MS015150 (gene) Bitter gourd (TR) v1

Overview


Name	MS015150
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquitin-conjugating enzyme
Location	scaffold2: 1473433 .. 1476019 (+)
RNA-Seq Expression	MS015150
Synteny	MS015150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCCGGTGAGGATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGATTTCAAGAGGTTGCAACAAGATCCGCCTGCCGGCATCAGTGGTGCTCCTCAAGACAATAATATCATGCTATGGAATGCTGTTATATTTGGGTACGCTGGGGAAATAAATTACTACCGTGGTTTTTTTTTTAAAAAAAAAATCAGAATTTTCGTACATATCCATAATTGCTTCTGTTACTAACTGATGCTATGGTCTTTTACTTTTTTTCCGTTGGCTTCTGCAGGCCAGATGATACACCTTGGGATGGAGGTATTCTCAATTTCTGGCTGGGGCTAATTGCTAAAATGACTTATTAGGATGATGAAAATGTTGTGATCAGGATCAAGTCTTCTAACGATTTATTTATTTCTTATTTGATGATTTCACTTCGTTTTTCTGTCCAAAACTATAATTAATGATGATGCATTTTTACTGCACATAAAAGCATTTTCACTTCTACCAATTATGTAGAGATATGTTTTGGCTGTATAGCTATTAGCCTAGTAGGGTTAAATTAATTTGCCAATTTTAAAATTATCTGGCGCTGATATGCATAATATTGTATATTTTTATGTTTCTTGGTCTTCTTTGTAAGCTCGTTCCACTAATGGATATGGGGTGTGTGTTGCATTTTTTGGTGGAAAGCTTGAGAATCATTAGAACTTGCTAAATTCTGATGGGTATGGGGCTGTGCCTTGTGTTCCTTGTTGAATTGTTATCTGGTGGAAAAATACTTTAGAACTTTAAATGCGAAATATCAAGTTGCTTTCATCTTCTGGTGCAAATTATGGGTATGTACTCTGAAGGATCCATGCATTCCGCAGTTCTTTTATAAACGTGTGTGTGATTATATTGTAGGGGATAATAGCATCTTGTTTAATTTTCTTAAAATTTTAATTAATTTTGTATTTAATCTTTGTAGTTTTCGTAAGTATACTTATTTGTGAATCTCTCATGTAGTTTATGATTTGTAATTTGGTTACTCCTTTTCTGAGTTTACCAGGTACGTTTAAGCTGACCCTTCAGTTTACTGAGGATTATCCAAACAAGCCACCGACAGTCCGCTTTGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACATTCTCAAGGAATATGCCTTTTGTAAACATTTAATACTTTATGTGATTCATTCTTGGTCAATTTGAGGGCTTTTTGTAATCTCCGAGGATGCCTAGTTCTCCCGTACGTTCTTGGTCCTACTACTTCTTGTCAACACAATGTTGCTTATTGTGTATGTTTTTATGTTGTGCTGAGCTAATTTTCTTTTGCTAGCAAATGAAAAAAGAAAAAAACATCTGCCAACACTAGTGTGTGCTCTTTTATGAGCTGTATGTGCTATGTTTGATATGTGTATGGTATGCTTGGCATGGGCATGGGTATTTTAATGAGTGAAAAGCAAGAGAATGAGTACAAATATCTGTAAAATGAGGAAGTACGTGCTCATCTTAGGTTGCTATGTAAGTTGTGACAATTTTGTTTTTTAATTTTTTCCGTAATGTTGCTAAGCCTTCACTTTTTGTGCTCATTTGCCTTTTCCCATCGCCTTCAGTTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATCCAGGTACCACATAATCAATTTGGCCTTAGTGCATGTGAAGGCTGAAAATTTTTCTTCCTGTATGATTATCAATAGCCTCTTTTTATTATTTTTTTGGGTACAAACGAAAAGCATGTAATCATAGTCACTGAAAGAAACCTGGTAGTGCTTTTCTGTACTATGCCCTACGTAAGAAGTAGAATGCATATGGTTCACGTGTCCTCAGGATTCTTAAAGTATCATATTTATGGAACTGGCTGTGTTAGCAAGCAGTTAGTAATGAATCTGCCCTCCCAACTGATCCATGTCATAAATGCCCCATTCTTTTAGTTTTTGTTCTTGATTCCAGAATTCGTGATAAATTACAGGTTTGATTCACTCACTCTTTGTGTGTGTGTGTCTCTCTTTTTTTGTCCCCTAATAAATTACTAGGAAGTTAAAAGGACTGGACGAATGTTAACTTGACTGATAATCTAATTGGAATTTCACCTACTAAGGAAATTGCAGACGTTATCGTTAATCTATATTTTTATTTTAGTCATGCATATTCATAATGTTCAGCACAAGTATTACTGCCCACCAAGAAAAGGGAAGAAATTAAGGGAAGCGTGGAGACGAAATATCTGACGAGTGACGATTATACGCCGTGTTATGGAGAGTGTAAAAATATTGACAAAATTAGACAAATGACCTTTAGGATTCAAAATGTTAAATGGCTCCCTCATGCTTTTCCTTGGTTTTCAAACCCACTTTTCTTTTCATCTGTTTCTAATACCGTTCCTGTTTTCAATTGCAGTCGTTACTGTGCGACCCCAATCCAAACTCTCCTGCTAACTCTGAAGCTGCTAGGATGTTCAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATCGTGGAACAGAGTTGGACTGCTGAT

mRNA sequence

CAGCCGGTGAGGATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGATTTCAAGAGGTTGCAACAAGATCCGCCTGCCGGCATCAGTGGTGCTCCTCAAGACAATAATATCATGCTATGGAATGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTTACTGAGGATTATCCAAACAAGCCACCGACAGTCCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATCCAGTCGTTACTGTGCGACCCCAATCCAAACTCTCCTGCTAACTCTGAAGCTGCTAGGATGTTCAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATCGTGGAACAGAGTTGGACTGCTGAT

Coding sequence (CDS)

CAGCCGGTGAGGATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGATTTCAAGAGGTTGCAACAAGATCCGCCTGCCGGCATCAGTGGTGCTCCTCAAGACAATAATATCATGCTATGGAATGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTTACTGAGGATTATCCAAACAAGCCACCGACAGTCCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATCCAGTCGTTACTGTGCGACCCCAATCCAAACTCTCCTGCTAACTCTGAAGCTGCTAGGATGTTCAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATCGTGGAACAGAGTTGGACTGCTGAT

Protein sequence

QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD

Homology

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BLAST of MS015150 vs. NCBI nr
Match: KAA0034394.1 (ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-conjugating enzyme [Cucumis melo var. makuwa])

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61
           PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61

Query: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121

Query: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 156

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BLAST of MS015150 vs. NCBI nr
Match: CBI32005.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 324.7 bits (831), Expect = 4.3e-85
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           Q VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 36  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 95

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 96  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 155

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 156 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

[Close]

BLAST of MS015150 vs. NCBI nr
Match: PQQ08691.1 (hypothetical protein Pyn_14578 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 324.7 bits (831), Expect = 4.3e-85
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           Q VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 66  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 125

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 126 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 185

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 186 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 221

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BLAST of MS015150 vs. NCBI nr
Match: KAG7032198.1 (Ubiquitin-conjugating enzyme E2 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 7.4e-85
Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           +PVRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 3   RPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 62

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 63  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 122

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 123 NPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 158

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BLAST of MS015150 vs. NCBI nr
Match: KAF3966055.1 (hypothetical protein CMV_009812 [Castanea mollissima])

HSP 1 Score: 323.6 bits (828), Expect = 9.7e-85
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 3   VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 62
           VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 36  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 95

Query: 63  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 122
           FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 96  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 155

Query: 123 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 156 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 189

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BLAST of MS015150 vs. ExPASy Swiss-Prot
Match: P42745 (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.9e-85
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

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BLAST of MS015150 vs. ExPASy Swiss-Prot
Match: P35130 (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.9e-85
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARMFSENKREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. ExPASy Swiss-Prot
Match: P25866 (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-84
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARM+SENKREYNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. ExPASy Swiss-Prot
Match: P25865 (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-84
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. ExPASy Swiss-Prot
Match: P42746 (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSW 154
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

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BLAST of MS015150 vs. ExPASy TrEMBL
Match: A0A5A7ST60 (Ubiquitin-conjugating enzyme OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00190 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.2e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61
           PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61

Query: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121

Query: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 156

[Close]

BLAST of MS015150 vs. ExPASy TrEMBL
Match: A0A0A0KQJ6 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604380 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.2e-86
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           +PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 72  RPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 131

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 132 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 191

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 192 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

[Close]

BLAST of MS015150 vs. ExPASy TrEMBL
Match: A0A314YV04 (UBC core domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14578 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.1e-85
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           Q VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 66  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 125

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 126 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 185

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 186 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 221

[Close]

BLAST of MS015150 vs. ExPASy TrEMBL
Match: D7TND2 (UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g01770 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.1e-85
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   QPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 60
           Q VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 36  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 95

Query: 61  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 120
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 96  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 155

Query: 121 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 156 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

[Close]

BLAST of MS015150 vs. ExPASy TrEMBL
Match: A0A444ZV67 (UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g062607 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.7e-85
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 3   VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 62
           VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 42  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 101

Query: 63  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 122
           FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 102 FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 161

Query: 123 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           NSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 162 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 195

[Close]

BLAST of MS015150 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 314.7 bits (805), Expect = 4.2e-86
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.1e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.1e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 157
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of MS015150 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 283.9 bits (725), Expect = 7.9e-77
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 125 PANSEAARMFSENKREYNRRVREIVEQSW 154
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of MS015150 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 9   ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 68
           A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 69  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 128
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 129 EAARMFSENKREYNRRVREIVEQSWT 155
           E A M+  +K +Y     E   ++WT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARTWT 142

The following BLAST results are available for this feature:

BLAST of MS015150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034394.1	1.5e-85	100.00	ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-co...	[more]
CBI32005.3	4.3e-85	99.36	unnamed protein product, partial [Vitis vinifera]	[more]
PQQ08691.1	4.3e-85	99.36	hypothetical protein Pyn_14578 [Prunus yedoensis var. nudiflora]	[more]
KAG7032198.1	7.4e-85	98.08	Ubiquitin-conjugating enzyme E2 2, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAF3966055.1	9.7e-85	100.00	hypothetical protein CMV_009812 [Castanea mollissima]	[more]

BLAST of MS015150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42745	5.9e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 S...	[more]
P35130	5.9e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1	[more]
P25866	1.7e-84	96.71	Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1	[more]
P25865	2.9e-84	96.05	Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 S...	[more]
P42746	1.1e-75	88.59	Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 S...	[more]

BLAST of MS015150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST60	7.2e-86	100.00	Ubiquitin-conjugating enzyme OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KQJ6	7.2e-86	99.36	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604380 PE...	[more]
A0A314YV04	2.1e-85	99.36	UBC core domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558...	[more]
D7TND2	2.1e-85	99.36	UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g017...	[more]
A0A444ZV67	4.7e-85	100.00	UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g062607...	[more]

BLAST of MS015150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02760.1	4.2e-86	97.37	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	2.1e-85	96.05	ubiquitin carrier protein 1	[more]
AT1G14400.2	2.1e-85	96.05	ubiquitin carrier protein 1	[more]
AT5G62540.1	7.9e-77	88.59	ubiquitin-conjugating enzyme 3	[more]
AT4G27960.1	4.4e-35	45.89	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 11..154 e-value: 5.4E-69 score: 245.2
None	No IPR available	PANTHER	PTHR24067:SF319	UBIQUITIN-CONJUGATING ENZYME E2 2	coord: 3..156
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..156
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 12..148 e-value: 9.4E-53 score: 177.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 8..154 score: 60.566891
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 11..149 e-value: 7.0712E-75 score: 218.226
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 3..152 e-value: 4.6E-68 score: 229.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 3..154
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 81..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015150.1	MS015150.1	mRNA