE+D DQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           DKARR  GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRF
Sbjct: 724 DKARRMTGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRF 768

[Close]

BLAST of MS017729 vs. ExPASy TrEMBL
Match: A0A1S3ATU9 (DNA helicase OS=Cucumis melo OX=3656 GN=LOC103482768 PE=3 SV=1)

HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 731/775 (94.32%), Postives = 749/775 (96.65%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GD+GRPSK+PKFGKED++KAN E+DD ++LD  DDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPDHAN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIY ST NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLL+DEVIS+ARII EDS GNGEFT+SK AGELG+RHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLKDEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 721
           LIDQGYSFKVITSLPPADAGA+LSYHRLDDQLALLGKVL+AGDDMVGLEQLE+DADQIAL
Sbjct: 664 LIDQGYSFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIAL 723

Query: 722 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           DKARRS GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRFT
Sbjct: 724 DKARRSVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFT 768

[Close]

BLAST of MS017729 vs. ExPASy TrEMBL
Match: A0A5A7THB1 (DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002390 PE=3 SV=1)

HSP 1 Score: 1437.2 bits (3719), Expect = 0.0e+00
Identity = 731/776 (94.20%), Postives = 749/776 (96.52%), Query Frame = 0


Query: 2   GDKGRPSKRPKFGKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 61
           GD+GRPSK+PKFGKED++KAN E+DD ++LD  DDDDRNGDKE  KRDFSKLELKPDH N
Sbjct: 4   GDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPDHAN 63

Query: 62  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 121
           RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 64  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 123

Query: 122 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 181
           ETIIAVLSKLSKAKLPKEMIDFIY ST NYGKVKLVLKKNRYLVESPFPE         V
Sbjct: 124 ETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPE---------V 183

Query: 182 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 241
           LQKLL+DEVIS+ARII EDS GNGEFT+SK AGELG+RHEGLLNEAE AAAAEERETHSF
Sbjct: 184 LQKLLKDEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSF 243

Query: 242 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 301
           EIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF
Sbjct: 244 EIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 303

Query: 302 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 361
           GNG ARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ
Sbjct: 304 GNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 363

Query: 362 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 421
           ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP
Sbjct: 364 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 423

Query: 422 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 481
           A MFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 424 AHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 483

Query: 482 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 541
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 484 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 543

Query: 542 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 601
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 544 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 603

Query: 602 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 661
           ISSHAGSRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 604 ISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 663

Query: 662 LIDQGYSFK-VITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIA 721
           LIDQGYSFK VITSLPPADAGA+LSYHRLDDQLALLGKVL+AGDDMVGLEQLE+DADQIA
Sbjct: 664 LIDQGYSFKVVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIA 723

Query: 722 LDKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRFT 777
           LDKARRS GSMSAMSGANGMVYMEYSTGR+LAGQGQ+KSKPKDPAKRHHLFKKRFT
Sbjct: 724 LDKARRSVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFT 769

[Close]

BLAST of MS017729 vs. TAIR 10
Match: AT5G41370.1 (homolog of xeroderma pigmentosum complementation group B 1 )

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 658/776 (84.79%), Postives = 710/776 (91.49%), Query Frame = 0


Query: 1   SGDKGRPSKRPKF-GKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDH 60
           +G++GRP+K+ K+ GK+D +  N++  + +Y D  D+D R+G+ E +KRDF+KLELKPDH
Sbjct: 3   NGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKPDH 62

Query: 61  VNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 120
            NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL
Sbjct: 63  GNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 122

Query: 121 ETETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWF 180
           ETETII+VL+KLSK KLPKEMI+FI+ STANYGKVKLVLKKNRY +ESPFPE        
Sbjct: 123 ETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPE-------- 182

Query: 181 FVLQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETH 240
            VL++LL D+VI++AR  SE   G   F+V +  GEL      LLNEAE AAAAEE+ETH
Sbjct: 183 -VLKRLLSDDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETH 242

Query: 241 SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSK 300
           SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSK
Sbjct: 243 SFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSK 302

Query: 301 MFGNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRD 360
           MFGNG ARSGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRD
Sbjct: 303 MFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRD 362

Query: 361 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHV 420
           DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEE+RNREWGLLLMDEVHV
Sbjct: 363 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHV 422

Query: 421 VPALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV 480
           VPA MFRKVIS+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV
Sbjct: 423 VPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANV 482

Query: 481 QCAEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFAD 540
           QCAEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFAD
Sbjct: 483 QCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFAD 542

Query: 541 NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVI 600
           NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVI
Sbjct: 543 NLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVI 602

Query: 601 IQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ 660
           IQISSHAGSRRQEAQRLGRILRAKGKL+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ
Sbjct: 603 IQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ 662

Query: 661 QFLIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQI 720
           QFLIDQGYSFKVITSLPP DAG+ LSYH  ++QL+LLGKV++AGDD+VGLEQLEED D +
Sbjct: 663 QFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGM 722

Query: 721 ALDKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
           AL KARRS GSMS MSG+ GMVYMEY++GR  +GQ Q K KPKDP KRH+LFKKR+
Sbjct: 723 ALQKARRSMGSMSVMSGSKGMVYMEYNSGRHKSGQ-QFK-KPKDPTKRHNLFKKRY 766

[Close]

BLAST of MS017729 vs. TAIR 10
Match: AT5G41360.1 (homolog of Xeroderma pigmentosum complementation group B 2 )

HSP 1 Score: 1264.6 bits (3271), Expect = 0.0e+00
Identity = 644/774 (83.20%), Postives = 701/774 (90.57%), Query Frame = 0


Query: 3   DKGRPSKRPKF-GKEDFRKANVEEDDAFYLDKFDDDDRNGDKEAEKRDFSKLELKPDHVN 62
           ++ RP+K+ K+ GK+D +  N++  + +Y D  D+D R+G+ E ++RDF+ LELKPDH N
Sbjct: 5   ERKRPTKKMKYGGKDDQKMKNIQNVEDYY-DDADEDSRDGEGEEKRRDFTDLELKPDHGN 64

Query: 63  RPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 122
           RPLWACADG+IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET
Sbjct: 65  RPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLET 124

Query: 123 ETIIAVLSKLSKAKLPKEMIDFIYGSTANYGKVKLVLKKNRYLVESPFPEASAHLTWFFV 182
           ETII+VL+KLSK KLP E+IDFI+ STANYGKVKLVLKKNRY +ESPFPE         V
Sbjct: 125 ETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPE---------V 184

Query: 183 LQKLLRDEVISKARIISEDSRGNGEFTVSKAAGELGNRHEGLLNEAEVAAAAEERETHSF 242
           L++LL D+VI++AR  SE   G   FT+ K +GEL      LLNEAE+AAAAEE+ETHSF
Sbjct: 185 LKRLLSDDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSF 244

Query: 243 EIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMF 302
           EIDPA VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMF
Sbjct: 245 EIDPALVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMF 304

Query: 303 GNGSARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQ 362
           GNG ARSGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWA+QFKLWSTI+DDQ
Sbjct: 305 GNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQ 364

Query: 363 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 422
           ICRFTSDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVP
Sbjct: 365 ICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVP 424

Query: 423 ALMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 482
           A MFRKVIS+TKSHCKLGLTATLVREDE+ITDLNFLIGPKLYEANWLDLVKGGFIANVQC
Sbjct: 425 AHMFRKVISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQC 484

Query: 483 AEVWCPMTKEFFAEYLKKENSKKKQALYIMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 542
           AEVWCPMTKEFFAEYLKKENSKKKQALY+MNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 485 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 544

Query: 543 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 602
           FALTEYAMKLRKPMIYGATSHIERTKILEAFKTS+ VNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 545 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQ 604

Query: 603 ISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 662
           ISSHAGSRRQEAQRLGRILRAKGKL+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF
Sbjct: 605 ISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQF 664

Query: 663 LIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLSAGDDMVGLEQLEEDADQIAL 722
           LIDQGYSFKVITSLPP DAG+ L YH  ++QL+LLGKVL+AGDDMVGLEQLEED D  AL
Sbjct: 665 LIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKAL 724

Query: 723 DKARRSKGSMSAMSGANGMVYMEYSTGRRLAGQGQIKSKPKDPAKRHHLFKKRF 776
            K RRS GSMSAMSGANG VYMEY++GR+ +G      KPKDP KRH++FKKR+
Sbjct: 725 -KTRRSMGSMSAMSGANGRVYMEYNSGRQKSGNQ--SKKPKDPTKRHNIFKKRY 765

The following BLAST results are available for this feature:

BLAST of MS017729 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158845.1	0.0e+00	98.71	DNA repair helicase XPB1 [Momordica charantia]	[more]
XP_022928981.1	0.0e+00	94.19	DNA repair helicase XPB1-like isoform X1 [Cucurbita moschata] >XP_022969990.1 DN...	[more]
XP_008437310.1	0.0e+00	94.32	PREDICTED: DNA repair helicase XPB1 [Cucumis melo]	[more]
XP_038874425.1	0.0e+00	94.06	general transcription and DNA repair factor IIH helicase subunit XPB1 [Benincasa...	[more]
KAA0042740.1	0.0e+00	94.20	DNA repair helicase XPB1 [Cucumis melo var. makuwa]	[more]

BLAST of MS017729 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38861	0.0e+00	84.79	General transcription and DNA repair factor IIH helicase subunit XPB1 OS=Arabido...	[more]
Q9FUG4	0.0e+00	83.20	General transcription and DNA repair factor IIH helicase subunit XPB2 OS=Arabido...	[more]
O00835	1.4e-232	58.52	General transcription and DNA repair factor IIH helicase subunit XPB OS=Dictyost...	[more]
Q60HG1	3.3e-213	53.25	General transcription and DNA repair factor IIH helicase subunit XPB OS=Macaca f...	[more]
Q7ZVV1	7.4e-213	53.58	General transcription and DNA repair factor IIH helicase subunit XPB OS=Danio re...	[more]

BLAST of MS017729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWZ6	0.0e+00	98.71	DNA helicase OS=Momordica charantia OX=3673 GN=LOC111025309 PE=3 SV=1	[more]
A0A6J1I1I0	0.0e+00	94.19	DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469016 PE=3 SV=1	[more]
A0A6J1ELT7	0.0e+00	94.19	DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435717 PE=3 SV=1	[more]
A0A1S3ATU9	0.0e+00	94.32	DNA helicase OS=Cucumis melo OX=3656 GN=LOC103482768 PE=3 SV=1	[more]
A0A5A7THB1	0.0e+00	94.20	DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002390 P...	[more]

BLAST of MS017729 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41370.1	0.0e+00	84.79	homolog of xeroderma pigmentosum complementation group B 1	[more]
AT5G41360.1	0.0e+00	83.20	homolog of Xeroderma pigmentosum complementation group B 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00851	XRODRMPGMNTB	coord: 62..82 score: 67.26 coord: 598..623 score: 90.38 coord: 726..745 score: 58.75 coord: 301..323 score: 91.3 coord: 270..296 score: 72.69 coord: 148..167 score: 77.5 coord: 408..428 score: 73.21 coord: 532..554 score: 72.28 coord: 512..527 score: 82.81 coord: 635..658 score: 88.02 coord: 474..496 score: 79.35 coord: 579..597 score: 78.29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 762..776
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 754..776
None	No IPR available	PANTHER	PTHR11274	RAD25/XP-B DNA REPAIR HELICASE	coord: 3..775
None	No IPR available	PANTHER	PTHR11274:SF17	DNA REPAIR HELICASE XPB1-LIKE	coord: 3..775
None	No IPR available	CDD	cd18029	DEXHc_XPB	coord: 281..450 e-value: 1.00156E-98 score: 300.757
None	No IPR available	CDD	cd18789	SF2_C_XPB	coord: 481..645 e-value: 1.54905E-83 score: 260.644
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 545..623 e-value: 3.0E-9 score: 46.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 517..683 score: 11.903161
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 285..466 e-value: 1.2E-19 score: 81.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 300..462 score: 18.060251
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 471..711 e-value: 3.5E-65 score: 221.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 279..470 e-value: 2.4E-35 score: 123.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 398..719
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 251..464
IPR032438	ERCC3/RAD25/XPB helicase, C-terminal domain	PFAM	PF16203	ERCC3_RAD25_C	coord: 470..718 e-value: 2.2E-115 score: 384.1
IPR001161	Helicase XPB/Ssl2	TIGRFAM	TIGR00603	TIGR00603	coord: 49..773 e-value: 0.0 score: 1179.5
IPR006935	Helicase/UvrB, N-terminal	PFAM	PF04851	ResIII	coord: 288..444 e-value: 1.8E-13 score: 50.9
IPR032830	Helicase XPB/Ssl2, N-terminal domain	PFAM	PF13625	Helicase_C_3	coord: 64..176 e-value: 1.3E-28 score: 99.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017729.1	MS017729.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0016787	hydrolase activity