MS013208 (gene) Bitter gourd (TR) v1

Overview


Name	MS013208
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein ABA DEFICIENT 4, chloroplastic
Location	scaffold459: 1208140 .. 1210114 (+)
RNA-Seq Expression	MS013208
Synteny	MS013208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGTAATCTCTTTGCCTTTTGAGCATTTTAAAATTACTGAGTGCCTTTAGAGTTGAATAACTAAAATTATCTCAAGTGAATGGCTGATACTTTGCCTCGACAGTACTGCACATGATTTGTTTCCTCGACAGGAGTGAATTTAGAAGTCAAAGGCATACTAATGCTCGAGCTTCTGCTCCCCTTTTCCTAGTTCCATGAAAACAATGTTTGGCTTGGATGTGTTTAGCATATGGCTAGTGTTCCGTTTGAGCGAAGATCAAACTTTTCTTTCGAGTATGATTGGGTTCTTGTGGTGGTAGAATCTGGTCAACCGGGTGTACTAATTTCCAGCATCTTGTGAACCTTACTTCCCTTATGTTTTTTGCAATTGTCATACTTATTCCTCGCTTTTCGGAGAGTGATAGTAGAGGGTGGGTGTCTTGGATGAGTTCAAGTTTCTCAACGTTTCCTTCTTAATATTTAAGTTCAGTGAGACTTGTTTTCTCAATATACTCTGTCACCACACCTCATTTGGCTGTGTACATTATATTTGAATAACTTCATGTTTGCATTTACAGGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGGTATGCAAAATTTCATAAATGTACTCATTTTTGTCCATCACTTTTTACATTAGCTCTGGGGTATGTTTATTTATTTATTTTTTCTCTTTGCACTCTTTTTCTTCGATATTTCATCTCGACAAATGGAACTTTTTTTTCCTCTTTATGCAGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGGTAAGTTCTTAACAATTTGAGAAATTTGAAGCATCTCGTCTCGTCCGACCCATCCATTTGTTCTTCAACTCATTGTATGTGGCTCTGTTAATGTATAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGTCTCTCTCTCTCTCATTAGTTGATTCATTTAGTTATTAGGAGCATGTATAACTTATATCTCAAGCCAACATTTTATATATATTAGCTGAGCATGCAATTTGCCTTTGACCTAGTTTCAATGAGTTTTTTTGCTTGAACGGAAATTGCTAATGAAATTTGTTAGTAAAACTATAAGTTTGGTACTAGTCCATCTGTACTTATGTAGATTGAACTTTTAATCTTGTATCTAATAGATCTATATCGTTACCGGGTAGATATAAAATTGAAAGTTCTAATAGAAACTCAGTTAGAAACTTCTCATTACCATTTAAGTACCAAATAAAACCAAATTTGTAATTTAACCAAGGATTTTTCAAGAGTGAAAATTTGAGGGTAAAATTGTAACTTTCAAAAGGTTAAAAGGCAGAATTGAATTTAACTACATATTTTAAGGGTATTTTGTATAATTTAGCTTTAAGAGTTTTTCAATCTTTTAATAGCCATCCTCTAAACTTTCCAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA

mRNA sequence

CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA

Coding sequence (CDS)

CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA

Protein sequence

QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT

Homology

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BLAST of MS013208 vs. NCBI nr
Match: XP_022148183.1 (protein ABA DEFICIENT 4, chloroplastic [Momordica charantia] >XP_022148184.1 protein ABA DEFICIENT 4, chloroplastic [Momordica charantia])

HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121
Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS 60
           +ITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS
Sbjct: 18  KITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS 77

Query: 61  KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL 120
           KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL
Sbjct: 78  KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL 137

Query: 121 YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH 180
           YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH
Sbjct: 138 YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH 197

Query: 181 DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTR+GPAKHGT
Sbjct: 198 DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRSGPAKHGT 241

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BLAST of MS013208 vs. NCBI nr
Match: XP_022983661.1 (protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima] >XP_022983662.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 395.6 bits (1015), Expect = 2.9e-106
Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA V
Sbjct: 18  KITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADV-SRNWSFITGSRIAIKPKLARV 77

Query: 61  DLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 120
           DLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELT+RSMQSNIPYVV
Sbjct: 78  DLSKKVHGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTRRSMQSNIPYVV 137

Query: 121 LGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAAR 180
           LGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAAR
Sbjct: 138 LGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTLASAWIHLLVVDLFAAR 197

Query: 181 QVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           QVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHGT
Sbjct: 198 QVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPAKHGT 244

[Close]

BLAST of MS013208 vs. NCBI nr
Match: XP_022935036.1 (protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata] >XP_022935038.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata] >XP_022935039.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-105
Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADVS   WSFITGSRI +KPKLA V
Sbjct: 18  KITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADVSG-NWSFITGSRIAIKPKLARV 77

Query: 61  DLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 120
           DLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVV
Sbjct: 78  DLSKKVRGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 137

Query: 121 LGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAAR 180
           LGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAAR
Sbjct: 138 LGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTLASAWIHLLVVDLFAAR 197

Query: 181 QVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           QVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHGT
Sbjct: 198 QVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPAKHGT 244

[Close]

BLAST of MS013208 vs. NCBI nr
Match: KAG6581180.1 (Protein ABA DEFICIENT 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 200/228 (87.72%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA V
Sbjct: 18  KITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADV-SRNWSFITGSRIAIKPKLARV 77

Query: 61  DLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 120
           DLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVV
Sbjct: 78  DLSKKVRGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 137

Query: 121 LGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAAR 180
           LGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAAR
Sbjct: 138 LGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTLASAWIHLLVVDLFAAR 197

Query: 181 QVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           QVFHDG+ENQIETRHSVS+CLFFCPIGVLIHVITKALT R GPAK GT
Sbjct: 198 QVFHDGVENQIETRHSVSICLFFCPIGVLIHVITKALTHRDGPAKRGT 244

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BLAST of MS013208 vs. NCBI nr
Match: XP_008461596.1 (PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo] >XP_008461597.1 PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 196/227 (86.34%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSI TRSHK NL    V+GLTAD +SR WSFITGSRI +KPKL+ V
Sbjct: 18  KITKPCCDVRLGQRSSIFTRSHKLNLLGQPVHGLTAD-ASRNWSFITGSRIAIKPKLSKV 77

Query: 61  DLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 120
           D SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVVL
Sbjct: 78  DFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 137

Query: 121 GLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQ 180
           GLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQ
Sbjct: 138 GLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLASAWIHLLVVDLFAARQ 197

Query: 181 VFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           VFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHG+
Sbjct: 198 VFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAKHGS 243

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BLAST of MS013208 vs. ExPASy Swiss-Prot
Match: Q8LFP9 (Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.7e-65
Identity = 124/203 (61.08%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 15  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASW 74
           SS+S      +   + L  D S      +WSFI GSRI ++     V + KK  GV ASW
Sbjct: 13  SSLSVMKRNVSAKRSELCLDSSKIRLDHRWSFIGGSRISVQSNSYTV-VHKKFSGVRASW 72

Query: 75  LANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWT 134
           L   QIAS+ F +GT AVLPFY LMV+APK+E+TK+ M+S++PY++LG+LY YLLY+SWT
Sbjct: 73  LTTTQIASSVFAVGTTAVLPFYTLMVVAPKAEITKKCMESSVPYIILGVLYVYLLYISWT 132

Query: 135 PETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETR 194
           PET++ +F+SKY LPEL G++KMFSSEMTLASAWIHLLVVDLFAARQV++DGLENQIETR
Sbjct: 133 PETLKYMFSSKYMLPELSGIAKMFSSEMTLASAWIHLLVVDLFAARQVYNDGLENQIETR 192

Query: 195 HSVSLCLFFCPIGVLIHVITKAL 214
           HSVSLCL FCP+G++ H +TKA+
Sbjct: 193 HSVSLCLLFCPVGIVSHFVTKAI 214

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BLAST of MS013208 vs. ExPASy Swiss-Prot
Match: Q5ZEG0 (Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MHZ4 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59
Identity = 117/215 (54.42%), Postives = 154/215 (71.63%), Query Frame = 0


Query: 10  RIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHA- 69
           R+G  + ++ R  +P +   G     S    +    +R  L+P+LA V          A 
Sbjct: 12  RVGVAAPLALRQQRPVVLPGGQLRTGSGAGAASAWAAR-PLRPELAAVSRPAVPARGRAP 71

Query: 70  -----SWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLLYAY 129
                +W+A++QIAS+AFT GT+AVLPFY LMV+AP +++TKR++ S+ PYV LG+LYAY
Sbjct: 72  LFRPRAWMASSQIASSAFTWGTIAVLPFYTLMVVAPNADVTKRAVDSSAPYVALGILYAY 131

Query: 130 LLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGL 189
           LLYLSWTP+T++ +FASKYWLPEL G+ +MF+SEMT+ASAWIHLL VDLFAARQV+HDG+
Sbjct: 132 LLYLSWTPDTLRAMFASKYWLPELTGIVRMFASEMTVASAWIHLLAVDLFAARQVYHDGI 191

Query: 190 ENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAG 219
           +N IETRHSVSLCL FCPIG+  HV+TK L    G
Sbjct: 192 KNNIETRHSVSLCLLFCPIGIATHVLTKVLAGSIG 225

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BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1D387 (protein ABA DEFICIENT 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016919 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS 60
           +ITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS
Sbjct: 18  KITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLS 77

Query: 61  KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL 120
           KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL
Sbjct: 78  KKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLL 137

Query: 121 YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH 180
           YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH
Sbjct: 138 YAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFH 197

Query: 181 DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTR+GPAKHGT
Sbjct: 198 DGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRSGPAKHGT 241

[Close]

BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1IZZ7 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482208 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA V
Sbjct: 18  KITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADV-SRNWSFITGSRIAIKPKLARV 77

Query: 61  DLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 120
           DLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELT+RSMQSNIPYVV
Sbjct: 78  DLSKKVHGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTRRSMQSNIPYVV 137

Query: 121 LGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAAR 180
           LGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAAR
Sbjct: 138 LGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTLASAWIHLLVVDLFAAR 197

Query: 181 QVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           QVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHGT
Sbjct: 198 QVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPAKHGT 244

[Close]

BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1F3F1 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442024 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.0e-105
Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADVS   WSFITGSRI +KPKLA V
Sbjct: 18  KITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADVSG-NWSFITGSRIAIKPKLARV 77

Query: 61  DLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 120
           DLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVV
Sbjct: 78  DLSKKVRGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVV 137

Query: 121 LGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAAR 180
           LGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAAR
Sbjct: 138 LGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTLASAWIHLLVVDLFAAR 197

Query: 181 QVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           QVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHGT
Sbjct: 198 QVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPAKHGT 244

[Close]

BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A1S3CFJ8 (protein ABA DEFICIENT 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500161 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.6e-105
Identity = 196/227 (86.34%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +ITKPCCDVR+GQRSSI TRSHK NL    V+GLTAD +SR WSFITGSRI +KPKL+ V
Sbjct: 18  KITKPCCDVRLGQRSSIFTRSHKLNLLGQPVHGLTAD-ASRNWSFITGSRIAIKPKLSKV 77

Query: 61  DLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 120
           D SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVVL
Sbjct: 78  DFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 137

Query: 121 GLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQ 180
           GLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQ
Sbjct: 138 GLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLASAWIHLLVVDLFAARQ 197

Query: 181 VFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT 225
           VFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT R GPAKHG+
Sbjct: 198 VFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAKHGS 243

[Close]

BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A0A0LCH1 (FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G280950 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.9e-102
Identity = 190/225 (84.44%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGV 60
           +I+KPCCDVR+G RSS+ TRSHK NL    V+G TAD +SR WSFITGSRI +KPKL+ V
Sbjct: 18  KISKPCCDVRLGLRSSVFTRSHKTNLLGQPVHGFTAD-ASRNWSFITGSRIAIKPKLSRV 77

Query: 61  DLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 120
           + SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAPKSELTKRSMQSNIPYVVL
Sbjct: 78  NFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKSELTKRSMQSNIPYVVL 137

Query: 121 GLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQ 180
           GLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQ
Sbjct: 138 GLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLASAWIHLLVVDLFAARQ 197

Query: 181 VFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKH 223
           VFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT R GPAKH
Sbjct: 198 VFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAKH 241

[Close]

BLAST of MS013208 vs. TAIR 10
Match: AT1G67080.1 (abscisic acid (aba)-deficient 4 )

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-66
Identity = 124/203 (61.08%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 15  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASW 74
           SS+S      +   + L  D S      +WSFI GSRI ++     V + KK  GV ASW
Sbjct: 13  SSLSVMKRNVSAKRSELCLDSSKIRLDHRWSFIGGSRISVQSNSYTV-VHKKFSGVRASW 72

Query: 75  LANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWT 134
           L   QIAS+ F +GT AVLPFY LMV+APK+E+TK+ M+S++PY++LG+LY YLLY+SWT
Sbjct: 73  LTTTQIASSVFAVGTTAVLPFYTLMVVAPKAEITKKCMESSVPYIILGVLYVYLLYISWT 132

Query: 135 PETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETR 194
           PET++ +F+SKY LPEL G++KMFSSEMTLASAWIHLLVVDLFAARQV++DGLENQIETR
Sbjct: 133 PETLKYMFSSKYMLPELSGIAKMFSSEMTLASAWIHLLVVDLFAARQVYNDGLENQIETR 192

Query: 195 HSVSLCLFFCPIGVLIHVITKAL 214
           HSVSLCL FCP+G++ H +TKA+
Sbjct: 193 HSVSLCLLFCPVGIVSHFVTKAI 214

The following BLAST results are available for this feature:

BLAST of MS013208 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148183.1	2.4e-121	99.11	protein ABA DEFICIENT 4, chloroplastic [Momordica charantia] >XP_022148184.1 pro...	[more]
XP_022983661.1	2.9e-106	88.60	protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima] >XP_022983662.1 protei...	[more]
XP_022935036.1	4.2e-105	88.16	protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata] >XP_022935038.1 prot...	[more]
KAG6581180.1	1.6e-104	87.72	Protein ABA DEFICIENT 4, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_008461596.1	1.6e-104	86.34	PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo] >XP_...	[more]

BLAST of MS013208 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP9	9.7e-65	61.08	Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 P...	[more]
Q5ZEG0	6.1e-59	54.42	Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MH...	[more]

BLAST of MS013208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D387	1.2e-121	99.11	protein ABA DEFICIENT 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IZZ7	1.4e-106	88.60	protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114822...	[more]
A0A6J1F3F1	2.0e-105	88.16	protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S3CFJ8	7.6e-105	86.34	protein ABA DEFICIENT 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LCH1	7.9e-102	84.44	FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G280950 PE=4 SV...	[more]

BLAST of MS013208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67080.1	6.9e-66	61.08	abscisic acid (aba)-deficient 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025461	ABA DEFICIENT 4-like	PFAM	PF14108	DUF4281	coord: 80..207 e-value: 3.5E-37 score: 127.6
None	No IPR available	PANTHER	PTHR34543	PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC	coord: 8..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013208.1	MS013208.1	mRNA