MS017201 (gene) Bitter gourd (TR) v1

Overview
NameMS017201
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold33: 663443 .. 663532 (+)
RNA-Seq ExpressionMS017201
SyntenyMS017201
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGTCCTCTGCCATTGAATTGTTGGAAAATCAACATTGATGCTGCCTGGAATGAACATCGTTGTGTTGGAGGTTTGGGTTGGATCGTG

mRNA sequence

TGGAGTCCTCTGCCATTGAATTGTTGGAAAATCAACATTGATGCTGCCTGGAATGAACATCGTTGTGTTGGAGGTTTGGGTTGGATCGTG

Coding sequence (CDS)

TGGAGTCCTCTGCCATTGAATTGTTGGAAAATCAACATTGATGCTGCCTGGAATGAACATCGTTGTGTTGGAGGTTTGGGTTGGATCGTG

Protein sequence

WSPLPLNCWKINIDAAWNEHRCVGGLGWIV
Homology
[Close]
BLAST of MS017201 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 1   WSPLPLNCWKINIDAAWNEHRCVGGLGWIV 31
           WS  P NCWK+N DA+W+E R VGG+GWI+
Sbjct: 105 WSAPPTNCWKLNTDASWSEEREVGGIGWIL 134

[Close]
BLAST of MS017201 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-05
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 1   WSPLPLNCWKINIDAAWNEHRCVGGLGWIV 31
           WS  P NCWK+N DA+W+E R VGG+GWI+
Sbjct: 105 WSAPPTNCWKLNTDASWSEEREVGGIGWIL 134

The following BLAST results are available for this feature:
BLAST of MS017201 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143317.11.6e-0463.33uncharacterized protein LOC111013216 [Momordica charantia][more]
BLAST of MS017201 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS017201 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CQG07.8e-0563.33uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of MS017201 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS017201.1MS017201.1mRNA