MS012982 (gene) Bitter gourd (TR) v1

Overview


Name	MS012982
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor ERF039
Location	scaffold38: 1180947 .. 1181588 (-)
RNA-Seq Expression	MS012982
Synteny	MS012982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATCCTCTCCACATATTTCAATTTCAGTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTGAGATCAAAAATTGCAGCAAAGAAATCATCAAGGGCTCCAAAAAGGTGAAACTCGGGAGCGACGGCAAGCATCCCACATATCGCGGCGTCCGAATGCGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAACCAAAGAAGAAATCGCGGATTTGGCTGGGCACATTCTCCACGCCGGAAATGGCGGCCAGAGCCCACGACGTCGCCGCCCGGACAATCAAAGGCCGCGCCGCCTTCCTCAACTTCCCGGAGCTCGCCCACCGCCTCCCCCGTCCGGCCAGCTCATCCCCCAAGGACATTCGCGCCGCCGCCCTCCAAGCGGCGTCGTTTGATCTCCCGCCGGAATCCGACCTCAATCGCTCCCCCTCCTCCTCCGCCGCCGCCGCCGCCCAGTCGCCGGAGCAGGACGACGATCCGTTCTTCGATCTCCCCGATCTGCTCCTCGATCCCAATCACCAAATCGAAACGCTCTGTTTCTCGCAGCTGCCGATCGACGCTTTAGATTCCGCTTTCGGCCGGCCGGAGGAGCAATTCTCGCCGGAATATTACGCCTACAGAACCAGCCTACTC

mRNA sequence

ATGGAAGATCCTCTCCACATATTTCAATTTCAGTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTGAGATCAAAAATTGCAGCAAAGAAATCATCAAGGGCTCCAAAAAGGTGAAACTCGGGAGCGACGGCAAGCATCCCACATATCGCGGCGTCCGAATGCGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAACCAAAGAAGAAATCGCGGATTTGGCTGGGCACATTCTCCACGCCGGAAATGGCGGCCAGAGCCCACGACGTCGCCGCCCGGACAATCAAAGGCCGCGCCGCCTTCCTCAACTTCCCGGAGCTCGCCCACCGCCTCCCCCGTCCGGCCAGCTCATCCCCCAAGGACATTCGCGCCGCCGCCCTCCAAGCGGCGTCGTTTGATCTCCCGCCGGAATCCGACCTCAATCGCTCCCCCTCCTCCTCCGCCGCCGCCGCCGCCCAGTCGCCGGAGCAGGACGACGATCCGTTCTTCGATCTCCCCGATCTGCTCCTCGATCCCAATCACCAAATCGAAACGCTCTGTTTCTCGCAGCTGCCGATCGACGCTTTAGATTCCGCTTTCGGCCGGCCGGAGGAGCAATTCTCGCCGGAATATTACGCCTACAGAACCAGCCTACTC

Coding sequence (CDS)

ATGGAAGATCCTCTCCACATATTTCAATTTCAGTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTGAGATCAAAAATTGCAGCAAAGAAATCATCAAGGGCTCCAAAAAGGTGAAACTCGGGAGCGACGGCAAGCATCCCACATATCGCGGCGTCCGAATGCGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAACCAAAGAAGAAATCGCGGATTTGGCTGGGCACATTCTCCACGCCGGAAATGGCGGCCAGAGCCCACGACGTCGCCGCCCGGACAATCAAAGGCCGCGCCGCCTTCCTCAACTTCCCGGAGCTCGCCCACCGCCTCCCCCGTCCGGCCAGCTCATCCCCCAAGGACATTCGCGCCGCCGCCCTCCAAGCGGCGTCGTTTGATCTCCCGCCGGAATCCGACCTCAATCGCTCCCCCTCCTCCTCCGCCGCCGCCGCCGCCCAGTCGCCGGAGCAGGACGACGATCCGTTCTTCGATCTCCCCGATCTGCTCCTCGATCCCAATCACCAAATCGAAACGCTCTGTTTCTCGCAGCTGCCGATCGACGCTTTAGATTCCGCTTTCGGCCGGCCGGAGGAGCAATTCTCGCCGGAATATTACGCCTACAGAACCAGCCTACTC

Protein sequence

MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIETLCFSQLPIDALDSAFGRPEEQFSPEYYAYRTSLL

Homology

[Close]

BLAST of MS012982 vs. NCBI nr
Match: XP_022158471.1 (ethylene-responsive transcription factor ERF039 [Momordica charantia])

HSP 1 Score: 404.4 bits (1038), Expect = 5.9e-109
Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLHIFQFQSQ     SSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLHIFQFQSQ-----SSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120

Query: 121 PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET 180
           PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET
Sbjct: 121 PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET 180

Query: 181 LCFSQLPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           LCFSQLPIDA DSAFGRPEEQFSPEYYAYRTSLL
Sbjct: 181 LCFSQLPIDAFDSAFGRPEEQFSPEYYAYRTSLL 209

[Close]

BLAST of MS012982 vs. NCBI nr
Match: XP_038905215.1 (ethylene-responsive transcription factor ERF039-like [Benincasa hispida])

HSP 1 Score: 283.1 bits (723), Expect = 2.0e-72
Identity = 163/227 (71.81%), Postives = 179/227 (78.85%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQ-SSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQW 60
           MEDPLH FQF SQ SSSSSSSSSSS+IKN  KE  + SKK+KL +DG HPTYRGVRMRQW
Sbjct: 1   MEDPLHRFQFHSQSSSSSSSSSSSSDIKNSIKE--RNSKKLKLVNDGTHPTYRGVRMRQW 60

Query: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASS 120
           GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAHRLPRPASS
Sbjct: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASS 120

Query: 121 SPKDIRAAALQAASF----------DLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPD 180
           SPKDIRAAA +AASF          +   +SDLN + S S+A AA+S    DDPFFDLPD
Sbjct: 121 SPKDIRAAAAKAASFTNLNLHDDEHNAAAKSDLNLNRSPSSAVAAKSSGDIDDPFFDLPD 180

Query: 181 LLL-DPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           L L DPNHQI+T CFSQ LPID  DS F RP      +Y+AYR S+L
Sbjct: 181 LFLDDPNHQIDTFCFSQFLPIDGFDSVFTRPPS--PSDYFAYRGSIL 223

[Close]

BLAST of MS012982 vs. NCBI nr
Match: XP_022965173.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 3.7e-71
Identity = 161/232 (69.40%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLH  + QS SSSSSSSSSSS+IKN  KE  K SKKVKLG+DGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLH--RVQSSSSSSSSSSSSSDIKNGVKE--KISKKVKLGNDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAH LPRPA+SS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSS 120

Query: 121 PKDIRAAALQAASFDL-------PPESDLNR----------SPSSSAAAAAQSPEQDDDP 180
           P DIRAAA +AASF +         +SDLN           S SSS++ AA+SP + DDP
Sbjct: 121 PNDIRAAAAKAASFTIDDHHHIAAAQSDLNHNRSTSSSSSSSSSSSSSVAAKSPGEIDDP 180

Query: 181 FFDLPDLLLDPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           FFDLPDL LDPNHQI T C+SQ LPI++ DS    P      EY+AYR SLL
Sbjct: 181 FFDLPDLFLDPNHQIGTFCYSQFLPIESFDSVLAPPPSPPPSEYFAYRGSLL 228

[Close]

BLAST of MS012982 vs. NCBI nr
Match: XP_023552457.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 8.3e-71
Identity = 161/233 (69.10%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLH  + QS SSSSSSSSSSS+IKN  KE  K SKKVKLG+DGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLH--RLQSSSSSSSSSSSSSDIKNGVKE--KISKKVKLGTDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAH LPRPA+SS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSS 120

Query: 121 PKDIRAAALQAASFD--------LPPESDLNR----------SPSSSAAAAAQSPEQDDD 180
           P DIRAAA +AASF            +SDLN           S SSS++ AA+SP + DD
Sbjct: 121 PNDIRAAAAKAASFTTHDHNHIIAAAQSDLNHNRSTSSSSSSSSSSSSSVAAKSPGEIDD 180

Query: 181 PFFDLPDLLLDPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           PFFDLPDL LDPNHQI T C+SQ LPI++ DS    P      EY+AYR SLL
Sbjct: 181 PFFDLPDLFLDPNHQIGTFCYSQFLPIESFDSVLAPPPSPPPSEYFAYRGSLL 229

[Close]

BLAST of MS012982 vs. NCBI nr
Match: XP_022923459.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-70
Identity = 159/224 (70.98%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLH    + QSSSSSSSSSSS+IKN  KE  K SKKVKLG+DGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLH----RLQSSSSSSSSSSSDIKNGVKE--KISKKVKLGNDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAH LPRPA+SS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSS 120

Query: 121 PKDIRAAALQAASFD--------LPPESDLNRSPS-SSAAAAAQSPEQDDDPFFDLPDLL 180
           P DIRAAA +AASF            +SDLN + S SS++ AA+SP + DDPFFDLPDL 
Sbjct: 121 PNDIRAAAAKAASFTTDDHHHIIAAAQSDLNHNRSTSSSSVAAKSPGEIDDPFFDLPDLF 180

Query: 181 LDPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           LDPNHQI T C+SQ LPI++ DS    P      EY+AYR SLL
Sbjct: 181 LDPNHQIGTFCYSQFLPIESFDSVLAPPPSPPPSEYFAYRGSLL 218

[Close]

BLAST of MS012982 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-39
Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 47  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNF 106
           KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG +A LNF
Sbjct: 41  KHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF 100

Query: 107 PELAHRLPRPASSSPKDIRAAALQAA---SFDLPPE-SDLNRSPSSSAAAAAQSPEQDDD 166
           PELA+ LPRPAS+ PKDI+AAA  AA   + D+  E S  + SP+ +  ++       DD
Sbjct: 101 PELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDD 160

Query: 167 PFFDLPDLLLDPNHQIE 180
            F DLPDLLL+ NH I+
Sbjct: 161 AFSDLPDLLLNVNHNID 177

[Close]

BLAST of MS012982 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.3e-38
Identity = 95/161 (59.01%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 17  SSSSSSSSEIKNCSKEIIKGSKKVKLGSDG--KHPTYRGVRMRQWGKWVSEIREPKKKSR 76
           SSS  S   +++   E    S K K    G  K P +RGVRMRQWGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 77  IWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDIRAAALQAASF 136
           IWLGTFSTPEMAARAHDVAA  IKG +A LNFPELA+ LPRPAS+ PKDI+ AA  AA+ 
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 137 DLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPN 176
           D        ++P S ++    SP   DD F DLPDLLLD N
Sbjct: 124 DW-------KAPESPSSTVTSSPVA-DDAFSDLPDLLLDVN 156

[Close]

BLAST of MS012982 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.1e-36
Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 20  SSSSSEIKNCSKEIIKGSKKVKLGSD-GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLG 79
           +S S  + + SK   +  KK K G D GKHP YRGVRMR WGKWVSEIREP+KKSRIWLG
Sbjct: 20  NSESDSVSDKSK-AEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 79

Query: 80  TFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDIRAAALQAASFDLPP 139
           TF TPEMAARAHDVAA +IKG AA LNFPELA   PRP S SP+DI+ AAL+AA  +  P
Sbjct: 80  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME--P 139

Query: 140 ESDLNRSPSSSAAAAAQS 157
            +  + S SSS++ ++ S
Sbjct: 140 TTSFSSSTSSSSSLSSTS 154

[Close]

BLAST of MS012982 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-34
Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 49  PTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPE 108
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTFSTPEMAARAHD AA TIKG +A LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 109 LAHRLPRPASSSPKDIRAAALQAASFDLPPES 141
           LA  LPRPASSSP+D++AAA  AA+ D  P S
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSS 132

[Close]

BLAST of MS012982 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.6e-32
Identity = 99/250 (39.60%), Postives = 126/250 (50.40%), Query Frame = 0


Query: 12  SQSSSSSSSSSSSEIKNCSKEIIK------------------GSKKVKLGSDGKHPTYRG 71
           S SSSSS++S+  E  N  ++  +                  G K+ K     KHPTYRG
Sbjct: 43  SSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRG 102

Query: 72  VRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRL 131
           VRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG  A+LNFP+LA  L
Sbjct: 103 VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGEL 162

Query: 132 PRPASSSPKDIRAAALQAA------------------------------------SFDLP 191
           PRP ++SPKDI+AAA  AA                                    S    
Sbjct: 163 PRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTT 222

Query: 192 PESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQI---ETLCF--SQLPIDALD 203
            +S      S ++ +A    + +++  FDLPDL  D N  +   +  C+  S   +   D
Sbjct: 223 TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD 282

[Close]

BLAST of MS012982 vs. ExPASy TrEMBL
Match: A0A6J1E0Z9 (ethylene-responsive transcription factor ERF039 OS=Momordica charantia OX=3673 GN=LOC111024955 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109
Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLHIFQFQSQ     SSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLHIFQFQSQ-----SSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120

Query: 121 PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET 180
           PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET
Sbjct: 121 PKDIRAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQIET 180

Query: 181 LCFSQLPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           LCFSQLPIDA DSAFGRPEEQFSPEYYAYRTSLL
Sbjct: 181 LCFSQLPIDAFDSAFGRPEEQFSPEYYAYRTSLL 209

[Close]

BLAST of MS012982 vs. ExPASy TrEMBL
Match: A0A6J1HN35 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111465108 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 161/232 (69.40%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLH  + QS SSSSSSSSSSS+IKN  KE  K SKKVKLG+DGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLH--RVQSSSSSSSSSSSSSDIKNGVKE--KISKKVKLGNDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAH LPRPA+SS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSS 120

Query: 121 PKDIRAAALQAASFDL-------PPESDLNR----------SPSSSAAAAAQSPEQDDDP 180
           P DIRAAA +AASF +         +SDLN           S SSS++ AA+SP + DDP
Sbjct: 121 PNDIRAAAAKAASFTIDDHHHIAAAQSDLNHNRSTSSSSSSSSSSSSSVAAKSPGEIDDP 180

Query: 181 FFDLPDLLLDPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           FFDLPDL LDPNHQI T C+SQ LPI++ DS    P      EY+AYR SLL
Sbjct: 181 FFDLPDLFLDPNHQIGTFCYSQFLPIESFDSVLAPPPSPPPSEYFAYRGSLL 228

[Close]

BLAST of MS012982 vs. ExPASy TrEMBL
Match: A0A6J1E6G7 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111431149 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.0e-71
Identity = 159/224 (70.98%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPLH    + QSSSSSSSSSSS+IKN  KE  K SKKVKLG+DGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLH----RLQSSSSSSSSSSSDIKNGVKE--KISKKVKLGNDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKG +A+LNFPELAH LPRPA+SS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSS 120

Query: 121 PKDIRAAALQAASFD--------LPPESDLNRSPS-SSAAAAAQSPEQDDDPFFDLPDLL 180
           P DIRAAA +AASF            +SDLN + S SS++ AA+SP + DDPFFDLPDL 
Sbjct: 121 PNDIRAAAAKAASFTTDDHHHIIAAAQSDLNHNRSTSSSSVAAKSPGEIDDPFFDLPDLF 180

Query: 181 LDPNHQIETLCFSQ-LPIDALDSAFGRPEEQFSPEYYAYRTSLL 215
           LDPNHQI T C+SQ LPI++ DS    P      EY+AYR SLL
Sbjct: 181 LDPNHQIGTFCYSQFLPIESFDSVLAPPPSPPPSEYFAYRGSLL 218

[Close]

BLAST of MS012982 vs. ExPASy TrEMBL
Match: A0A5A7TD44 (Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00450 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.2e-70
Identity = 157/221 (71.04%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPL  FQF SQ     SSSSSS+IKNC KE  K SKKVKLGSDGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLQRFQFHSQ-----SSSSSSDIKNCIKE--KTSKKVKLGSDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAA+TIKG +A+LNFPELAHRLPRPASSS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSS 120

Query: 121 PKDIRAAALQAASF----DLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLL-DPN 180
           PKDIRAAA +AA F    +   +S+LN +   S+A A +S  + DD FFDLPDL + DPN
Sbjct: 121 PKDIRAAAAKAALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPN 180

Query: 181 HQIETLCFSQ-LPIDALDSAFGRPEEQFSP-EYYAYRTSLL 215
           HQI+T CFSQ +PID  DS F RP    SP +Y+ YR SLL
Sbjct: 181 HQIDTFCFSQFVPIDGFDSVFTRPLSPSSPSDYFTYRGSLL 214

[Close]

BLAST of MS012982 vs. ExPASy TrEMBL
Match: A0A1S3BK05 (ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC103490873 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.2e-70
Identity = 157/221 (71.04%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MEDPLHIFQFQSQSSSSSSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWG 60
           MEDPL  FQF SQ     SSSSSS+IKNC KE  K SKKVKLGSDGKHPTYRGVRMRQWG
Sbjct: 1   MEDPLQRFQFHSQ-----SSSSSSDIKNCIKE--KTSKKVKLGSDGKHPTYRGVRMRQWG 60

Query: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSS 120
           KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAA+TIKG +A+LNFPELAHRLPRPASSS
Sbjct: 61  KWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSS 120

Query: 121 PKDIRAAALQAASF----DLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLL-DPN 180
           PKDIRAAA +AA F    +   +S+LN +   S+A A +S  + DD FFDLPDL + DPN
Sbjct: 121 PKDIRAAAAKAALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPN 180

Query: 181 HQIETLCFSQ-LPIDALDSAFGRPEEQFSP-EYYAYRTSLL 215
           HQI+T CFSQ +PID  DS F RP    SP +Y+ YR SLL
Sbjct: 181 HQIDTFCFSQFVPIDGFDSVFTRPLSPSSPSDYFTYRGSLL 214

[Close]

BLAST of MS012982 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 47  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNF 106
           KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG +A LNF
Sbjct: 41  KHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF 100

Query: 107 PELAHRLPRPASSSPKDIRAAALQAA---SFDLPPE-SDLNRSPSSSAAAAAQSPEQDDD 166
           PELA+ LPRPAS+ PKDI+AAA  AA   + D+  E S  + SP+ +  ++       DD
Sbjct: 101 PELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDD 160

Query: 167 PFFDLPDLLLDPNHQIE 180
            F DLPDLLL+ NH I+
Sbjct: 161 AFSDLPDLLLNVNHNID 177

[Close]

BLAST of MS012982 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-39
Identity = 95/161 (59.01%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 17  SSSSSSSSEIKNCSKEIIKGSKKVKLGSDG--KHPTYRGVRMRQWGKWVSEIREPKKKSR 76
           SSS  S   +++   E    S K K    G  K P +RGVRMRQWGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 77  IWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDIRAAALQAASF 136
           IWLGTFSTPEMAARAHDVAA  IKG +A LNFPELA+ LPRPAS+ PKDI+ AA  AA+ 
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 137 DLPPESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPN 176
           D        ++P S ++    SP   DD F DLPDLLLD N
Sbjct: 124 DW-------KAPESPSSTVTSSPVA-DDAFSDLPDLLLDVN 156

[Close]

BLAST of MS012982 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-37
Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 20  SSSSSEIKNCSKEIIKGSKKVKLGSD-GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLG 79
           +S S  + + SK   +  KK K G D GKHP YRGVRMR WGKWVSEIREP+KKSRIWLG
Sbjct: 20  NSESDSVSDKSK-AEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 79

Query: 80  TFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDIRAAALQAASFDLPP 139
           TF TPEMAARAHDVAA +IKG AA LNFPELA   PRP S SP+DI+ AAL+AA  +  P
Sbjct: 80  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME--P 139

Query: 140 ESDLNRSPSSSAAAAAQS 157
            +  + S SSS++ ++ S
Sbjct: 140 TTSFSSSTSSSSSLSSTS 154

[Close]

BLAST of MS012982 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-35
Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 49  PTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPE 108
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTFSTPEMAARAHD AA TIKG +A LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 109 LAHRLPRPASSSPKDIRAAALQAASFDLPPES 141
           LA  LPRPASSSP+D++AAA  AA+ D  P S
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSS 132

[Close]

BLAST of MS012982 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-33
Identity = 99/250 (39.60%), Postives = 126/250 (50.40%), Query Frame = 0


Query: 12  SQSSSSSSSSSSSEIKNCSKEIIK------------------GSKKVKLGSDGKHPTYRG 71
           S SSSSS++S+  E  N  ++  +                  G K+ K     KHPTYRG
Sbjct: 43  SSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRG 102

Query: 72  VRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRL 131
           VRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG  A+LNFP+LA  L
Sbjct: 103 VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGEL 162

Query: 132 PRPASSSPKDIRAAALQAA------------------------------------SFDLP 191
           PRP ++SPKDI+AAA  AA                                    S    
Sbjct: 163 PRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTT 222

Query: 192 PESDLNRSPSSSAAAAAQSPEQDDDPFFDLPDLLLDPNHQI---ETLCF--SQLPIDALD 203
            +S      S ++ +A    + +++  FDLPDL  D N  +   +  C+  S   +   D
Sbjct: 223 TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD 282

The following BLAST results are available for this feature:

BLAST of MS012982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158471.1	5.9e-109	97.20	ethylene-responsive transcription factor ERF039 [Momordica charantia]	[more]
XP_038905215.1	2.0e-72	71.81	ethylene-responsive transcription factor ERF039-like [Benincasa hispida]	[more]
XP_022965173.1	3.7e-71	69.40	ethylene-responsive transcription factor ERF039-like [Cucurbita maxima]	[more]
XP_023552457.1	8.3e-71	69.10	ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo...	[more]
XP_022923459.1	1.9e-70	70.98	ethylene-responsive transcription factor ERF039-like [Cucurbita moschata]	[more]

BLAST of MS012982 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQP3	3.0e-39	64.96	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SUK8	3.3e-38	59.01	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	9.1e-36	61.59	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
O80654	3.8e-34	78.26	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	3.6e-32	39.60	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MS012982 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0Z9	2.9e-109	97.20	ethylene-responsive transcription factor ERF039 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HN35	1.8e-71	69.40	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E6G7	9.0e-71	70.98	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A5A7TD44	1.2e-70	71.04	Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BK05	1.2e-70	71.04	ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS012982 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35700.1	2.1e-40	64.96	ERF family protein 38	[more]
AT4G16750.1	2.4e-39	59.01	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	6.4e-37	61.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	2.7e-35	78.26	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	2.5e-33	39.60	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 51..62 score: 70.15 coord: 73..89 score: 66.2
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..113 e-value: 4.2E-36 score: 135.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 50..99 e-value: 1.1E-12 score: 48.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 50..107 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 51..109 e-value: 1.33083E-31 score: 107.743
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 50..108 e-value: 2.1E-24 score: 87.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..165
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 14..185
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 14..185
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 50..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012982.1	MS012982.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity