MS014674 (gene) Bitter gourd (TR) v1

Overview


Name	MS014674
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of Unknown Function (DUF239)
Location	scaffold1315: 139078 .. 139305 (+)
RNA-Seq Expression	MS014674
Synteny	MS014674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCACAATCAAGGAATTGGTTCCTTGAAGTGAGTGAGAAAGTAAATAAAACAATAGGATATTGGCCAAACGAGTTGTTTCCACATCTAACGAATGGGGCAGATCAAGTGGCATGGGGAGGCATCGCAAAGCCTTCACCAACAGGAGTGAGCCCTCCATTGGGAAACGGCCACATGCCAAATGGTAAAATCGACGAAGCTTCATACTTCAGAAACATAAAATTTATA

mRNA sequence

GATCCACAATCAAGGAATTGGTTCCTTGAAGTGAGTGAGAAAGTAAATAAAACAATAGGATATTGGCCAAACGAGTTGTTTCCACATCTAACGAATGGGGCAGATCAAGTGGCATGGGGAGGCATCGCAAAGCCTTCACCAACAGGAGTGAGCCCTCCATTGGGAAACGGCCACATGCCAAATGGTAAAATCGACGAAGCTTCATACTTCAGAAACATAAAATTTATA

Coding sequence (CDS)

GATCCACAATCAAGGAATTGGTTCCTTGAAGTGAGTGAGAAAGTAAATAAAACAATAGGATATTGGCCAAACGAGTTGTTTCCACATCTAACGAATGGGGCAGATCAAGTGGCATGGGGAGGCATCGCAAAGCCTTCACCAACAGGAGTGAGCCCTCCATTGGGAAACGGCCACATGCCAAATGGTAAAATCGACGAAGCTTCATACTTCAGAAACATAAAATTTATA

Protein sequence

DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMPNGKIDEASYFRNIKFI

Homology

[Close]

BLAST of MS014674 vs. NCBI nr
Match: XP_022145286.1 (uncharacterized protein LOC111014774 [Momordica charantia])

HSP 1 Score: 108.2 bits (269), Expect = 3.1e-20
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + +W+L VS+    TIGYWP ELF HL +GA+QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 169 DRSTGDWWLAVSDS-QTTIGYWPKELFGHLNDGAEQVAWGGIAKPSPNGMSPPLGNGHKP 228

Query: 61  -NGKIDEASYFRNIKFI 77
            NGK +EA YF++I +I
Sbjct: 229 NNGKYNEACYFKSINYI 244

[Close]

BLAST of MS014674 vs. NCBI nr
Match: XP_022145287.1 (uncharacterized protein LOC111014775 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-20
Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + +W+L VS+    TIGYWP ELF HL +GA+QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 204 DRPTGDWWLAVSDS-QTTIGYWPKELFGHLNDGAEQVAWGGIAKPSPNGMSPPLGNGHKP 263

Query: 61  N-GKIDEASYFRNIKFI 77
           N GK D+A YFR + +I
Sbjct: 264 NYGKHDDACYFRTLNYI 279

[Close]

BLAST of MS014674 vs. NCBI nr
Match: XP_022145288.1 (uncharacterized protein LOC111014777 [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + NW+L V E  +KTIGYWP ELF HL +G +QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 229 DRPTGNWWLAVGES-HKTIGYWPKELFGHLNDGTEQVAWGGIAKPSPNGMSPPLGNGHKP 288

Query: 61  N-GKIDEASYFRNIKFI 77
           N  K D+A YFR + ++
Sbjct: 289 NYSKYDDACYFRYMNYV 304

[Close]

BLAST of MS014674 vs. NCBI nr
Match: TXG53659.1 (hypothetical protein EZV62_018915 [Acer yangbiense])

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           DP S+NW L V E  +  +GYWP EL PHL NGA  V WGG+AK    G SPP+G+GH P
Sbjct: 132 DPNSQNWVLTVFED-DIVVGYWPKELVPHLLNGAGYVGWGGLAKEGKDGTSPPMGSGHKP 191

Query: 61  NGKIDEASYFRNIK 75
           +G  + A+YF++I+
Sbjct: 192 DGNFNIATYFKHIR 204

[Close]

BLAST of MS014674 vs. NCBI nr
Match: XP_031738649.1 (uncharacterized protein LOC116402744 [Cucumis sativus] >KAE8650030.1 hypothetical protein Csa_009857 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 3.0e-15
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 6   NWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTG-VSPPLGNGHMPNGKI 65
           +W++ V +     +GYWPNELFP+L  GADQVAWGG A+P+  G  SPPLG+GH PNGK 
Sbjct: 298 HWWVRVGDN-QVGLGYWPNELFPNLLRGADQVAWGGSAQPTLYGDESPPLGSGHKPNGKP 357

Query: 66  DEASYFRNIKFI 77
           DEA + RNI++I
Sbjct: 358 DEAIFVRNIQYI 368

[Close]

BLAST of MS014674 vs. ExPASy TrEMBL
Match: A0A6J1CVW9 (uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014774 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + +W+L VS+    TIGYWP ELF HL +GA+QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 169 DRSTGDWWLAVSDS-QTTIGYWPKELFGHLNDGAEQVAWGGIAKPSPNGMSPPLGNGHKP 228

Query: 61  -NGKIDEASYFRNIKFI 77
            NGK +EA YF++I +I
Sbjct: 229 NNGKYNEACYFKSINYI 244

[Close]

BLAST of MS014674 vs. ExPASy TrEMBL
Match: A0A6J1CW60 (uncharacterized protein LOC111014775 OS=Momordica charantia OX=3673 GN=LOC111014775 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20
Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + +W+L VS+    TIGYWP ELF HL +GA+QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 204 DRPTGDWWLAVSDS-QTTIGYWPKELFGHLNDGAEQVAWGGIAKPSPNGMSPPLGNGHKP 263

Query: 61  N-GKIDEASYFRNIKFI 77
           N GK D+A YFR + +I
Sbjct: 264 NYGKHDDACYFRTLNYI 279

[Close]

BLAST of MS014674 vs. ExPASy TrEMBL
Match: A0A6J1CVJ6 (uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014777 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  + NW+L V E  +KTIGYWP ELF HL +G +QVAWGGIAKPSP G+SPPLGNGH P
Sbjct: 229 DRPTGNWWLAVGES-HKTIGYWPKELFGHLNDGTEQVAWGGIAKPSPNGMSPPLGNGHKP 288

Query: 61  N-GKIDEASYFRNIKFI 77
           N  K D+A YFR + ++
Sbjct: 289 NYSKYDDACYFRYMNYV 304

[Close]

BLAST of MS014674 vs. ExPASy TrEMBL
Match: A0A5C7HA57 (Neprosin domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018915 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-16
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           DP S+NW L V E  +  +GYWP EL PHL NGA  V WGG+AK    G SPP+G+GH P
Sbjct: 132 DPNSQNWVLTVFED-DIVVGYWPKELVPHLLNGAGYVGWGGLAKEGKDGTSPPMGSGHKP 191

Query: 61  NGKIDEASYFRNIK 75
           +G  + A+YF++I+
Sbjct: 192 DGNFNIATYFKHIR 204

[Close]

BLAST of MS014674 vs. ExPASy TrEMBL
Match: A0A0A0L400 (Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011710 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 6   NWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTG-VSPPLGNGHMPNGKI 65
           +W++ V +     +GYWPNELFP+L  GADQVAWGG A+P+  G  SPPLG+GH PNGK 
Sbjct: 150 HWWVRVGDN-QVGLGYWPNELFPNLLRGADQVAWGGSAQPTLYGDESPPLGSGHKPNGKP 209

Query: 66  DEASYFRNIKFI 77
           DEA + RNI++I
Sbjct: 210 DEAIFVRNIQYI 220

[Close]

BLAST of MS014674 vs. TAIR 10
Match: AT2G27320.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 77.4 bits (189), Expect = 5.5e-15
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  S NW L + ++V   +GYWP ELF HL  GA  V +GG   PSP G SPP+GNG+ P
Sbjct: 226 DGFSGNWILRIFDRV---VGYWPKELFTHLNKGASLVRFGGNTFPSPDGFSPPMGNGYFP 285

Query: 61  NGKIDEASYFRNIK 75
           +    ++S+F  +K
Sbjct: 286 SHDFYKSSHFSKVK 296

[Close]

BLAST of MS014674 vs. TAIR 10
Match: AT2G35250.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-14
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  S NW L++ ++V   IGYWP ELF HL NGA  V +GG    SP G+SPP+GNG  P
Sbjct: 220 DGFSGNWALKMFDEV---IGYWPKELFSHLNNGASLVRYGGNTFESPDGISPPMGNGFFP 279

Query: 61  NGKIDEASYFRNIKFI 77
                + ++F N+  I
Sbjct: 280 VADFKKTAHFNNVVVI 292

[Close]

BLAST of MS014674 vs. TAIR 10
Match: AT2G38255.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 71.6 bits (174), Expect = 3.0e-13
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D  S NW L+    +N+ +GYWP +LF HL  GA  V +GG    SP G+SPP+GNGH P
Sbjct: 209 DGFSGNWVLK-DTVMNEIVGYWPKKLFTHLNKGASLVRFGGNTFTSPDGISPPMGNGHFP 268

Query: 61  NGKIDEASYFRNIK 75
                ++S++ ++K
Sbjct: 269 VISYFKSSHYVHVK 281

[Close]

BLAST of MS014674 vs. TAIR 10
Match: AT5G25410.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-12
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 1   DPQSRNWFLE--VSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGH 60
           D Q+ NW++   ++   N  +GYWP ELF  + NGA+ V  GG  + S  G SPP+GNG 
Sbjct: 242 DKQTGNWWITKLIANAPNIDVGYWPKELFNLIGNGANMVGVGGAVQASHQGPSPPMGNGK 301

Query: 61  MPNGKIDEASYFRNIKFI 77
            P G   E++ F NI+ +
Sbjct: 302 FPIGDPKESAMFTNIEVL 319

[Close]

BLAST of MS014674 vs. TAIR 10
Match: AT5G60380.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-12
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1   DPQSRNWFLEVSEKVNKTIGYWPNELFPHLTNGADQVAWGGIAKPSPTGVSPPLGNGHMP 60
           D Q+RNW++ +       IGYWP ELF  + NGA  V  GG+ + SP+G+SPP+GNG  P
Sbjct: 244 DEQTRNWWI-IQMSPYTYIGYWPKELFYLMDNGATMVGVGGVVQASPSGLSPPMGNGKFP 303

Query: 61  NGKIDEASYFRNI 74
                 ++ F N+
Sbjct: 304 AKGPLRSAMFSNV 315

The following BLAST results are available for this feature:

BLAST of MS014674 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145286.1	3.1e-20	63.64	uncharacterized protein LOC111014774 [Momordica charantia]	[more]
XP_022145287.1	4.1e-20	63.64	uncharacterized protein LOC111014775 [Momordica charantia]	[more]
XP_022145288.1	5.3e-20	62.34	uncharacterized protein LOC111014777 [Momordica charantia]	[more]
TXG53659.1	1.4e-15	52.70	hypothetical protein EZV62_018915 [Acer yangbiense]	[more]
XP_031738649.1	3.0e-15	58.33	uncharacterized protein LOC116402744 [Cucumis sativus] >KAE8650030.1 hypothetica...	[more]

BLAST of MS014674 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS014674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVW9	1.5e-20	63.64	uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1CW60	2.0e-20	63.64	uncharacterized protein LOC111014775 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1CVJ6	2.6e-20	62.34	uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5C7HA57	6.5e-16	52.70	Neprosin domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018915...	[more]
A0A0A0L400	1.5e-15	58.33	Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011710 PE...	[more]

BLAST of MS014674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27320.1	5.5e-15	45.95	Protein of Unknown Function (DUF239)	[more]
AT2G35250.1	1.6e-14	46.05	Protein of Unknown Function (DUF239)	[more]
AT2G38255.1	3.0e-13	43.24	Protein of Unknown Function (DUF239)	[more]
AT5G25410.1	1.1e-12	41.03	Protein of Unknown Function (DUF239)	[more]
AT5G60380.1	2.5e-12	42.47	Protein of Unknown Function (DUF239)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004314	Neprosin	PFAM	PF03080	Neprosin	coord: 1..75 e-value: 9.0E-21 score: 74.2
None	No IPR available	PANTHER	PTHR31589	PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED	coord: 1..75
None	No IPR available	PANTHER	PTHR31589:SF163	CARBOXYL-TERMINAL PROTEINASE-LIKE PROTEIN (DUF239)-RELATED	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014674.1	MS014674.1	mRNA