MS016214 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTTGGCAGCAGATGATTTTTCCCGTACGCCGTGTTTGGCTCGCCGTTTATGCCCGCCTTAAAAATCCCAAAAACGGTGAGTTTTTACTTTCTATGCCCTTCCCGATCAGACGAATTAAAATTACAACCAAAACCTTCTCCTCATTTATTCATTTTTTCTTAATTTTATTTTCGATTAAAAATCATAGTTATTTATATTTTAAGGTTACTTATATAGTACTTTAGGTTGATTTTCAAATTTTTTAATTTAGTTTCCATAATTATTGTTTGATTTCGATTTGGTTTATATAATTTTAAAAAGTTTTCCTTTGATCCTTGTGGTAGAGTTAAATATCATGAATGGTTCTCAAAAACTGAACCTATTTTCTCTTACTTTTACTTAGCCCTAGACAAACTAGTACGATCAACTCATCCAATTAATTAAATAGAAAATATTAATTTATTGCCTCACAAAAAAAAGTATCACATCTCCCGATTTTTAGATTTAGTAAAATTGTAGGATCAAAGTATGAACTATAAAGACAAATTTTAAGTCATCAATTGGAAGACTAAATTCGTAATTTACACCGTATTTGACCTTTTGATTAAAAAAAAATAGAACTATTAAAAAATATAACTTTTAATGATCCAAAATTTGCCGTCTCCATTTAATTTTTTTGTATTTAAATATTAATAACAGACAAAATACTCTTTCTTTATAGAAAGGAGAAGAGAATTTTATGTATTAATCAAATTAAATTTTGCTATTCATTATAATTTCTATGGGGAGATTAAATTAAATTATATGGATTCAACGGTTATTACCGGACATCAAAATTTGGGTTCTGGATGAAATGATAAGATAATTTATTAATATTGTAATTGAAAATAAATCATGTCAGTTCTTCTTTTGATATTATAAATTTTACAAAGAGAAAAAACTATCTGAAAAGATACCGACACGTCAGCAATTAAATGGGTGTATTATATAGTTGAAATTCCTTGAGTCGGTTGGTGATTAGTTCTAATCATAATTTAATTGAGTTTAGGGACATTAAAAATAAATAAATAAAGATCAAATCCCAAGTGGGAAAAGATCTACTAGACCGACCCCCACTTTNTAGGGAAAAAAAAAAAAGAGAGCTAGCCCCTAAAAAATCTTTAATTGTTTTTTTTTAAATAAAAATGAAAAAAAGCAAGATGGGAGAATTCGAACTAAACTTTAGTTTGGGTTAGATATCGATTTATTTATAATTTTCTTATTCTTTTAATTTTTTAAAGATTATATATTTTAGGTGAAAGGTTAAACTACTCATGTACGAGAGTAGTAAATACCTTATTTTTTTTCTAAAATTTTTTAAATATTGTATTTTAGTTTATTCATTATACACGATGTTAATTAATAATAATTATTTAGGATTATCCTAAAAATTCAAAGTATTAATTAAAGTGACCTGAAAAATTCCACTTTGTAAAAATTGTAATTAATTAAGTAACTTTATAAAGTTGGTTTGGATAAACATCTTTTTCACTCAAAGCCTTTTTGATGCCCCCTTAGTCACAAAAGCATTGTCAATGGCTTGAAAAAGAGGAATCAACATCACAAATCACCTCCTCTCTCTCTTTTTCTCCCTTTTTTTTTTTCTTTTCCCAATTACTATTCTTCTTTTAGGGGGAAAAATGCTTCCAACAAGGAATCAGGTCCACTTGGCTGACCCTTTTGGACCACTTCTTCTTGTTGGGCATCTATATTCTGAGTTTATTAGGTTTGGTTAAATCTCATTTGTTTGTTTGGAGAAAAATAATCGAAAAAATAAGTTATGCGAGTTTAGTGAGAAAATCTTTTTTTTTTAATACAATATGTGGGGATGAGAGATCGAACTCACGACCGAGGTCGGAGGGCTCACATTGGTACAGTGAGAAAATTTCATAGATTTTCCTTTTGTTATTGTATTTATTATGTTTCCTTCCTGGTTGGTTTCCTAATTCTTTTAATTTTAGGCAAACATTGAACATGTTTTATATGTATATATGTGTATCAATTAGATCAACGAGTAACTGAGTGAAAAATCCCTAATTTGTCACGATACCTTGGTATTACTATTGTATTTAGTATTTGTTTGAATTAGGTAAAGACAAACCATTTTAATGTGCTCATAGTTCAGTAATTAATACTTGCTCTTTTCTTGGAGGTCGGAAGTTCGAACCTCCATACCTTCAAGTGTTATCAAACGGACCGTAAATGATTCCTAACTTGTTGCTTGCGGTTAACAGATGAAGGACTTTTGAAACTTCACGACGATGTAGAAACATGCGGCTATCAAGATGTGAAGGTGATGTGGGAGATACTAAGTAGATCAGAAACCGAGCTGATAAATCACCACCACCAAATAAGGCGGAAGCACAAATCTTTTTGGAAGCCTTTGGTGTGGTCTAACCCTAACTCTAACCATGATCCAGTTAGAACAACAACTTTTCCAACTTTCGACCCAATTTCA ATGGGATTTTGGCAGCAGATGATTTTTCCCGTACGCCGTGTTTGGCTCGCCGTTTATGCCCGCCTTAAAAATCCCAAAAACGATGAAGGACTTTTGAAACTTCACGACGATGTAGAAACATGCGGCTATCAAGATGTGAAGGTGATGTGGGAGATACTAAGTAGATCAGAAACCGAGCTGATAAATCACCACCACCAAATAAGGCGGAAGCACAAATCTTTTTGGAAGCCTTTGGTGTGGTCTAACCCTAACTCTAACCATGATCCAGTTAGAACAACAACTTTTCCAACTTTCGACCCAATTTCA ATGGGATTTTGGCAGCAGATGATTTTTCCCGTACGCCGTGTTTGGCTCGCCGTTTATGCCCGCCTTAAAAATCCCAAAAACGATGAAGGACTTTTGAAACTTCACGACGATGTAGAAACATGCGGCTATCAAGATGTGAAGGTGATGTGGGAGATACTAAGTAGATCAGAAACCGAGCTGATAAATCACCACCACCAAATAAGGCGGAAGCACAAATCTTTTTGGAAGCCTTTGGTGTGGTCTAACCCTAACTCTAACCATGATCCAGTTAGAACAACAACTTTTCCAACTTTCGACCCAATTTCA MGFWQQMIFPVRRVWLAVYARLKNPKNDEGLLKLHDDVETCGYQDVKVMWEILSRSETELINHHHQIRRKHKSFWKPLVWSNPNSNHDPVRTTTFPTFDPIS Homology
BLAST of MS016214 vs. NCBI nr
Match: XP_022983947.1 (uncharacterized protein LOC111482415 [Cucurbita maxima]) HSP 1 Score: 170.2 bits (430), Expect = 8.9e-39 Identity = 81/106 (76.42%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MS016214 vs. NCBI nr
Match: XP_004137647.1 (uncharacterized protein LOC101215661 [Cucumis sativus] >KGN58642.1 hypothetical protein Csa_002613 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 2.0e-38 Identity = 82/104 (78.85%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of MS016214 vs. NCBI nr
Match: XP_022934534.1 (uncharacterized protein LOC111441680 [Cucurbita moschata]) HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37 Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MS016214 vs. NCBI nr
Match: KAG7018111.1 (hypothetical protein SDJN02_19979 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37 Identity = 79/106 (74.53%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MS016214 vs. NCBI nr
Match: XP_011466987.1 (PREDICTED: uncharacterized protein LOC101292722 [Fragaria vesca subsp. vesca]) HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of MS016214 vs. ExPASy TrEMBL
Match: A0A6J1J0R9 (uncharacterized protein LOC111482415 OS=Cucurbita maxima OX=3661 GN=LOC111482415 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.3e-39 Identity = 81/106 (76.42%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MS016214 vs. ExPASy TrEMBL
Match: A0A0A0LD54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710210 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 9.7e-39 Identity = 82/104 (78.85%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of MS016214 vs. ExPASy TrEMBL
Match: A0A6J1F2W0 (uncharacterized protein LOC111441680 OS=Cucurbita moschata OX=3662 GN=LOC111441680 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.2e-38 Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MS016214 vs. ExPASy TrEMBL
Match: A0A2P6RV40 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131671 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.3e-24 Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of MS016214 vs. ExPASy TrEMBL
Match: A0A6J1CR01 (uncharacterized protein LOC111013423 OS=Momordica charantia OX=3673 GN=LOC111013423 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.1e-24 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of MS016214 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.3e-07 Identity = 28/78 (35.90%), Postives = 41/78 (52.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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