MS016739 (gene) Bitter gourd (TR) v1

Overview
NameMS016739
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionselT-like protein
Locationscaffold563: 544524 .. 546627 (+)
RNA-Seq ExpressionMS016739
SyntenyMS016739
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCGCGCTCAGGTAGTTCTGTTAGGGTTGCCGATCTTTCTGCTTTTTACTGATATTGTGAACCTTTTCACTCCGCCGCCTCCTAAACCCGTCCATCGCCCTCCAGCTCGAGTTCACTACCAGCCTAAATCTCAAGCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGGTGAATGATTTCATGTTTGATTGAACTGTTCTTGATTTTTATTGTTCTTTTGTGGTAATTCAGCGACTTAATTTTGTCGTCTCGTTTTGGAATGCAGAAACGGAGCGGAAACGGAGGAATTGGCTACGGCAGCATTGTTAATATCAACTTCTGTGTTTCTTGTTCTTACAGGTAGTTCCTCCTTTGATTTCATTTTGTGCGGAAAGCGAGTGAATCAAACGTTTATGTGATTTTCCTTTCCTACTTTTTTCTCATCGACTCTTATTTCGCTAGCTGAATTTGCGGTGAACTAACAGTGAAGTAAAACAGATATTTCAATTTCGCTACTCTCTAGTGGCTGTTGAGAATTATTATGACGAAAAAATGGTTTTACTCTTGAATTTTCACTATTGTTGTTTTTTTTAAACCTCAGATTTTTTTTTTCTCTCCCTAAGCGCAGGTTTCTTTTATTATCTTTAACTTCCTCGATTGAACAATCATTTCGGGGTCTCTACTCTCTAGTGGTTGATTATGATGATAAATTGGTTGTACTTTGGAATCTTCGCTGTTGTTGTTCCTTTAAACTTGATTTCTTAGTTTTTTTTAGCGCAAGTTTCTTTTATCATCGTTAACTTCCTCGATTGAACAGATATTAAAATTTTTCTACTCTGTAGCGGTTGTTGAGTGTCATTATAATAATAAAAAAAAAAAAAACTTGTTGAACTCTTGAATCTTCACTGTTGTTCCTCTATGAATGTATTTTTCTTGTTAAAGACACGAGTCTTAAACGAACATAGTTGCAGACCTCAATTCAGAAATAATTTGTAATAATTCCATTTGGAGCCAACTTTACTGTGTTAGGTTATCTGATTTGGAACAAGACAGAGAAATGGAAGTTCCAATGTTTCAATAGTTGACACCTGCTGCTTGAGATTTTAATTGAACGAACTTATTTATAACTTCAATAGATTATGTTTTGCAAGCTCAATTTCGTATGGGCTGAAAAGCAGGTTAATGTTGCATGCTCGCTTAGCTTTGGGTCTGGGATAAAACATGAACAAGAGTTATTCTTATTATGATAGAATTTACTTCATAATTTTATCGTTGATACCCAAGATAATATGGAAGAGAATTTCATTCGTGATTCCAAGTGGGCCAATAGACTATGCCAATGTTCTCCATGGAGTAAATATTGTATCTTCCCTAATTGTACCAAAGAAACATCTGACAGGCACTAATTGAAGGTGTTAGTTATTTTGTAACCATAATTGTCTTTCAGTCTGTGAACTCTGATATGTGCTCAAGAGATTTTTCTTTTCCCTACAAGAAATGATAAGAAGCTGTGTGCATGCATTTGATCCATACGTTTTGGGGTTTGCTCTCTTAAATGTAGTTGGTTCGATCATATTATCTCGGTTTGTGGAAATGCTTGATGTTAAACGATTTTACACTTCTTGTGGCAGAGGTACTGCAATAACCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCACTCCCAAAGCGCCTTCTTAGCAAAGTAGTACCCGTTGTTCAATTTGGAATTATTGCAACAATAATGGCTGGCGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTACTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGTGATGGTGAAATGGTAAGATTCTTTTGAAAGCTTATTCTGGTGAGACGACTGTTTATTGATAATATCCTTTTGTCTGAAGGTCTTCTCTAAGTTGAAGGAGCAGAGATTTCCGGGTGAGATTGAGTTGAGAGATCTTATTGGAAGGAAACTTTCCGAGTCGAGAATCATTGACAATTCTGGAGGC

mRNA sequence

ATGGATCGCGCTCAGGTAGTTCTGTTAGGGTTGCCGATCTTTCTGCTTTTTACTGATATTGTGAACCTTTTCACTCCGCCGCCTCCTAAACCCGTCCATCGCCCTCCAGCTCGAGTTCACTACCAGCCTAAATCTCAAGCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAACGGAGCGGAAACGGAGGAATTGGCTACGGCAGCATTGTTAATATCAACTTCTGTGTTTCTTGTTCTTACAGAGGTACTGCAATAACCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCACTCCCAAAGCGCCTTCTTAGCAAAGTAGTACCCGTTGTTCAATTTGGAATTATTGCAACAATAATGGCTGGCGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTACTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGTGATGGTGAAATGGTCTTCTCTAAGTTGAAGGAGCAGAGATTTCCGGGTGAGATTGAGTTGAGAGATCTTATTGGAAGGAAACTTTCCGAGTCGAGAATCATTGACAATTCTGGAGGC

Coding sequence (CDS)

ATGGATCGCGCTCAGGTAGTTCTGTTAGGGTTGCCGATCTTTCTGCTTTTTACTGATATTGTGAACCTTTTCACTCCGCCGCCTCCTAAACCCGTCCATCGCCCTCCAGCTCGAGTTCACTACCAGCCTAAATCTCAAGCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAACGGAGCGGAAACGGAGGAATTGGCTACGGCAGCATTGTTAATATCAACTTCTGTGTTTCTTGTTCTTACAGAGGTACTGCAATAACCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCACTCCCAAAGCGCCTTCTTAGCAAAGTAGTACCCGTTGTTCAATTTGGAATTATTGCAACAATAATGGCTGGCGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTACTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGTGATGGTGAAATGGTCTTCTCTAAGTTGAAGGAGCAGAGATTTCCGGGTGAGATTGAGTTGAGAGATCTTATTGGAAGGAAACTTTCCGAGTCGAGAATCATTGACAATTCTGGAGGC

Protein sequence

MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKRSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG
Homology
BLAST of MS016739 vs. NCBI nr
Match: XP_022145727.1 (selT-like protein [Momordica charantia])

HSP 1 Score: 452.2 bits (1162), Expect = 2.6e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR
Sbjct: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG
Sbjct: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 223

BLAST of MS016739 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 202/224 (90.18%), Postives = 210/224 (93.75%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRPPARVHYQPKSQAVIQEPPEFPTEK 60
           MDR Q+VLLGLPIFLLFTDIVNLFTPPPPKP V+ PP RVHYQPKSQ+VIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAVNHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120
           RS  GGIG GS++NINFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAIAMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGII TIMAGE IFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           FEVYC+GEMVFSKLKEQRFPGEIELRDLIGRK+S SR +DNSGG
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKVSGSRFVDNSGG 224

BLAST of MS016739 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 199/223 (89.24%), Postives = 208/223 (93.27%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDR Q+VLLGLPIFLLFTDIVNLFTPPPPKPV+ PP RVHYQPKSQ VIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SG GGIG GS++NINFCVSCS+RGTAI MKNMLESSFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+I  I AGE IFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS  R +DN+GG
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGG 223

BLAST of MS016739 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 198/223 (88.79%), Postives = 207/223 (92.83%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDR Q+VLLGLPIFLLFTDIVNLFTPPPPKPV+ PP RVHYQPKSQ VIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SG G IG GS++NINFCVSCS+RGTAI MKNMLE SFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGIGEIGQGSVININFCVSCSFRGTAINMKNMLELSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+I  I AGE IFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS SR +DN+GG
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNAGG 223

BLAST of MS016739 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 199/224 (88.84%), Postives = 205/224 (91.52%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRPPARVHYQPKSQAVIQEPPEFPTEK 60
           MDR Q+VLLGLPI LLFTDIVNLFTPPPPKP  + PP RVHYQPKSQ VIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120
           RS  GGIG GS++NINFCVSCSYR TAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGII  IMAGE IFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           FEVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS  R +DNSGG
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGG 224

BLAST of MS016739 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-74
Identity = 138/215 (64.19%), Postives = 169/215 (78.60%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MD+ Q++LLGLPIFLL +D+ NLFTPPPPK  H+ P            I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKSQHQSPPS----------ISETLDFPAQKS 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           +   G+GYG+ V INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+KVV
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+I  IM GEQIFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSE 215
           FEV C+GE+VFSKLKE RFPGEIELRDLI   +++
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTK 202

BLAST of MS016739 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 49/145 (33.79%), Postives = 82/145 (56.55%), Query Frame = 0

Query: 72  VNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATI 131
           V  +FCVSC YR        +L   +PG+++   NYPP + + + ++V+ +V+  +I  +
Sbjct: 83  VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142

Query: 132 MAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFS 191
           ++G   FP LG+  P ++  + +NR  +    +LF N I+  LQS+GAFE+Y + E ++S
Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202

Query: 192 KLKEQRFPGEIELRDLIGRKLSESR 217
           KL+  R P   EL   I   L+  R
Sbjct: 203 KLESGRVPSPPELFQAIDSHLAIRR 227

BLAST of MS016739 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 54/221 (24.43%), Postives = 96/221 (43.44%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           M R+  +++GL       D+      PP +      +R+     S+      P    E  
Sbjct: 1   MSRSGAIIIGLFFIASIFDVFRAEKEPPAE-----DSRLEDYLSSELETTAIPTVVNENS 60

Query: 61  SGNGGIGYG-----SIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRL 120
                +  G       + I +CVSC Y+          +  +PG+ +   N+ P   K  
Sbjct: 61  HSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGC 120

Query: 121 LSKVVPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 180
           L+++V V + G+IA ++ G   F  +G   P    +   NRF      ++ GN  +S L 
Sbjct: 121 LAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGNLFESTLS 180

Query: 181 SSGAFEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESR 217
           S+GAFE++   + ++SK+ ++R P + E  +LI  +L   R
Sbjct: 181 STGAFEIFLGDKQIWSKISKERVPTQEEFLNLIDLQLKTIR 216

BLAST of MS016739 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 0

Query: 72  VNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATI 131
           + I +CVSC Y+          +  +P + +  AN+ P L K  +++ +  V+  ++  +
Sbjct: 87  LRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLV 146

Query: 132 MAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFS 191
           + G   F R G+  P        N+  S    ++ GN ++  L S+GAFEVY   E ++S
Sbjct: 147 LGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWS 206

Query: 192 KLKEQRFPGEIELRDLIGRKLS 214
           K++  R P   E   LI  +L+
Sbjct: 207 KIESGRVPSPQEFMQLIDAQLA 228

BLAST of MS016739 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 0

Query: 76  FCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATIMAGE 135
           +C SC YR        +L   +P ++V   NY PP     LSK++  ++  II ++++  
Sbjct: 48  YCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAV 107

Query: 136 QIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFSKLKE 195
             F  LG+  P W+  ++AN+  +    +  GN +++ L SSGAFE+  +   V+SKL+ 
Sbjct: 108 SPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVWSKLQT 167

Query: 196 QRFPGEIELRDLIGRKL 213
            RFP    L  +I   L
Sbjct: 168 GRFPSPEVLFQIIDNHL 184

BLAST of MS016739 vs. ExPASy TrEMBL
Match: A0A6J1CXI9 (selT-like protein OS=Momordica charantia OX=3673 GN=LOC111015112 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.2e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR
Sbjct: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG
Sbjct: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 223

BLAST of MS016739 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 199/223 (89.24%), Postives = 208/223 (93.27%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDR Q+VLLGLPIFLLFTDIVNLFTPPPPKPV+ PP RVHYQPKSQ VIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SG GGIG GS++NINFCVSCS+RGTAI MKNMLESSFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+I  I AGE IFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS  R +DN+GG
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGG 223

BLAST of MS016739 vs. ExPASy TrEMBL
Match: A0A6J1IZR1 (selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482133 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 198/223 (88.79%), Postives = 207/223 (92.83%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MDR Q+VLLGLPIFLLFTDIVNLFTPPPPKPV+ PP RVHYQPKSQ VIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           SG G IG GS++NINFCVSCS+RGTAI MKNMLE SFPGVEVILANYPPPLPKRLLSKVV
Sbjct: 61  SGIGEIGQGSVININFCVSCSFRGTAINMKNMLELSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+I  I AGE IFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           EVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS SR +DN+GG
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNAGG 223

BLAST of MS016739 vs. ExPASy TrEMBL
Match: A0A0A0LCS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 199/224 (88.84%), Postives = 205/224 (91.52%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRPPARVHYQPKSQAVIQEPPEFPTEK 60
           MDR Q+VLLGLPI LLFTDIVNLFTPPPPKP  + PP RVHYQPKSQ VIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120
           RS  GGIG GS++NINFCVSCSYR TAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGII  IMAGE IFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           FEVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS  R +DNSGG
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGG 224

BLAST of MS016739 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 197/224 (87.95%), Postives = 207/224 (92.41%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRPPARVHYQPKSQAVIQEPPEFPTEK 60
           MDR ++VLLGLPIFLLFTDIVNLFTPPPPKP  + PP RVHYQPKSQ+VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120
           RS  GGIG GS++NINFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIATIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGII  I+AGE IFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNSGG 224
           FEVYC+GEMVFSKLKEQRFPGEIELRDLIGRKLS SR +DNSGG
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGG 224

BLAST of MS016739 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type )

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-82
Identity = 150/226 (66.37%), Postives = 185/226 (81.86%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRP--PARVHYQPKSQAVIQEPPEFPT 60
           MDRAQ++LLGLPIFL  +D+ NLFTPPPPKP  HRP  P  + +Q +  A+I E  +FP+
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  EKRSGNGG-IGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLL 120
           +K SG GG IGYG+ V INFCVSCSY+GTA+TMK MLE++FPG++VILANYPPP PKRLL
Sbjct: 61  QKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLL 120

Query: 121 SKVVPVVQFGIIATIMAGEQIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 180
           +KVVPVVQ G+I  I+AG++I P +G+  PP W++SLRANRFGS+ASTWL GNF+QS+LQ
Sbjct: 121 AKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQ 180

Query: 181 SSGAFEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNS 222
           SSGAFEV+C+GE VFSKLKE RFPGEIELRDLI + L+   I+  S
Sbjct: 181 SSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 226

BLAST of MS016739 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type )

HSP 1 Score: 297.7 bits (761), Expect = 7.6e-81
Identity = 146/225 (64.89%), Postives = 181/225 (80.44%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKP-VHRP--PARVHYQPKSQAVIQEPPEFPT 60
           MDRAQ++LLGLPIFL  +D+ NLFTPPPPKP  HRP  P  + +Q +  A+I E  +FP+
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  EKRSGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLS 120
           +     G IGYG+ V INFCVSCSY+GTA+TMK MLE++FPG++VILANYPPP PKRLL+
Sbjct: 61  QTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLLA 120

Query: 121 KVVPVVQFGIIATIMAGEQIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQS 180
           KVVPVVQ G+I  I+AG++I P +G+  PP W++SLRANRFGS+ASTWL GNF+QS+LQS
Sbjct: 121 KVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQS 180

Query: 181 SGAFEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSESRIIDNS 222
           SGAFEV+C+GE VFSKLKE RFPGEIELRDLI + L+   I+  S
Sbjct: 181 SGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 225

BLAST of MS016739 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor )

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75
Identity = 138/215 (64.19%), Postives = 169/215 (78.60%), Query Frame = 0

Query: 1   MDRAQVVLLGLPIFLLFTDIVNLFTPPPPKPVHRPPARVHYQPKSQAVIQEPPEFPTEKR 60
           MD+ Q++LLGLPIFLL +D+ NLFTPPPPK  H+ P            I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKSQHQSPPS----------ISETLDFPAQKS 60

Query: 61  SGNGGIGYGSIVNINFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120
           +   G+GYG+ V INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+KVV
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIATIMAGEQIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+I  IM GEQIFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCDGEMVFSKLKEQRFPGEIELRDLIGRKLSE 215
           FEV C+GE+VFSKLKE RFPGEIELRDLI   +++
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTK 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145727.12.6e-123100.00selT-like protein [Momordica charantia][more]
XP_038903844.13.3e-11090.18selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Beninca... [more]
XP_022935564.13.3e-11089.24selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurb... [more]
XP_022983567.12.8e-10988.79selT-like protein [Cucurbita maxima][more]
XP_004137713.14.0e-10888.84selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 ... [more]
Match NameE-valueIdentityDescription
Q9STZ21.8e-7464.19SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2[more]
Q9BN191.1e-2033.79Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=510... [more]
Q198922.7e-1424.43Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis el... [more]
Q9U3N51.0e-1327.46Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis el... [more]
Q9VMV62.3e-1331.39Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanoga... [more]
Match NameE-valueIdentityDescription
A0A6J1CXI91.2e-123100.00selT-like protein OS=Momordica charantia OX=3673 GN=LOC111015112 PE=4 SV=1[more]
A0A6J1F5S61.6e-11089.24selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1[more]
A0A6J1IZR11.3e-10988.79selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482133 PE=4 SV=1[more]
A0A0A0LCS31.9e-10888.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1[more]
E5GBE63.3e-10887.95Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G58640.14.0e-8266.37Selenoprotein, Rdx type [more]
AT5G58640.27.6e-8164.89Selenoprotein, Rdx type [more]
AT3G47300.11.3e-7564.19SELT-like protein precursor [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 155..211
e-value: 1.3E-8
score: 36.6
NoneNo IPR availablePANTHERPTHR13544:SF12SELT-LIKE PROTEINcoord: 1..221
IPR011893Selenoprotein, Rdx-typeTIGRFAMTIGR02174TIGR02174coord: 72..209
e-value: 2.3E-23
score: 80.3
IPR011893Selenoprotein, Rdx-typePFAMPF10262Rdxcoord: 72..208
e-value: 1.6E-15
score: 57.1
IPR019389Selenoprotein TPANTHERPTHR13544SELENOPROTEIN Tcoord: 1..221
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 70..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016739.1MS016739.1mRNA