MS013002 (gene) Bitter gourd (TR) v1

Overview


Name	MS013002
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RAB GTPase homolog 1A
Location	scaffold38: 1383853 .. 1387008 (-)
RNA-Seq Expression	MS013002
Synteny	MS013002

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTACTTCTGTGCAGTGATTATTTGTTTAAGCTCTTGCTTATTGGAGATTCTGGTGTTGGCAAATCATGTCTCCTTTTGAGGTTTGCAGTAAGTGCTCAGCGATATTACTACTGTTTTGTTTATAATTCACAAATTTTTTGGTTCTGAGTTATGCTTTCAATTCACAACTAATATGTTAGGATCTTAAATACACTAAACGAAACAAGATAACTATAATGTAATATCAAATGATGTTACAATATCAATAGCCTTTCGATAGAGCTATCTCTCTCCCAAAGAACCATGCTAAGTTCTTCACCCTAAACTATTTCCCGAAAGATGCCTTCCCTCTCTCCCTACTACTTCAGTTTATAATAAACTTACCCCTAACTAATTACGCTAAGGCCTCTAACTACAATATTAATACTATTCCCATACTATCCTTATTTTGACTCTCACATAATAACCCCATACTGATTCACTTTTCCAACTTCTATCACATGTTGTGTGGTTTTGGTGTGAGATATATTGTTGCAGACTTGTAGTTGACTAAGAATAACCATCTTGTGTGCGTTGTAGTGTTCTGTATGCAGTTTTACTTCAGAAGTGGTGGCTAGTTTAGATGGTCGTGGTATCAGACTTGTTTAATAGTGAACTTAGGATTTTTTTGGATCAATTTTGTTCGCGGTCTTGATTCTACCAATTTGGTCAGTTGGATTGTTGGAGTCATACATTGTGTTTCTTTTTTCTTTGGACTCTGTTACGAAAAGGGACTTGTATGTTACCCTTAGTAGTTGTTCTTTAGGCACTGATATTTCTTGTATCTCAAGTGCTGTATTTGGACTAATGGAGTGGAGTTATTGCAGTGTTTATGTTTAATTTTAACTATTTTTTTGTTTCTATTTTCTTGCTGACCAGGACGATTCATATTTGGATAGCTACATTAGCACCATTGGGGTTGACTTTGTAAGTTTTGAGTTTATTCTCTTCTGATATTGTTATTGATTGCTTTGAAGAAATTAATTGTTCTAATATATGTTGTGTTTCCATTCTTTTAGAAAATCCGCACAGTGGAACTCGATGGGAAGACTATTAAGCTCCAAATAGTAAGTTTAATATCTCATAGTTTTCTTCTTATGTACATATCATTTTTGTCCAAATTCTGGCGTTGAATATACAAAATAAACATTTGAGTGTAGAATAGAATAAGAGGTCTTAATCACATGCCTTCCAATAAAGGTGGCTGATGTGCAGCGTTGACTTGATGTCTAACGAAATAAAATTCCTTTCTAAGTTATTATGGAGGTCGCGTGGGTTGTTTTCTTTTATTTTCACGGCTTCTAATGTGCTTTTAGTTGATAGTACGTTAATGCACTTAAAATATTTTATAAATTTGTATGGAAGTAACTAACTGCCTTTGAGATACGGTGGTCTGGACTTGGAGTGCCCATGTGGACCGATTGTTGGTTCCAGTCAAGATTTTAAATGTTGATAACGATGGAAATGTTGAGGTCTCAATTTCATGAAAATATCGATAAAATGTCGATGTCAATAGATATTTCTCTAAAAGTTAGATAAATTGAAAAATTGTAAAAAATATTTAATTGAACAAATAAATATTTTTCTATTTCTAAATAAGTTAAAAATGACTAATATTAATATTATGTATGTATTAGTGATATTTTGTTGATATTTTCATATTTTGTCGATTTTTGTTGTACTATGATGGAAATGTCGATTTACCCCTCATATTGATGTTGAACCCATTACATGGACATGTCGATGGGAATATCGAAGTATCGACGGATATTTAATACCATGGTTCCAGTTTATAAATTAAGGTAACTAATTTGAACGATATGGTCGAGACCATTATTTTTAGAACGTCTCTTTTTACCATCTATACATGCAGAGAGCAGACATAACACTGAAGCAGGATACTCACGATCAAATCCACACAAAATATTGTTGTCACAATTAGAGACACGACCGCAAACCTTCACTTGTTTTTGGTCATAAGAAAAGTCTCTTCTGTTTTTTTTTTTTTTTTTGCTCTCAAATGCATTTTACCCTCCAAATTATACATAACTGCTATTATATTGTTGTAAATAGGAGTTAAACAAACTTTTTCTTACAATGTGCAGTGGGATACTGCTGGCCAAGAACGTTTTAGAACAATAACCAGCAGCTACTACCGTGGTGCTCATGGCATTATTGTAAGAGTCACATAGTCCCTAAAACTCTCTCTCTCACTCTCTATATATATATGTTTATCGGGTTTAGTAGTGCGTGGTAAGTTACTCTGAATCTTGTAAACTCTTGGCAGGTTGTTTATGATGTTACAGATCAAGACAGTTTCAATAATGTTAAGCAATGGTTAAATGAAATTGATCGTTATGCAAGTGAAAACGTGAATAAGCTTCTTGTGGGTAATAAGTCCGACCTGACGGCAAACAAAGTCGTCTCCCACGAGACAGCAAAGGTATTATATTTCATTAGATTCATTCTTTACTAGTTGAAGTATCTACCTTTTGGCCCTGAAAAAGCTTAGAGAAGTGAGACTTTTTTATGTTTTCTTTTTTAGGCATTTGCGGATGAAATTGGAATCCCCTTTATGGAAACAAGTGCTAAAAGTGCCACGAACGTTGAACAGGCTTTCATGGCCATGGCTGCTGAAATCAAGAATAGGTGAGTTCACTTTTGACCTTATCAGGGAGGGCTTAAACCATCTAGGAGTAAGAAATACTTCGGGTGTTGGGTTCGATAGGTTTATACAATCCGCAGGCATCTATGTTTAGGATGTGGATTTGTTCATCCCGAGCCATGAGTTTTCTAAATCCATGGATTCGCACACTAAGGTTGTATGGATTTCGCATACTTTCTCAAATCATAAGCTACAAATCAAACACAAAGTGCACAAACTTAACATTTTCGATCCTAAACTTATCAATACCGTGATTGTGAGTCTATCTGAAGCCATTTGTACTACTAGTTTAGGAAGCTTTTCCATGTGTATAAGTTGGTCTGAACACCTCAATCTCGAAGCTTGTATGATCTGACTTGTAAAACACGATTATTTTCAGGATGGCGACTCAACCAATGAACAATGCGCGGCCGCCAACCGTGCAAATTCGAGGACAGCCAGTGAACCAAAAGTCTGGTTGCTGCTCGTCG

mRNA sequence

ATTTTACTTCTGTGCAGTGATTATTTGTTTAAGCTCTTGCTTATTGGAGATTCTGGTGTTGGCAAATCATGTCTCCTTTTGAGGTTTGCAGACGATTCATATTTGGATAGCTACATTAGCACCATTGGGGTTGACTTTAAAATCCGCACAGTGGAACTCGATGGGAAGACTATTAAGCTCCAAATATGGGATACTGCTGGCCAAGAACGTTTTAGAACAATAACCAGCAGCTACTACCGTGGTGCTCATGGCATTATTGTTGTTTATGATGTTACAGATCAAGACAGTTTCAATAATGTTAAGCAATGGTTAAATGAAATTGATCGTTATGCAAGTGAAAACGTGAATAAGCTTCTTGTGGGTAATAAGTCCGACCTGACGGCAAACAAAGTCGTCTCCCACGAGACAGCAAAGGCATTTGCGGATGAAATTGGAATCCCCTTTATGGAAACAAGTGCTAAAAGTGCCACGAACGTTGAACAGGCTTTCATGGCCATGGCTGCTGAAATCAAGAATAGGATGGCGACTCAACCAATGAACAATGCGCGGCCGCCAACCGTGCAAATTCGAGGACAGCCAGTGAACCAAAAGTCTGGTTGCTGCTCGTCG

Coding sequence (CDS)

ATTTTACTTCTGTGCAGTGATTATTTGTTTAAGCTCTTGCTTATTGGAGATTCTGGTGTTGGCAAATCATGTCTCCTTTTGAGGTTTGCAGACGATTCATATTTGGATAGCTACATTAGCACCATTGGGGTTGACTTTAAAATCCGCACAGTGGAACTCGATGGGAAGACTATTAAGCTCCAAATATGGGATACTGCTGGCCAAGAACGTTTTAGAACAATAACCAGCAGCTACTACCGTGGTGCTCATGGCATTATTGTTGTTTATGATGTTACAGATCAAGACAGTTTCAATAATGTTAAGCAATGGTTAAATGAAATTGATCGTTATGCAAGTGAAAACGTGAATAAGCTTCTTGTGGGTAATAAGTCCGACCTGACGGCAAACAAAGTCGTCTCCCACGAGACAGCAAAGGCATTTGCGGATGAAATTGGAATCCCCTTTATGGAAACAAGTGCTAAAAGTGCCACGAACGTTGAACAGGCTTTCATGGCCATGGCTGCTGAAATCAAGAATAGGATGGCGACTCAACCAATGAACAATGCGCGGCCGCCAACCGTGCAAATTCGAGGACAGCCAGTGAACCAAAAGTCTGGTTGCTGCTCGTCG

Protein sequence

ILLLCSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDLTANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPTVQIRGQPVNQKSGCCSS

Homology

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BLAST of MS013002 vs. NCBI nr
Match: KAA0041057.1 (GTP-binding protein YPTM2-like [Cucumis melo var. makuwa] >TYK12051.1 GTP-binding protein YPTM2-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-106
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   ILLLCSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL 60
           +LL CSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL
Sbjct: 24  LLLSCSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL 83

Query: 61  QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV 120
           QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV
Sbjct: 84  QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV 143

Query: 121 GNKSDLTANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN 180
           GNKSDLTANKVVS+ETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN
Sbjct: 144 GNKSDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN 203

Query: 181 NARPPTVQIRGQPVNQKSGCCSS 204
           NARPPTVQIRGQPVNQKSGCCSS
Sbjct: 204 NARPPTVQIRGQPVNQKSGCCSS 226

[Close]

BLAST of MS013002 vs. NCBI nr
Match: XP_022948506.1 (GTP-binding protein YPTM2-like [Cucurbita moschata] >XP_023005554.1 GTP-binding protein YPTM2 [Cucurbita maxima] >XP_023540776.1 GTP-binding protein YPTM2-like [Cucurbita pepo subsp. pepo] >KAG6596880.1 GTP-binding protein YPTM2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQKSGCCSS
Sbjct: 186 VQIRGQPVNQKSGCCSS 202

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BLAST of MS013002 vs. NCBI nr
Match: KAG7030156.1 (GTP-binding protein YPTM2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVN+KSGCCSS
Sbjct: 186 VQIRGQPVNKKSGCCSS 202

[Close]

BLAST of MS013002 vs. NCBI nr
Match: XP_022155520.1 (GTP-binding protein YPTM2-like [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           V+IRGQPVNQKSGCCSS
Sbjct: 186 VKIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. NCBI nr
Match: XP_004147230.1 (GTP-binding protein YPTM2 [Cucumis sativus] >XP_008448792.1 PREDICTED: GTP-binding protein YPTM2-like [Cucumis melo] >KGN55832.1 hypothetical protein Csa_011251 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 5.4e-104
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVS+ETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQKSGCCSS
Sbjct: 186 VQIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.7e-97
Identity = 180/198 (90.91%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGII+VYDVTDQ+SFNNVKQWLNEIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQP-MNNARPP 186
           TANKVV+ ETAKAFADE+GIPFMETSAK+ATNV+QAFMAMAA IK+RMA+QP   NARP 
Sbjct: 126 TANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPA 185

Query: 187 TVQIRGQPVNQKSGCCSS 204
           TVQIRGQPVNQK+ CCSS
Sbjct: 186 TVQIRGQPVNQKTSCCSS 203

[Close]

BLAST of MS013002 vs. ExPASy Swiss-Prot
Match: Q9FPJ4 (Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-96
Identity = 176/197 (89.34%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASENVNKLLVGNK+DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           T+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A IK RMA+QP   A+PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQ+SGCCSS
Sbjct: 186 VQIRGQPVNQQSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-95
Identity = 175/197 (88.83%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           T+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A IK RMA+QP   ++PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQ+SGCCSS
Sbjct: 186 VQIRGQPVNQQSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy Swiss-Prot
Match: P28188 (Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3)

HSP 1 Score: 347.8 bits (891), Expect = 8.2e-95
Identity = 173/198 (87.37%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGII+VYDVTD++SFNNVKQWL+EIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPM-NNARPP 186
           T N+ + +ETAKAFADEIGIPFMETSAK ATNVEQAFMAM+A IK RMA+QP  NNARPP
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

Query: 187 TVQIRGQPVNQKSGCCSS 204
           TVQIRGQPV QK+GCCS+
Sbjct: 186 TVQIRGQPVAQKNGCCST 203

[Close]

BLAST of MS013002 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 337.8 bits (865), Expect = 8.5e-92
Identity = 171/197 (86.80%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNA-RPP 186
             N+VVS+E  KA ADEIGIPF+ETSAK ATNVE+AFM MA EIKNRMA+QP  NA +P 
Sbjct: 126 AENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185

Query: 187 TVQIRGQPVNQKSGCCS 203
           TVQ+RGQPV Q+S CCS
Sbjct: 186 TVQMRGQPVAQQSSCCS 202

[Close]

BLAST of MS013002 vs. ExPASy TrEMBL
Match: A0A5D3CJS0 (GTP-binding protein YPTM2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00640 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   ILLLCSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL 60
           +LL CSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL
Sbjct: 24  LLLSCSDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKL 83

Query: 61  QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV 120
           QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV
Sbjct: 84  QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLV 143

Query: 121 GNKSDLTANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN 180
           GNKSDLTANKVVS+ETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN
Sbjct: 144 GNKSDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMN 203

Query: 181 NARPPTVQIRGQPVNQKSGCCSS 204
           NARPPTVQIRGQPVNQKSGCCSS
Sbjct: 204 NARPPTVQIRGQPVNQKSGCCSS 226

[Close]

BLAST of MS013002 vs. ExPASy TrEMBL
Match: A0A6J1KZK2 (GTP-binding protein YPTM2 OS=Cucurbita maxima OX=3661 GN=LOC111498506 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQKSGCCSS
Sbjct: 186 VQIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy TrEMBL
Match: A0A6J1G9D5 (GTP-binding protein YPTM2-like OS=Cucurbita moschata OX=3662 GN=LOC111452162 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQKSGCCSS
Sbjct: 186 VQIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy TrEMBL
Match: A0A6J1DMM8 (GTP-binding protein YPTM2-like OS=Momordica charantia OX=3673 GN=LOC111022645 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           V+IRGQPVNQKSGCCSS
Sbjct: 186 VKIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. ExPASy TrEMBL
Match: A0A0A0L5E9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017260 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           TANKVVS+ETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT
Sbjct: 126 TANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQKSGCCSS
Sbjct: 186 VQIRGQPVNQKSGCCSS 202

[Close]

BLAST of MS013002 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 352.1 bits (902), Expect = 3.1e-97
Identity = 176/197 (89.34%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASENVNKLLVGNK+DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           T+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A IK RMA+QP   A+PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQ+SGCCSS
Sbjct: 186 VQIRGQPVNQQSGCCSS 202

[Close]

BLAST of MS013002 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 175/197 (88.83%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPT 186
           T+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A IK RMA+QP   ++PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 187 VQIRGQPVNQKSGCCSS 204
           VQIRGQPVNQ+SGCCSS
Sbjct: 186 VQIRGQPVNQQSGCCSS 202

[Close]

BLAST of MS013002 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 347.8 bits (891), Expect = 5.8e-96
Identity = 173/198 (87.37%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGII+VYDVTD++SFNNVKQWL+EIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPM-NNARPP 186
           T N+ + +ETAKAFADEIGIPFMETSAK ATNVEQAFMAM+A IK RMA+QP  NNARPP
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

Query: 187 TVQIRGQPVNQKSGCCSS 204
           TVQIRGQPV QK+GCCS+
Sbjct: 186 TVQIRGQPVAQKNGCCST 203

[Close]

BLAST of MS013002 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 294.7 bits (753), Expect = 5.8e-80
Identity = 145/197 (73.60%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTITSSYYRGAHGII+VYD T+ +SFNNVKQWL+EIDRYA+E+V KLL+GNK+D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 127 TANKVVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNN--ARP 186
             +KVVS ET +A ADE+GIPF+ETSAK + NVEQAF+ +A EIK +M +Q   N  + P
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

Query: 187 PTVQIRGQPVNQKSGCC 202
            TVQ++GQP+ Q +G C
Sbjct: 186 GTVQMKGQPIQQNNGGC 202

[Close]

BLAST of MS013002 vs. TAIR 10
Match: AT3G09900.1 (RAB GTPase homolog E1E )

HSP 1 Score: 241.1 bits (614), Expect = 7.7e-64
Identity = 123/205 (60.00%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 7   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 66
           DYL KLLLIGDSGVGKSCLLLRF+DD++  S+I+TIG+DFKIRTVELDGK IKLQIWDTA
Sbjct: 13  DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTA 72

Query: 67  GQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDL 126
           GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS++VNK+LVGNK+D+
Sbjct: 73  GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADM 132

Query: 127 TANK-VVSHETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPP 186
             +K  V     +A ADE GI F ETSAK+  NVEQ F+++A +IK R+ T+    A P 
Sbjct: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRL-TESDTKAEPQ 192

Query: 187 TVQIRGQ--------PVNQKSGCCS 203
            ++I  Q          N+KS CCS
Sbjct: 193 GIKITKQDANKASSSSTNEKSACCS 216

The following BLAST results are available for this feature:

BLAST of MS013002 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041057.1	4.4e-106	98.52	GTP-binding protein YPTM2-like [Cucumis melo var. makuwa] >TYK12051.1 GTP-bindin...	[more]
XP_022948506.1	1.1e-104	100.00	GTP-binding protein YPTM2-like [Cucurbita moschata] >XP_023005554.1 GTP-binding ...	[more]
KAG7030156.1	3.2e-104	99.49	GTP-binding protein YPTM2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022155520.1	3.2e-104	99.49	GTP-binding protein YPTM2-like [Momordica charantia]	[more]
XP_004147230.1	5.4e-104	99.49	GTP-binding protein YPTM2 [Cucumis sativus] >XP_008448792.1 PREDICTED: GTP-bindi...	[more]

BLAST of MS013002 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05737	8.7e-97	90.91	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
Q9FPJ4	4.3e-96	89.34	Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1	[more]
Q9SEH3	1.6e-95	88.83	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
P28188	8.2e-95	87.37	Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3	[more]
P40392	8.5e-92	86.80	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]

BLAST of MS013002 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJS0	2.2e-106	98.52	GTP-binding protein YPTM2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1KZK2	5.3e-105	100.00	GTP-binding protein YPTM2 OS=Cucurbita maxima OX=3661 GN=LOC111498506 PE=4 SV=1	[more]
A0A6J1G9D5	5.3e-105	100.00	GTP-binding protein YPTM2-like OS=Cucurbita moschata OX=3662 GN=LOC111452162 PE=...	[more]
A0A6J1DMM8	1.5e-104	99.49	GTP-binding protein YPTM2-like OS=Momordica charantia OX=3673 GN=LOC111022645 PE...	[more]
A0A0A0L5E9	2.6e-104	99.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017260 PE=4 SV=1	[more]

BLAST of MS013002 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47200.1	3.1e-97	89.34	RAB GTPase homolog 1A	[more]
AT4G17530.1	1.2e-96	88.83	RAB GTPase homolog 1C	[more]
AT1G02130.1	5.8e-96	87.37	RAS 5	[more]
AT3G11730.1	5.8e-80	73.60	Ras-related small GTP-binding family protein	[more]
AT3G09900.1	7.7e-64	60.00	RAB GTPase homolog E1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 33..49 score: 34.84 coord: 10..31 score: 56.84 coord: 113..126 score: 55.32 coord: 148..170 score: 46.0 coord: 51..73 score: 59.25
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 e-value: 1.5E-36 score: 137.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..200 e-value: 2.5E-6 score: 37.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 e-value: 2.6E-109 score: 379.1
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..174 e-value: 0.0025 score: 2.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..203
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 6..202
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 6..202
None	No IPR available	PROSITE	PS51419	RAB	coord: 5..203 score: 38.468697
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..175 score: 10.731699
None	No IPR available	PROSITE	PS51417	ARF	coord: 1..179 score: 8.69595
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 8..173 e-value: 8.63554E-130 score: 360.106
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..172 e-value: 2.1E-16 score: 70.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 11..171 e-value: 1.4E-66 score: 223.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 4..203 score: 20.134331
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 8..164 e-value: 2.1E-33 score: 113.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..201 e-value: 1.1E-76 score: 258.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013002.1	MS013002.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding