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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. AACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTCGGCGCTGACTCTGTGTGCCAACAACAGCAACTGCACTGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACCCTCGTCATCGCTGCCTCGATGCGGTGCGATAGCCGCACCGAAGAATGCCTCGCCCAAGAAGACAACGAGTCGGCATTTCCGAGCTTGGTAAAGTCGATTAAGTTTGATAGTCCAAGAACCGGAAACCAGAAGAAACCTATATGTTTTCGGCAGGGAAGGTATAGATGCCTCGACGAGGGACACCCAATTCCCAACCCAGAAACTTGTGCTCATTATAAGCGCAACTTCTGTCAT mRNA sequence AACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTCGGCGCTGACTCTGTGTGCCAACAACAGCAACTGCACTGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACCCTCGTCATCGCTGCCTCGATGCGGTGCGATAGCCGCACCGAAGAATGCCTCGCCCAAGAAGACAACGAGTCGGCATTTCCGAGCTTGGTAAAGTCGATTAAGTTTGATAGTCCAAGAACCGGAAACCAGAAGAAACCTATATGTTTTCGGCAGGGAAGGTATAGATGCCTCGACGAGGGACACCCAATTCCCAACCCAGAAACTTGTGCTCATTATAAGCGCAACTTCTGTCAT Coding sequence (CDS) AACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTCGGCGCTGACTCTGTGTGCCAACAACAGCAACTGCACTGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACCCTCGTCATCGCTGCCTCGATGCGGTGCGATAGCCGCACCGAAGAATGCCTCGCCCAAGAAGACAACGAGTCGGCATTTCCGAGCTTGGTAAAGTCGATTAAGTTTGATAGTCCAAGAACCGGAAACCAGAAGAAACCTATATGTTTTCGGCAGGGAAGGTATAGATGCCTCGACGAGGGACACCCAATTCCCAACCCAGAAACTTGTGCTCATTATAAGCGCAACTTCTGTCAT Protein sequence NSTTGVAMALLISALTLCANNSNCTAAPLSPSNFDNDTLVIAASMRCDSRTEECLAQEDNESAFPSLVKSIKFDSPRTGNQKKPICFRQGRYRCLDEGHPIPNPETCAHYKRNFCH
Homology
BLAST of MS014581 vs. NCBI nr
Match: KAG6607071.1 (hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 1 NSTTGVAMALLISALTLCANNSNCTAAPLSPSNFDNDTLVIAASMRCDSRTEECLAQE-D 60
+++ GV A + L + S+C A +PS++ N+T+ AASM CD R EEC+ +E D
Sbjct: 5 SNSGGVMAAAAMGVFILVLSGSDCNVASPTPSSYGNNTVAAAASMWCDGRVEECVTREGD 64
Query: 61 NESAFPSLVKSI-KFDSPRTGNQKKPICFRQGRYR-CLDEGHPIPNPETCAHYKR 113
+ SAFPSL S K+ SP + N K +C R YR C + PNP C Y R
Sbjct: 65 SASAFPSLQTSTRKYISPSSVNSNKAVCERPDEYRSCFNPRRSNPNPNNCGRYTR 119
BLAST of MS014581 vs. NCBI nr
Match: KAG6607070.1 (hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.3 bits (181), Expect = 7.6e-10 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 0
Query: 1 NSTTGVAMALLISA----LTLCANNSNCTAAPLSPSNFDNDTLVIAASMRCDSRTEECLA 60
+S +G MA +A L + S+C+ A +PS++ N T+ AASM CD R EEC+
Sbjct: 4 SSNSGAVMAAAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVT 63
Query: 61 QEDN-ESAFPSLVKSI-KFDSPRTGNQKKPICFRQGRYR-CLDEGHPIPNPETCAHYKR 113
+ED+ ESAFPSL+ S KF S T N+ KP+C R G Y+ C + + C Y R
Sbjct: 64 REDDGESAFPSLLASTPKFISFPTRNRNKPVCERPGDYKSCFNARRTNTKNDNCGTYGR 122
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG6607071.1 | 1.4e-11 | 40.00 | hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6607070.1 | 7.6e-10 | 40.34 | hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS014581.1 | MS014581.1 | mRNA |
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