MS014487 (gene) Bitter gourd (TR) v1

Overview


Name	MS014487
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cyt s in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Location	scaffold553: 310346 .. 311182 (-)
RNA-Seq Expression	MS014487
Synteny	MS014487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTATTACACGAGGGACGATGAGGCTGTCGACGACTTCGACGAGTACGATCCGACGCCCTACGGCGGCGGATTCGACCTGTTTCTGACGTACGGCCGCCCGATCTCGCCGTGCGACGAGACCTGCTACCCGCACTCCGCCGGCAACGACGACGATTTCGATTACGAGCGCCCGCAGTTCGAATCCTACGCCGAGCCCTCCGCCTACGGGGACGAGGCCCTCCAGGCCGAGTACAGCAGCTACTCACGCCCCAATCGCCGCCCTGGAATTCAGATCGGAGGCGGGGCCTACGGGGCCAAGCCCCAACCGGCTTACGGCGGATCGGAGTACGGGAGGAGGCCGGAGGGCTACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGACGGAGTCTTATGGATCTGAGGAATACGGATCCGGGTACGGGAGGAAACCGGAGGGATACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGGGGGATTCTTACGGATCGGGTGGGTATCGGCGGCAGTCAGAGTATGAATCGCAGGAGGGAGGGGAGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGGGGAGTGGGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGAGCTATGGAAGGGAAGAATATGAGAGGCCCAGCTACGGAGATGACCCACCCAGAAGGCCGAGCTACGGCCGGTCTGAAGAGGAGGATTACCATAGGCCGAGCTATGGCCGGTCCGAGGAGGAGGATTACCGGAAGCCAAACTACGAGCGGCGGGACGATGATGATGAGCGCCGATATGGCTACGGTGGGGAAGAGGGCTATGGCCGGAAGAAATAT

mRNA sequence

ATGCCGTATTACACGAGGGACGATGAGGCTGTCGACGACTTCGACGAGTACGATCCGACGCCCTACGGCGGCGGATTCGACCTGTTTCTGACGTACGGCCGCCCGATCTCGCCGTGCGACGAGACCTGCTACCCGCACTCCGCCGGCAACGACGACGATTTCGATTACGAGCGCCCGCAGTTCGAATCCTACGCCGAGCCCTCCGCCTACGGGGACGAGGCCCTCCAGGCCGAGTACAGCAGCTACTCACGCCCCAATCGCCGCCCTGGAATTCAGATCGGAGGCGGGGCCTACGGGGCCAAGCCCCAACCGGCTTACGGCGGATCGGAGTACGGGAGGAGGCCGGAGGGCTACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGACGGAGTCTTATGGATCTGAGGAATACGGATCCGGGTACGGGAGGAAACCGGAGGGATACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGGGGGATTCTTACGGATCGGGTGGGTATCGGCGGCAGTCAGAGTATGAATCGCAGGAGGGAGGGGAGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGGGGAGTGGGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGAGCTATGGAAGGGAAGAATATGAGAGGCCCAGCTACGGAGATGACCCACCCAGAAGGCCGAGCTACGGCCGGTCTGAAGAGGAGGATTACCATAGGCCGAGCTATGGCCGGTCCGAGGAGGAGGATTACCGGAAGCCAAACTACGAGCGGCGGGACGATGATGATGAGCGCCGATATGGCTACGGTGGGGAAGAGGGCTATGGCCGGAAGAAATAT

Coding sequence (CDS)

ATGCCGTATTACACGAGGGACGATGAGGCTGTCGACGACTTCGACGAGTACGATCCGACGCCCTACGGCGGCGGATTCGACCTGTTTCTGACGTACGGCCGCCCGATCTCGCCGTGCGACGAGACCTGCTACCCGCACTCCGCCGGCAACGACGACGATTTCGATTACGAGCGCCCGCAGTTCGAATCCTACGCCGAGCCCTCCGCCTACGGGGACGAGGCCCTCCAGGCCGAGTACAGCAGCTACTCACGCCCCAATCGCCGCCCTGGAATTCAGATCGGAGGCGGGGCCTACGGGGCCAAGCCCCAACCGGCTTACGGCGGATCGGAGTACGGGAGGAGGCCGGAGGGCTACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGACGGAGTCTTATGGATCTGAGGAATACGGATCCGGGTACGGGAGGAAACCGGAGGGATACGGGGAGGAACAGGGGTACGGCCGGAGGCCGGAGGGGGATTCTTACGGATCGGGTGGGTATCGGCGGCAGTCAGAGTATGAATCGCAGGAGGGAGGGGAGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGGGGAGTGGGTATGGGCGGAAACAGAGCTATGGGGAAGAACAGAGCTATGGAAGGGAAGAATATGAGAGGCCCAGCTACGGAGATGACCCACCCAGAAGGCCGAGCTACGGCCGGTCTGAAGAGGAGGATTACCATAGGCCGAGCTATGGCCGGTCCGAGGAGGAGGATTACCGGAAGCCAAACTACGAGCGGCGGGACGATGATGATGAGCGCCGATATGGCTACGGTGGGGAAGAGGGCTATGGCCGGAAGAAATAT

Protein sequence

MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQFESYAEPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYGRRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQGSGYGRKQSYGEEQSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY

Homology

[Close]

BLAST of MS014487 vs. NCBI nr
Match: XP_022144440.1 (uncharacterized protein At5g39570-like, partial [Momordica charantia])

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-106
Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 66  EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG 125
           EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG
Sbjct: 1   EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG 60

Query: 126 RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR 185
           RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR
Sbjct: 61  RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR 120

Query: 186 KQSYGEEQGSGYGRKQSYGEEQSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS 245
           KQSYGEEQGSGYGRK      QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS
Sbjct: 121 KQSYGEEQGSGYGRK------QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS 180

Query: 246 EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY 280
           EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY
Sbjct: 181 EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY 208

[Close]

BLAST of MS014487 vs. NCBI nr
Match: XP_004136693.1 (uncharacterized protein At5g39570 [Cucumis sativus] >KGN59544.1 hypothetical protein Csa_001323 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 1.3e-84
Identity = 201/313 (64.22%), Postives = 222/313 (70.93%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYY+RDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDDD DYERPQ
Sbjct: 1   MPYYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDDIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRP-GIQIGGGAYG-AKPQPAYG----GSEYG-- 120
           FESYAEPSAYGD+ALQAEYSSYSRP     G   G   YG ++PQPAYG    GSEYG  
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPSGSEYGSE 120

Query: 121 --RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----GYGRRP 180
             RR   YGE++    GYGR+ E+ESYGS EYGS GY RK   E YG ++    GYG R 
Sbjct: 121 GYRRKPEYGEQEYGSGGYGRKQESESYGSGEYGSGGYRRKQESESYGSQEYGSGGYGGRQ 180

Query: 181 EGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGEE---- 240
           E DSYGSGGY  + E +S   G YGR+Q  GE +G          G GRKQ YGEE    
Sbjct: 181 ESDSYGSGGYGGRKESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQKYGEEGYEG 240

Query: 241 QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDDDERRY 280
             Y REEY+RPSYGD+P               RPSYGRSEEEDYRKP+YERRD+D+ERRY
Sbjct: 241 SGYKREEYDRPSYGDEP--------------RRPSYGRSEEEDYRKPSYERRDEDEERRY 298

[Close]

BLAST of MS014487 vs. NCBI nr
Match: XP_008443383.1 (PREDICTED: uncharacterized protein At5g39570 [Cucumis melo] >TYK25620.1 uncharacterized protein E5676_scaffold352G007800 [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-80
Identity = 198/318 (62.26%), Postives = 216/318 (67.92%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDD+ DYERPQ
Sbjct: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDNIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRR----PGIQIG---GGAYGAKPQPAYG----GS 120
           FESYAEPSAYGD+ALQAEYSSYSRP       P  + G   GG   ++PQPAYG    GS
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSGGYESSRPQPAYGFQPSGS 120

Query: 121 EYG----RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----G 180
           EYG    RR   YGE++    GYGR+ ETESYGS EYGS GY RK   E YG E+    G
Sbjct: 121 EYGSEGYRRKPEYGEQEYGSGGYGRKQETESYGSGEYGSGGYRRKQESESYGSEEYVSGG 180

Query: 181 YGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGE 240
           YG R E DSYGSGGY R+ E +S   G YGR+Q  GE +G          G GRKQ YGE
Sbjct: 181 YGGRQESDSYGSGGYGRRQESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQRYGE 240

Query: 241 E----QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDD 280
           E      Y REEYERPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D
Sbjct: 241 EGYEGSGYRREEYERPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDED 295

[Close]

BLAST of MS014487 vs. NCBI nr
Match: KAA0053783.1 (uncharacterized protein E6C27_scaffold135G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-80
Identity = 198/318 (62.26%), Postives = 216/318 (67.92%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDD+ DYERPQ
Sbjct: 209 MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDNIDYERPQ 268

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRR----PGIQIG---GGAYGAKPQPAYG----GS 120
           FESYAEPSAYGD+ALQAEYSSYSRP       P  + G   GG   ++PQPAYG    GS
Sbjct: 269 FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSGGYESSRPQPAYGFQPSGS 328

Query: 121 EYG----RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----G 180
           EYG    RR   YGE++    GYGR+ ETESYGS EYGS GY RK   E YG E+    G
Sbjct: 329 EYGSEGYRRKPEYGEQEYGSGGYGRKQETESYGSGEYGSGGYRRKQESESYGSEEYVSGG 388

Query: 181 YGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGE 240
           YG R E DSYGSGGY R+ E +S   G YGR+Q  GE +G          G GRKQ YGE
Sbjct: 389 YGGRQESDSYGSGGYGRRQESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQRYGE 448

Query: 241 E----QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDD 280
           E      Y REEYERPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D
Sbjct: 449 EGYEGSGYRREEYERPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDED 503

[Close]

BLAST of MS014487 vs. NCBI nr
Match: XP_038905403.1 (uncharacterized protein At5g39570 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 2.2e-79
Identity = 191/304 (62.83%), Postives = 210/304 (69.08%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+ P +ETCYPHSAGNDDD DYERPQ
Sbjct: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLPPSEETCYPHSAGNDDDIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYG----GSEYG---- 120
           FESYAEPSAYGD+ALQAEYSSYSRP  +P     GG   A+PQPAYG     SEYG    
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRP--KPHSYGSGGYESARPQPAYGFQPSASEYGSEGY 120

Query: 121 RRPEGYGEEQ----GYGRRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGG 180
           RR   Y E++    GY R+ E+ESYGS  YG   GR+        GYG R E DSYGSGG
Sbjct: 121 RRKPEYEEQEYGSGGYRRKQESESYGSGGYG---GRQESDSYGSGGYGGRQESDSYGSGG 180

Query: 181 YRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGEEQ----SYGREEYE 240
           Y  + E +S   G YGR+Q  GE  G          G GRKQ YGEE+     Y REEY 
Sbjct: 181 YGGRQESDSYGSGGYGRRQEEGESGGYRRQSESEEYGSGRKQRYGEEEYESSGYRREEYG 240

Query: 241 RPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDDDERRYGYGGEEGYG 280
           RPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D+ER+YGY GEEGYG
Sbjct: 241 RPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDEDEERQYGY-GEEGYG 285

[Close]

BLAST of MS014487 vs. ExPASy Swiss-Prot
Match: Q9FKA5 (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.8e-58
Identity = 188/355 (52.96%), Postives = 213/355 (60.00%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDD  VDDFDE+DPTPY GG+D+ + YGRPI P DETCYP S+G DDDF+YERP+
Sbjct: 1   MPYYTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRPGIQ--IGGGAY--GAKPQPAYGG-SEYGRRP 120
           F    EPSAYGDEAL  EYSSYSRP  RP  +   GGG +  G +P P YG  S YGR+P
Sbjct: 61  FTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKP 120

Query: 121 E-----GYG--EEQGYGRRPETESYGS---------EEYGSG--------YGRKPEGYGE 180
           E     GYG   E  YGRRPE +SYGS          EYGSG        YGR+PE  G 
Sbjct: 121 ESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPES-GL 180

Query: 181 EQGYGRRPEGD-----SYGSG-----GYRRQSEYESQEGGEYGRKQSYG--EEQGSGYGR 240
             GYG R E +     SYG       GYR+ S   S+E  E  RK SYG  EEQ  GY R
Sbjct: 181 GSGYGGRSESEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-R 240

Query: 241 KQSYG---EEQ-------SYGREE------YERPSYG--DDPPR---RPSYGRSEEED-- 280
           K SYG   EEQ       SYGR E      Y +PSYG  DD      +PSYGRSEE++  
Sbjct: 241 KPSYGRSEEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQEEG 300

[Close]

BLAST of MS014487 vs. ExPASy TrEMBL
Match: A0A6J1CRM1 (uncharacterized protein At5g39570-like OS=Momordica charantia OX=3673 GN=LOC111014123 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.8e-107
Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 66  EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG 125
           EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG
Sbjct: 1   EPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGEEQGYG 60

Query: 126 RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR 185
           RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR
Sbjct: 61  RRPETESYGSEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYESQEGGEYGR 120

Query: 186 KQSYGEEQGSGYGRKQSYGEEQSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS 245
           KQSYGEEQGSGYGRK      QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS
Sbjct: 121 KQSYGEEQGSGYGRK------QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRS 180

Query: 246 EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY 280
           EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY
Sbjct: 181 EEEDYRKPNYERRDDDDERRYGYGGEEGYGRKKY 208

[Close]

BLAST of MS014487 vs. ExPASy TrEMBL
Match: A0A0A0LF79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824890 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 6.4e-85
Identity = 201/313 (64.22%), Postives = 222/313 (70.93%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYY+RDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDDD DYERPQ
Sbjct: 1   MPYYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDDIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRP-GIQIGGGAYG-AKPQPAYG----GSEYG-- 120
           FESYAEPSAYGD+ALQAEYSSYSRP     G   G   YG ++PQPAYG    GSEYG  
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPSGSEYGSE 120

Query: 121 --RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----GYGRRP 180
             RR   YGE++    GYGR+ E+ESYGS EYGS GY RK   E YG ++    GYG R 
Sbjct: 121 GYRRKPEYGEQEYGSGGYGRKQESESYGSGEYGSGGYRRKQESESYGSQEYGSGGYGGRQ 180

Query: 181 EGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGEE---- 240
           E DSYGSGGY  + E +S   G YGR+Q  GE +G          G GRKQ YGEE    
Sbjct: 181 ESDSYGSGGYGGRKESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQKYGEEGYEG 240

Query: 241 QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDDDERRY 280
             Y REEY+RPSYGD+P               RPSYGRSEEEDYRKP+YERRD+D+ERRY
Sbjct: 241 SGYKREEYDRPSYGDEP--------------RRPSYGRSEEEDYRKPSYERRDEDEERRY 298

[Close]

BLAST of MS014487 vs. ExPASy TrEMBL
Match: A0A5D3DQS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007800 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.3e-81
Identity = 198/318 (62.26%), Postives = 216/318 (67.92%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDD+ DYERPQ
Sbjct: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDNIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRR----PGIQIG---GGAYGAKPQPAYG----GS 120
           FESYAEPSAYGD+ALQAEYSSYSRP       P  + G   GG   ++PQPAYG    GS
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSGGYESSRPQPAYGFQPSGS 120

Query: 121 EYG----RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----G 180
           EYG    RR   YGE++    GYGR+ ETESYGS EYGS GY RK   E YG E+    G
Sbjct: 121 EYGSEGYRRKPEYGEQEYGSGGYGRKQETESYGSGEYGSGGYRRKQESESYGSEEYVSGG 180

Query: 181 YGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGE 240
           YG R E DSYGSGGY R+ E +S   G YGR+Q  GE +G          G GRKQ YGE
Sbjct: 181 YGGRQESDSYGSGGYGRRQESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQRYGE 240

Query: 241 E----QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDD 280
           E      Y REEYERPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D
Sbjct: 241 EGYEGSGYRREEYERPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDED 295

[Close]

BLAST of MS014487 vs. ExPASy TrEMBL
Match: A0A5A7UCY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001680 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.3e-81
Identity = 198/318 (62.26%), Postives = 216/318 (67.92%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDD+ DYERPQ
Sbjct: 209 MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDNIDYERPQ 268

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRR----PGIQIG---GGAYGAKPQPAYG----GS 120
           FESYAEPSAYGD+ALQAEYSSYSRP       P  + G   GG   ++PQPAYG    GS
Sbjct: 269 FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSGGYESSRPQPAYGFQPSGS 328

Query: 121 EYG----RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----G 180
           EYG    RR   YGE++    GYGR+ ETESYGS EYGS GY RK   E YG E+    G
Sbjct: 329 EYGSEGYRRKPEYGEQEYGSGGYGRKQETESYGSGEYGSGGYRRKQESESYGSEEYVSGG 388

Query: 181 YGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGE 240
           YG R E DSYGSGGY R+ E +S   G YGR+Q  GE +G          G GRKQ YGE
Sbjct: 389 YGGRQESDSYGSGGYGRRQESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQRYGE 448

Query: 241 E----QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDD 280
           E      Y REEYERPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D
Sbjct: 449 EGYEGSGYRREEYERPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDED 503

[Close]

BLAST of MS014487 vs. ExPASy TrEMBL
Match: A0A1S3B8M0 (uncharacterized protein At5g39570 OS=Cucumis melo OX=3656 GN=LOC103486981 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.3e-81
Identity = 198/318 (62.26%), Postives = 216/318 (67.92%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRP+SP +ETCYPHSAGNDD+ DYERPQ
Sbjct: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYPHSAGNDDNIDYERPQ 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRR----PGIQIG---GGAYGAKPQPAYG----GS 120
           FESYAEPSAYGD+ALQAEYSSYSRP       P  + G   GG   ++PQPAYG    GS
Sbjct: 61  FESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSGGYESSRPQPAYGFQPSGS 120

Query: 121 EYG----RRPEGYGEEQ----GYGRRPETESYGSEEYGS-GYGRK--PEGYGEEQ----G 180
           EYG    RR   YGE++    GYGR+ ETESYGS EYGS GY RK   E YG E+    G
Sbjct: 121 EYGSEGYRRKPEYGEQEYGSGGYGRKQETESYGSGEYGSGGYRRKQESESYGSEEYVSGG 180

Query: 181 YGRRPEGDSYGSGGYRRQSEYESQEGGEYGRKQSYGEEQG---------SGYGRKQSYGE 240
           YG R E DSYGSGGY R+ E +S   G YGR+Q  GE +G          G GRKQ YGE
Sbjct: 181 YGGRQESDSYGSGGYGRRQESDSYGSGGYGRRQEEGESEGYRRQSESEEYGSGRKQRYGE 240

Query: 241 E----QSYGREEYERPSYGDDPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDD 280
           E      Y REEYERPSYGD+ PR             RPSYGRSEEEDYRKP+YERRD+D
Sbjct: 241 EGYEGSGYRREEYERPSYGDEEPR-------------RPSYGRSEEEDYRKPSYERRDED 295

[Close]

BLAST of MS014487 vs. TAIR 10
Match: AT5G39570.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-59
Identity = 188/355 (52.96%), Postives = 213/355 (60.00%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYTRDD  VDDFDE+DPTPY GG+D+ + YGRPI P DETCYP S+G DDDF+YERP+
Sbjct: 1   MPYYTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRPGIQ--IGGGAY--GAKPQPAYGG-SEYGRRP 120
           F    EPSAYGDEAL  EYSSYSRP  RP  +   GGG +  G +P P YG  S YGR+P
Sbjct: 61  FTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKP 120

Query: 121 E-----GYG--EEQGYGRRPETESYGS---------EEYGSG--------YGRKPEGYGE 180
           E     GYG   E  YGRRPE +SYGS          EYGSG        YGR+PE  G 
Sbjct: 121 ESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPES-GL 180

Query: 181 EQGYGRRPEGD-----SYGSG-----GYRRQSEYESQEGGEYGRKQSYG--EEQGSGYGR 240
             GYG R E +     SYG       GYR+ S   S+E  E  RK SYG  EEQ  GY R
Sbjct: 181 GSGYGGRSESEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-R 240

Query: 241 KQSYG---EEQ-------SYGREE------YERPSYG--DDPPR---RPSYGRSEEED-- 280
           K SYG   EEQ       SYGR E      Y +PSYG  DD      +PSYGRSEE++  
Sbjct: 241 KPSYGRSEEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQEEG 300

[Close]

BLAST of MS014487 vs. TAIR 10
Match: AT3G29075.1 (glycine-rich protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-28
Identity = 98/297 (33.00%), Postives = 154/297 (51.85%), Query Frame = 0


Query: 1   MPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCDETCYPHSAGNDDDFDYERPQ 60
           MPYYT DD  VDDF EYDP PY GG+D+ +TYGR I P DETCYP S+ + D F+Y+RP 
Sbjct: 1   MPYYTNDDNDVDDFTEYDPMPYSGGYDITVTYGRSIPPSDETCYPLSSLSGDAFEYQRPN 60

Query: 61  FESYAEPSAYGDEALQAEYSSYSRPNRRPGIQIGGGAYGAKPQPAYGGSEYGRRPEGYGE 120
           F S  + SAY D+AL+ EYSSY+RP                  P   GS++GR+P     
Sbjct: 61  FSSNHDSSAYDDQALKTEYSSYARPG-----------------PVGSGSDFGRKP----- 120

Query: 121 EQGYGRRPETESYG---SEEYGSGYGRKPEGYGEEQGYGRRPEGDSYGSGGYRRQSEYES 180
             GYG R E E YG     E+GSGYG + E    +  YG   +    G  G+++ S  + 
Sbjct: 121 NSGYGGRTEVE-YGRKTESEHGSGYGGRIESDYVKPSYGGHEDD---GDDGHKKHSGKDY 180

Query: 181 QEGGEYGRKQ-------------SYGEEQGSGYGRKQSYGE---EQSYGREEYERPSYGD 240
            +G E  +K+             +  +++     +K+ Y E   +  Y  ++ ++  Y D
Sbjct: 181 DDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYND 240

Query: 241 DPPRRPSYGRSEEEDYHRPSYGRSEEEDYRKPNYERRDDDDERRYGYGGEEGYGRKK 279
           D  ++     ++++D  +  +  ++++D +K   E  DD+D+++  +   +   +KK
Sbjct: 241 DDEKKKKKHYNDDDDEKKKKHNYNDDDDEKKKKKEYHDDEDKKKKKHYDNDDDEKKK 271

The following BLAST results are available for this feature:

BLAST of MS014487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144440.1	1.6e-106	97.20	uncharacterized protein At5g39570-like, partial [Momordica charantia]	[more]
XP_004136693.1	1.3e-84	64.22	uncharacterized protein At5g39570 [Cucumis sativus] >KGN59544.1 hypothetical pro...	[more]
XP_008443383.1	1.5e-80	62.26	PREDICTED: uncharacterized protein At5g39570 [Cucumis melo] >TYK25620.1 uncharac...	[more]
KAA0053783.1	1.5e-80	62.26	uncharacterized protein E6C27_scaffold135G001680 [Cucumis melo var. makuwa]	[more]
XP_038905403.1	2.2e-79	62.83	uncharacterized protein At5g39570 [Benincasa hispida]	[more]

BLAST of MS014487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKA5	3.8e-58	52.96	Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 P...	[more]

BLAST of MS014487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRM1	7.8e-107	97.20	uncharacterized protein At5g39570-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LF79	6.4e-85	64.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824890 PE=4 SV=1	[more]
A0A5D3DQS1	7.3e-81	62.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UCY4	7.3e-81	62.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8M0	7.3e-81	62.26	uncharacterized protein At5g39570 OS=Cucumis melo OX=3656 GN=LOC103486981 PE=4 S...	[more]

BLAST of MS014487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39570.1	2.7e-59	52.96	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G29075.1	4.2e-28	33.00	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..279
None	No IPR available	PANTHER	PTHR33971:SF1	OS06G0232000 PROTEIN	coord: 1..279
IPR038943	PLD-regulated protein1-like	PANTHER	PTHR33971	OS06G0232000 PROTEIN	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014487.1	MS014487.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0070300	phosphatidic acid binding