MS012869 (gene) Bitter gourd (TR) v1

Overview
NameMS012869
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold63: 4128998 .. 4130539 (-)
RNA-Seq ExpressionMS012869
SyntenyMS012869
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGAAGTGATGTCTCAAGGTGTTTGTCCGGATGTTTTCTTGTTTACCAATGCAATAAATGCCTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAATTATTCATGAAAATGGAGAAGTTGGATATTTCTCCGAATGTTGTTACTTATAATAGTATTATTCACGGCTTATGCCAGAACGGGAGATTGGACGATGCGTTTGAGTTCAAGGAGAAGATGACAATAGAAGGGGTAAAGCCAAGTCTTATAACTTACAGTGTGCTTATTAATGGTTTGACAAAGCTGGAAAAATTTGACAAGGCAATGCATGTTTTAAACAAAATGATTGATGCAGGTTTTGTTCCGAATGCAGTTGTGTACAATACTTTAATTGATGGATACTGCAAAATGGGCAATATAAATGAAGCACTTAGGATTAGAGATGTGATGATATCCAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTGATCAAATCAAGCAAGCGGAGAATGCTCTAGACGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTTTTCGGTTATTCATTGGTTATGTACTAAGTCTAGGTTCCATTCTGCATTGCAATTTACCATGAAGATGCTATCGAGGAACTTCAGGCCTAGTGATCAGTTGTTGACCATATTAGTATGTGGGCTCTGTAAGGATGGAAAACATTCTGAAGCAACTGAACTTTGGTTTAGGCTATTGGAGAAAGGGTCTCCAGCGAGTACGGCGACCTCTAATGCTCTAATGCATGGACTTTGTGGAGAAGGTAACATGCAAGGGGCTGTCCGGATACTCAAGGAGATGTTGGATAGGGGTTTTCCATTGGATCAGATCACGTACAACACGCTTATCTTAGGTTGTTGCAAGGAGGGAAAAGTTGAGGAATGCTTTAGATTTAAAGATGAGATGACTAAGCAAGGAATTGAACCAGACATCTATACTTGTAATTTCCTATTGCATGGACTGTGCAATGCAGGAAAATTGGATGATGCTATTAAGCTTTGGGATGAATTCAAAGCTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTATTGATGGATGGACACTGTAAAGCTAACAGAATGGAAGATGTTAAAAAATTATTCAATGAGTTGGTCACTAAGAAAATGGAGCCGAATACCATTGTTTATAATATATTAATCAGAGCATACTGTCATAATGGAAACATCGTTGCAGCTTTTCAACTTCGTGATGAAATGAAAGGTAAGGGAATTTTCCCAACTTGTGCCACATATTCTTCTCTAATACACGGGATGTGCAACATTGGCCGTGTTGAAGATGCAAAACATCTTATGGATGAAATGAGAGGGGAGGGATTGTTGCCGAACGTTGTTTGTTATACTGCATTAATTGGTGGTTATTGCAAGCTGGGACAAATGGATATAGCTGAAGCTACCTTGCTCGAGATGACCTCTTTTAAAATTAAGCCAAATAAATTTACCTACACCGTCATGATTGATGGGTACTGTAAA

mRNA sequence

TTCGAAGTGATGTCTCAAGGTGTTTGTCCGGATGTTTTCTTGTTTACCAATGCAATAAATGCCTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAATTATTCATGAAAATGGAGAAGTTGGATATTTCTCCGAATGTTGTTACTTATAATAGTATTATTCACGGCTTATGCCAGAACGGGAGATTGGACGATGCGTTTGAGTTCAAGGAGAAGATGACAATAGAAGGGGTAAAGCCAAGTCTTATAACTTACAGTGTGCTTATTAATGGTTTGACAAAGCTGGAAAAATTTGACAAGGCAATGCATGTTTTAAACAAAATGATTGATGCAGGTTTTGTTCCGAATGCAGTTGTGTACAATACTTTAATTGATGGATACTGCAAAATGGGCAATATAAATGAAGCACTTAGGATTAGAGATGTGATGATATCCAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTGATCAAATCAAGCAAGCGGAGAATGCTCTAGACGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTTTTCGGTTATTCATTGGTTATGTACTAAGTCTAGGTTCCATTCTGCATTGCAATTTACCATGAAGATGCTATCGAGGAACTTCAGGCCTAGTGATCAGTTGTTGACCATATTAGTATGTGGGCTCTGTAAGGATGGAAAACATTCTGAAGCAACTGAACTTTGGTTTAGGCTATTGGAGAAAGGGTCTCCAGCGAGTACGGCGACCTCTAATGCTCTAATGCATGGACTTTGTGGAGAAGGTAACATGCAAGGGGCTGTCCGGATACTCAAGGAGATGTTGGATAGGGGTTTTCCATTGGATCAGATCACGTACAACACGCTTATCTTAGGTTGTTGCAAGGAGGGAAAAGTTGAGGAATGCTTTAGATTTAAAGATGAGATGACTAAGCAAGGAATTGAACCAGACATCTATACTTGTAATTTCCTATTGCATGGACTGTGCAATGCAGGAAAATTGGATGATGCTATTAAGCTTTGGGATGAATTCAAAGCTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTATTGATGGATGGACACTGTAAAGCTAACAGAATGGAAGATGTTAAAAAATTATTCAATGAGTTGGTCACTAAGAAAATGGAGCCGAATACCATTGTTTATAATATATTAATCAGAGCATACTGTCATAATGGAAACATCGTTGCAGCTTTTCAACTTCGTGATGAAATGAAAGGTAAGGGAATTTTCCCAACTTGTGCCACATATTCTTCTCTAATACACGGGATGTGCAACATTGGCCGTGTTGAAGATGCAAAACATCTTATGGATGAAATGAGAGGGGAGGGATTGTTGCCGAACGTTGTTTGTTATACTGCATTAATTGGTGGTTATTGCAAGCTGGGACAAATGGATATAGCTGAAGCTACCTTGCTCGAGATGACCTCTTTTAAAATTAAGCCAAATAAATTTACCTACACCGTCATGATTGATGGGTACTGTAAA

Coding sequence (CDS)

TTCGAAGTGATGTCTCAAGGTGTTTGTCCGGATGTTTTCTTGTTTACCAATGCAATAAATGCCTTGTGCAAGGGAGGGAAGATGGAAAATGCCATTGAATTATTCATGAAAATGGAGAAGTTGGATATTTCTCCGAATGTTGTTACTTATAATAGTATTATTCACGGCTTATGCCAGAACGGGAGATTGGACGATGCGTTTGAGTTCAAGGAGAAGATGACAATAGAAGGGGTAAAGCCAAGTCTTATAACTTACAGTGTGCTTATTAATGGTTTGACAAAGCTGGAAAAATTTGACAAGGCAATGCATGTTTTAAACAAAATGATTGATGCAGGTTTTGTTCCGAATGCAGTTGTGTACAATACTTTAATTGATGGATACTGCAAAATGGGCAATATAAATGAAGCACTTAGGATTAGAGATGTGATGATATCCAAAAATATAACTCCTACTTCAGTTACTTTATATACTCTCATGCAAGGGTTTTGCAAGAGTGATCAAATCAAGCAAGCGGAGAATGCTCTAGACGAGATATTATCACAAGGGCTATCTATAAACCCTGTTACTTGTTTTTCGGTTATTCATTGGTTATGTACTAAGTCTAGGTTCCATTCTGCATTGCAATTTACCATGAAGATGCTATCGAGGAACTTCAGGCCTAGTGATCAGTTGTTGACCATATTAGTATGTGGGCTCTGTAAGGATGGAAAACATTCTGAAGCAACTGAACTTTGGTTTAGGCTATTGGAGAAAGGGTCTCCAGCGAGTACGGCGACCTCTAATGCTCTAATGCATGGACTTTGTGGAGAAGGTAACATGCAAGGGGCTGTCCGGATACTCAAGGAGATGTTGGATAGGGGTTTTCCATTGGATCAGATCACGTACAACACGCTTATCTTAGGTTGTTGCAAGGAGGGAAAAGTTGAGGAATGCTTTAGATTTAAAGATGAGATGACTAAGCAAGGAATTGAACCAGACATCTATACTTGTAATTTCCTATTGCATGGACTGTGCAATGCAGGAAAATTGGATGATGCTATTAAGCTTTGGGATGAATTCAAAGCTAGTGGATTGGTTTCTAATGTTCACACTTATGGGGTATTGATGGATGGACACTGTAAAGCTAACAGAATGGAAGATGTTAAAAAATTATTCAATGAGTTGGTCACTAAGAAAATGGAGCCGAATACCATTGTTTATAATATATTAATCAGAGCATACTGTCATAATGGAAACATCGTTGCAGCTTTTCAACTTCGTGATGAAATGAAAGGTAAGGGAATTTTCCCAACTTGTGCCACATATTCTTCTCTAATACACGGGATGTGCAACATTGGCCGTGTTGAAGATGCAAAACATCTTATGGATGAAATGAGAGGGGAGGGATTGTTGCCGAACGTTGTTTGTTATACTGCATTAATTGGTGGTTATTGCAAGCTGGGACAAATGGATATAGCTGAAGCTACCTTGCTCGAGATGACCTCTTTTAAAATTAAGCCAAATAAATTTACCTACACCGTCATGATTGATGGGTACTGTAAA

Protein sequence

FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK
Homology
BLAST of MS012869 vs. NCBI nr
Match: XP_022136653.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic, partial [Momordica charantia])

HSP 1 Score: 1067.4 bits (2759), Expect = 3.9e-308
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN
Sbjct: 228 FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 287

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY
Sbjct: 288 GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 347

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS
Sbjct: 348 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 407

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE
Sbjct: 408 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 467

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL
Sbjct: 468 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 527

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS
Sbjct: 528 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 587

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR
Sbjct: 588 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 647

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL
Sbjct: 648 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 707

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK
Sbjct: 708 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 741

BLAST of MS012869 vs. NCBI nr
Match: XP_023552294.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023552295.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023552296.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 943.7 bits (2438), Expect = 6.5e-271
Identity = 450/514 (87.55%), Postives = 479/514 (93.19%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNSIIHGLCQN
Sbjct: 232 FEVMSQGVSPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+DAGFVPNAVVY
Sbjct: 292 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVTLYTL+QGFCK++QI+QAEN L+EILS
Sbjct: 352 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKNNQIEQAENTLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTKSRFH AL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 412 QGFPINPVTCYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLE 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCN LL+GLCNAGKLDDAIKLWDEFKASGL+S
Sbjct: 532 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWDEFKASGLIS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLFNELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 592 NVHTYGVMMDVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIGRVEDAKHL+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGIFPTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTSF I+PNK TYTVMIDGYCK
Sbjct: 712 GQMDIAEATWLEMTSFNIRPNKITYTVMIDGYCK 745

BLAST of MS012869 vs. NCBI nr
Match: KAG7015117.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 934.5 bits (2414), Expect = 3.9e-268
Identity = 447/514 (86.96%), Postives = 475/514 (92.41%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNSIIHGLCQN
Sbjct: 211 FEVMSQGVRPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQN 270

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+D GFVPNAVVY
Sbjct: 271 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDVGFVPNAVVY 330

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVTLYTL+QGFCKS+QI+QAEN L+EILS
Sbjct: 331 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILS 390

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTKSRFH AL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 391 QGFPINPVTCYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLE 450

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNTLIL
Sbjct: 451 ATELWFRLLEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLIL 510

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCN LL+GLCNAGKLDDAIKLWDEFKASGL+S
Sbjct: 511 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWDEFKASGLIS 570

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLFNELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 571 NVHTYGVMMDVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 630

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIG VEDAK L+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 631 DDMKSKGIFPTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKL 690

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTS  I+PNK TYTVMIDGYCK
Sbjct: 691 GQMDIAEATWLEMTSLNIRPNKITYTVMIDGYCK 724

BLAST of MS012869 vs. NCBI nr
Match: XP_022984601.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita maxima] >XP_022984602.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita maxima] >XP_022984603.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 934.5 bits (2414), Expect = 3.9e-268
Identity = 445/514 (86.58%), Postives = 474/514 (92.22%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNS+IHGLCQN
Sbjct: 232 FEVMSQGVRPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSVIHGLCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+DAGFVPNAVVY
Sbjct: 292 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVT YTL+QGFCKS+QI+QA+N L+EILS
Sbjct: 352 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTFYTLLQGFCKSNQIEQAQNTLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTK RFH AL+FT  ML +NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 412 QGFPINPVTCYSVIHWLCTKFRFHYALRFTTVMLLKNFRPSDQLLTILVCGLCKDGKHLE 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCNFLL+GLCNAGKLDDAIKLWDEFKASGL+S
Sbjct: 532 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNFLLYGLCNAGKLDDAIKLWDEFKASGLIS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLFNELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 592 NVHTYGVMMDAYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIGRVEDAKHL+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGIFPTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTS  I PNK TYTVMIDGYCK
Sbjct: 712 GQMDIAEATWLEMTSLNISPNKITYTVMIDGYCK 745

BLAST of MS012869 vs. NCBI nr
Match: KAG6577115.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 932.6 bits (2409), Expect = 1.5e-267
Identity = 446/514 (86.77%), Postives = 475/514 (92.41%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNSIIHGLCQN
Sbjct: 232 FEVMSQGVRPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+D GFVPNAVVY
Sbjct: 292 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDVGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVTLYTL+QGFCKS+QI+QAEN L+EILS
Sbjct: 352 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTKSRFH AL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 412 QGFPINPVTCYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLE 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCN LL+GLCNAGKLDDAIKLWDEFKASGL+S
Sbjct: 532 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWDEFKASGLIS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLF+ELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 592 NVHTYGVMMDVYCKANRMEDVEKLFDELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIG VEDAK L+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGIFPTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTS  I+PNK TYTVMIDGYCK
Sbjct: 712 GQMDIAEATWLEMTSLNIRPNKITYTVMIDGYCK 745

BLAST of MS012869 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 561.2 bits (1445), Expect = 1.2e-158
Identity = 270/514 (52.53%), Postives = 366/514 (71.21%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           F+V+ +GV PDV+LFT AINA CKGGK+E A++LF KME+  ++PNVVT+N++I GL   
Sbjct: 262 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 321

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GR D+AF FKEKM   G++P+LITYS+L+ GLT+ ++   A  VL +M   GF PN +VY
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           N LID + + G++N+A+ I+D+M+SK ++ TS T  TL++G+CK+ Q   AE  L E+LS
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
            G ++N  +  SVI  LC+   F SAL+F  +ML RN  P   LLT L+ GLCK GKHS+
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           A ELWF+ L KG    T TSNAL+HGLC  G +  A RI KE+L RG  +D+++YNTLI 
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCC + K++E F F DEM K+G++PD YT + L+ GL N  K+++AI+ WD+ K +G++ 
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           +V+TY V++DG CKA R E+ ++ F+E+++K ++PNT+VYN LIRAYC +G +  A +LR
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           ++MK KGI P  ATY+SLI GM  I RVE+AK L +EMR EGL PNV  YTALI GY KL
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQM   E  L EM S  + PNK TYTVMI GY +
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 775

BLAST of MS012869 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.6e-78
Identity = 149/488 (30.53%), Postives = 259/488 (53.07%), Query Frame = 0

Query: 27  KMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKMTIEGVKPSLITYS 86
           K+ +AI+LF  M +    P  + +N +   + +  + D    F + M + G++  + T +
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 87  VLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNINEALRIRDVMISK 146
           ++IN   + +K   A  VL +    G+ P+ + ++TL++G+C  G ++EA+ + D M+  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 147 NITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVIHWLCTKSRFHSA 206
              P  VT+ TL+ G C   ++ +A   +D ++  G   + VT   V++ LC       A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 207 LQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSPASTATSNALMHG 266
           L    KM  RN + S    +I++  LCKDG   +A  L+  +  KG  A   T ++L+ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 267 LCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRFKDEMTKQGIEPD 326
           LC +G      ++L+EM+ R    D +T++ LI    KEGK+ E     +EM  +GI PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 327 IYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCKANRMEDVKKLFN 386
             T N L+ G C    L +A +++D   + G   ++ TY +L++ +CKA R++D  +LF 
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 387 ELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCATYSSLIHGMCNIG 446
           E+ +K + PNTI YN L+  +C +G + AA +L  EM  +G+ P+  TY  L+ G+C+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 447 RVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEMTSFKIKPNKFTYT 506
            +  A  + ++M+   +   +  Y  +I G C   ++D A +    ++   +KP+  TY 
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 507 VMIDGYCK 515
           VMI G CK
Sbjct: 530 VMIGGLCK 537

BLAST of MS012869 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.5e-76
Identity = 152/504 (30.16%), Postives = 256/504 (50.79%), Query Frame = 0

Query: 6   QGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDD 65
           +G+  +++  +  IN  C+  K+  A     K+ KL   PN +T++++I+GLC  GR+ +
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176

Query: 66  AFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLID 125
           A E  ++M   G KP LIT + L+NGL    K  +AM +++KM++ G  PNAV Y  +++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236

Query: 126 GYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSI 185
             CK G    A+ +   M  +NI   +V    ++ G CK   +  A N  +E+  +G++ 
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296

Query: 186 NPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELW 245
           N +T   +I   C   R+    +    M+ R   P+    ++L+    K+GK  EA EL 
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356

Query: 246 FRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKE 305
                                              KEM+ RG   D ITY +LI G CKE
Sbjct: 357 -----------------------------------KEMIHRGIAPDTITYTSLIDGFCKE 416

Query: 306 GKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTY 365
             +++  +  D M  +G +P+I T N L++G C A ++DD ++L+ +    G+V++  TY
Sbjct: 417 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 476

Query: 366 GVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKG 425
             L+ G C+  ++   K+LF E+V++K+ PN + Y IL+   C NG    A ++ ++++ 
Sbjct: 477 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 536

Query: 426 KGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDI 485
             +      Y+ +IHGMCN  +V+DA  L   +  +G+ P V  Y  +IGG CK G +  
Sbjct: 537 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 585

Query: 486 AEATLLEMTSFKIKPNKFTYTVMI 510
           AE    +M      P+ +TY ++I
Sbjct: 597 AELLFRKMEEDGHAPDGWTYNILI 585

BLAST of MS012869 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 1.9e-76
Identity = 149/494 (30.16%), Postives = 258/494 (52.23%), Query Frame = 0

Query: 2   EVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNG 61
           ++ + G+  + + ++  IN  C+  ++  A+ +  KM KL   PN+VT +S+++G C + 
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165

Query: 62  RLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYN 121
           R+ +A    ++M + G +P+ +T++ LI+GL    K  +AM ++++M+  G  P+ V Y 
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225

Query: 122 TLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQ 181
            +++G CK G+ + A  + + M    + P  +   T++ G CK   +  A N   E+ ++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285

Query: 182 GLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEA 241
           G+  N VT  S+I  LC   R+  A +    M+ R   P     + L+    K+GK  EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345

Query: 242 TELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILG 301
            +L+  ++++    S  T ++L++G C    +  A ++ + M+ +    D +TYNTLI G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405

Query: 302 CCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSN 361
            CK  +VEE      EM+++G+  +  T N L+ GL  AG  D A +++ E  + G+  N
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 362 VHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRD 421
           + TY  L+DG CK  ++E    +F  L   KMEP    YNI+I   C  G +   + L  
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 422 EMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLG 481
            +  KG+ P    Y+++I G C  G  E+A  L  EM+ +G LPN  CY  LI    + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 482 QMDIAEATLLEMTS 496
             + +   + EM S
Sbjct: 586 DREASAELIKEMRS 599

BLAST of MS012869 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 287.7 bits (735), Expect = 2.5e-76
Identity = 168/549 (30.60%), Postives = 252/549 (45.90%), Query Frame = 0

Query: 2   EVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNG 61
           E++ + +CPDV  F   IN LC  G  E +  L  KMEK   +P +VTYN+++H  C+ G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 62  RLDDAFEFKEKMTIEGV-----------------------------------KPSLITYS 121
           R   A E  + M  +GV                                    P+ +TY+
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 122 VLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNINEALRIRDVMISK 181
            LING +   K   A  +LN+M+  G  PN V +N LIDG+   GN  EAL++  +M +K
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362

Query: 182 NITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVIHWLCTKSRFHSA 241
            +TP+ V+   L+ G CK+ +   A      +   G+ +  +T   +I  LC       A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422

Query: 242 LQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSPASTATSNALMHG 301
           +    +M      P     + L+ G CK G+   A E+  R+   G   +    + L++ 
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482

Query: 302 LCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRFKDEMTKQGIEPD 361
            C  G ++ A+RI + M+  G   D  T+N L+   CK GKV E   F   MT  GI P+
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542

Query: 362 IYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCKANRMEDVKKLFN 421
             + + L++G  N+G+   A  ++DE    G      TYG L+ G CK   + + +K   
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602

Query: 422 ELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCATYSSLIHGMCNIG 481
            L       +T++YN L+ A C +GN+  A  L  EM  + I P   TY+SLI G+C  G
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662

Query: 482 RVEDAKHLMDEMRGEG-LLPNVVCYTALIGGYCKLGQMDIAEATLLEMTSFKIKPNKFTY 515
           +   A     E    G +LPN V YT  + G  K GQ         +M +    P+  T 
Sbjct: 663 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 722

BLAST of MS012869 vs. ExPASy TrEMBL
Match: A0A6J1C854 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008305 PE=4 SV=1)

HSP 1 Score: 1067.4 bits (2759), Expect = 1.9e-308
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN
Sbjct: 228 FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 287

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY
Sbjct: 288 GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 347

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS
Sbjct: 348 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 407

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE
Sbjct: 408 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 467

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL
Sbjct: 468 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 527

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS
Sbjct: 528 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 587

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR
Sbjct: 588 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 647

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL
Sbjct: 648 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 707

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK
Sbjct: 708 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 741

BLAST of MS012869 vs. ExPASy TrEMBL
Match: A0A6J1J2L6 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482844 PE=4 SV=1)

HSP 1 Score: 934.5 bits (2414), Expect = 1.9e-268
Identity = 445/514 (86.58%), Postives = 474/514 (92.22%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNS+IHGLCQN
Sbjct: 232 FEVMSQGVRPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSVIHGLCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+DAGFVPNAVVY
Sbjct: 292 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVT YTL+QGFCKS+QI+QA+N L+EILS
Sbjct: 352 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTFYTLLQGFCKSNQIEQAQNTLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTK RFH AL+FT  ML +NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 412 QGFPINPVTCYSVIHWLCTKFRFHYALRFTTVMLLKNFRPSDQLLTILVCGLCKDGKHLE 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCNFLL+GLCNAGKLDDAIKLWDEFKASGL+S
Sbjct: 532 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNFLLYGLCNAGKLDDAIKLWDEFKASGLIS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLFNELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 592 NVHTYGVMMDAYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIGRVEDAKHL+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGIFPTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTS  I PNK TYTVMIDGYCK
Sbjct: 712 GQMDIAEATWLEMTSLNISPNKITYTVMIDGYCK 745

BLAST of MS012869 vs. ExPASy TrEMBL
Match: A0A6J1ETG9 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111437580 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 444/514 (86.38%), Postives = 472/514 (91.83%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMSQGV PDVFLFTN INALCKGGKMENA+EL M MEKL ISPNVVTYNSIIHGLCQN
Sbjct: 232 FEVMSQGVRPDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRL DAFE KEKMTIEGVKPSLITYSVLINGLTKLEKFDKA  VLN+M+ AGFVPNAVVY
Sbjct: 292 GRLGDAFELKEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVGAGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMG INEAL+IRDVM+SKNITPTSVTLYTL+QGFCKS+QI+QAEN L+EILS
Sbjct: 352 NTLIDGYCKMGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QG  INPVTC+SVIHWLCTKSRFH AL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH E
Sbjct: 412 QGFPINPVTCYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLE 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRL EKGSPASTATSNAL+HGLCG G M  AVRILKEML+RGF LD+ITYNT IL
Sbjct: 472 ATELWFRLFEKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTFIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCCKEGKVEECFR K+EMT QGI+PDIYTCN LL+GLCNAGKLDDAIKLW EFKASGL+S
Sbjct: 532 GCCKEGKVEECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWGEFKASGLIS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NVHTYGV+MD +CKANRMEDV+KLFNELVTKKME N+IVYNI IRA+C NGN+ AA QLR
Sbjct: 592 NVHTYGVMMDVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KGIFPTCATYSSLIHGMCNIG VEDAK L+DEMR EGLLPNVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGIFPTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQMDIAEAT LEMTS  I+PNK TYTVMIDGYCK
Sbjct: 712 GQMDIAEATFLEMTSLNIRPNKITYTVMIDGYCK 745

BLAST of MS012869 vs. ExPASy TrEMBL
Match: A0A6J1FWH7 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447546 PE=4 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 4.1e-263
Identity = 438/514 (85.21%), Postives = 477/514 (92.80%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMS+GV PDVFLFTN INALCKGGKMENAIELF+KMEK  ISPNVVTYNSIIHG CQN
Sbjct: 232 FEVMSRGVRPDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRLDDAF+ KEKM IEGVKPSLITYSVLINGLTKLE FDKA HVLN+M+D GFVPNAVVY
Sbjct: 292 GRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMVDTGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMGNINEAL+IRDVMISKNIT TSVTLY+LM GFCKS+QI++AEN+L+EILS
Sbjct: 352 NTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QGLSIN VTC+SVIHWLCTKSRF SAL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH +
Sbjct: 412 QGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLD 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG GN+Q AVRILKEML+RGFP D+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPSDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           G CK GKVEECF   DEM K GIEPDIYTCN LLHGLCNAG LD AIKLWDEFKA+GLVS
Sbjct: 532 GYCKAGKVEECFTLIDEMIKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NV+TYGV+MDG+CKANRMEDV++LFNE+VTKKME +TIVYNILIRA CH+GN+VAA Q+R
Sbjct: 592 NVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVR 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KG+FPTC+TYSSLIHGMCN+GRVE+AK L+DEMRGEGLL NVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           G+MDIAEATLLEM SF I+PNKFTYTVMIDGYCK
Sbjct: 712 GRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCK 745

BLAST of MS012869 vs. ExPASy TrEMBL
Match: A0A6J1ISC0 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478853 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 5.0e-261
Identity = 437/514 (85.02%), Postives = 476/514 (92.61%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           FEVMS+GV PDVFLFTN INALCKGGKMENAIELF+KMEK  ISPNVVTYNSIIHG CQN
Sbjct: 232 FEVMSRGVRPDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQN 291

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GRLDDAF+ KEKM IEGVKPSLITYSVLINGLTKLEKFD+A HVLN+M+D GFVPNAVVY
Sbjct: 292 GRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVY 351

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           NTLIDGYCKMGNINEAL+IRDVMISKNIT TSVTLY+LM GFCKS+QIK AEN+L+EILS
Sbjct: 352 NTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIKLAENSLEEILS 411

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
           QGLSIN VTC+SVIHWLCTKSRF SAL+FTM MLS+NFR SDQLLTILVCGLCKDGKH +
Sbjct: 412 QGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRLSDQLLTILVCGLCKDGKHLD 471

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           ATELWFRLLEKGSPASTATSNAL+HGLCG GN+Q AVRILKEML+RGFPLD+ITYNTLIL
Sbjct: 472 ATELWFRLLEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLIL 531

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           G CK GKVEECFR KD+MTK GIE DIYTCNFLLHGLCNAGKLD AIKLWDEFKA+GLVS
Sbjct: 532 GYCKAGKVEECFRLKDKMTKLGIETDIYTCNFLLHGLCNAGKLDGAIKLWDEFKANGLVS 591

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           NV+TYGV+MDG+CKA RMEDV++LFNE+VTKKME +TIVYNILIRA CH+GN+VAA +  
Sbjct: 592 NVYTYGVMMDGYCKAKRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALRFC 651

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           D+MK KG+FPTC+TYSSLIHGMCN+GRVE+AK L+DEMR EGLL NVVCYTALIGGYCKL
Sbjct: 652 DDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMREEGLLTNVVCYTALIGGYCKL 711

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           G+MDIAEATL EM SF I+PNKFTYTVMIDGYCK
Sbjct: 712 GRMDIAEATLHEMISFNIRPNKFTYTVMIDGYCK 745

BLAST of MS012869 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 8.5e-160
Identity = 270/514 (52.53%), Postives = 366/514 (71.21%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           F+V+ +GV PDV+LFT AINA CKGGK+E A++LF KME+  ++PNVVT+N++I GL   
Sbjct: 249 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GR D+AF FKEKM   G++P+LITYS+L+ GLT+ ++   A  VL +M   GF PN +VY
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           N LID + + G++N+A+ I+D+M+SK ++ TS T  TL++G+CK+ Q   AE  L E+LS
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
            G ++N  +  SVI  LC+   F SAL+F  +ML RN  P   LLT L+ GLCK GKHS+
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           A ELWF+ L KG    T TSNAL+HGLC  G +  A RI KE+L RG  +D+++YNTLI 
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCC + K++E F F DEM K+G++PD YT + L+ GL N  K+++AI+ WD+ K +G++ 
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           +V+TY V++DG CKA R E+ ++ F+E+++K ++PNT+VYN LIRAYC +G +  A +LR
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           ++MK KGI P  ATY+SLI GM  I RVE+AK L +EMR EGL PNV  YTALI GY KL
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQM   E  L EM S  + PNK TYTVMI GY +
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762

BLAST of MS012869 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 8.5e-160
Identity = 270/514 (52.53%), Postives = 366/514 (71.21%), Query Frame = 0

Query: 1   FEVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQN 60
           F+V+ +GV PDV+LFT AINA CKGGK+E A++LF KME+  ++PNVVT+N++I GL   
Sbjct: 249 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308

Query: 61  GRLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVY 120
           GR D+AF FKEKM   G++P+LITYS+L+ GLT+ ++   A  VL +M   GF PN +VY
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 121 NTLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILS 180
           N LID + + G++N+A+ I+D+M+SK ++ TS T  TL++G+CK+ Q   AE  L E+LS
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 181 QGLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSE 240
            G ++N  +  SVI  LC+   F SAL+F  +ML RN  P   LLT L+ GLCK GKHS+
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488

Query: 241 ATELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLIL 300
           A ELWF+ L KG    T TSNAL+HGLC  G +  A RI KE+L RG  +D+++YNTLI 
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548

Query: 301 GCCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVS 360
           GCC + K++E F F DEM K+G++PD YT + L+ GL N  K+++AI+ WD+ K +G++ 
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608

Query: 361 NVHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLR 420
           +V+TY V++DG CKA R E+ ++ F+E+++K ++PNT+VYN LIRAYC +G +  A +LR
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 421 DEMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKL 480
           ++MK KGI P  ATY+SLI GM  I RVE+AK L +EMR EGL PNV  YTALI GY KL
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728

Query: 481 GQMDIAEATLLEMTSFKIKPNKFTYTVMIDGYCK 515
           GQM   E  L EM S  + PNK TYTVMI GY +
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762

BLAST of MS012869 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 293.5 bits (750), Expect = 3.3e-79
Identity = 149/488 (30.53%), Postives = 259/488 (53.07%), Query Frame = 0

Query: 27  KMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKMTIEGVKPSLITYS 86
           K+ +AI+LF  M +    P  + +N +   + +  + D    F + M + G++  + T +
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 87  VLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNINEALRIRDVMISK 146
           ++IN   + +K   A  VL +    G+ P+ + ++TL++G+C  G ++EA+ + D M+  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 147 NITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSVIHWLCTKSRFHSA 206
              P  VT+ TL+ G C   ++ +A   +D ++  G   + VT   V++ LC       A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 207 LQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGSPASTATSNALMHG 266
           L    KM  RN + S    +I++  LCKDG   +A  L+  +  KG  A   T ++L+ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 267 LCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFRFKDEMTKQGIEPD 326
           LC +G      ++L+EM+ R    D +T++ LI    KEGK+ E     +EM  +GI PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 327 IYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHCKANRMEDVKKLFN 386
             T N L+ G C    L +A +++D   + G   ++ TY +L++ +CKA R++D  +LF 
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 387 ELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCATYSSLIHGMCNIG 446
           E+ +K + PNTI YN L+  +C +G + AA +L  EM  +G+ P+  TY  L+ G+C+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 447 RVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEMTSFKIKPNKFTYT 506
            +  A  + ++M+   +   +  Y  +I G C   ++D A +    ++   +KP+  TY 
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 507 VMIDGYCK 515
           VMI G CK
Sbjct: 530 VMIGGLCK 537

BLAST of MS012869 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-77
Identity = 152/504 (30.16%), Postives = 256/504 (50.79%), Query Frame = 0

Query: 6   QGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDD 65
           +G+  +++  +  IN  C+  K+  A     K+ KL   PN +T++++I+GLC  GR+ +
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176

Query: 66  AFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLID 125
           A E  ++M   G KP LIT + L+NGL    K  +AM +++KM++ G  PNAV Y  +++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236

Query: 126 GYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSI 185
             CK G    A+ +   M  +NI   +V    ++ G CK   +  A N  +E+  +G++ 
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296

Query: 186 NPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELW 245
           N +T   +I   C   R+    +    M+ R   P+    ++L+    K+GK  EA EL 
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356

Query: 246 FRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKE 305
                                              KEM+ RG   D ITY +LI G CKE
Sbjct: 357 -----------------------------------KEMIHRGIAPDTITYTSLIDGFCKE 416

Query: 306 GKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTY 365
             +++  +  D M  +G +P+I T N L++G C A ++DD ++L+ +    G+V++  TY
Sbjct: 417 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 476

Query: 366 GVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKG 425
             L+ G C+  ++   K+LF E+V++K+ PN + Y IL+   C NG    A ++ ++++ 
Sbjct: 477 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 536

Query: 426 KGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDI 485
             +      Y+ +IHGMCN  +V+DA  L   +  +G+ P V  Y  +IGG CK G +  
Sbjct: 537 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 585

Query: 486 AEATLLEMTSFKIKPNKFTYTVMI 510
           AE    +M      P+ +TY ++I
Sbjct: 597 AELLFRKMEEDGHAPDGWTYNILI 585

BLAST of MS012869 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-77
Identity = 149/494 (30.16%), Postives = 258/494 (52.23%), Query Frame = 0

Query: 2   EVMSQGVCPDVFLFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNG 61
           ++ + G+  + + ++  IN  C+  ++  A+ +  KM KL   PN+VT +S+++G C + 
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165

Query: 62  RLDDAFEFKEKMTIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYN 121
           R+ +A    ++M + G +P+ +T++ LI+GL    K  +AM ++++M+  G  P+ V Y 
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225

Query: 122 TLIDGYCKMGNINEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQ 181
            +++G CK G+ + A  + + M    + P  +   T++ G CK   +  A N   E+ ++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285

Query: 182 GLSINPVTCFSVIHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEA 241
           G+  N VT  S+I  LC   R+  A +    M+ R   P     + L+    K+GK  EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345

Query: 242 TELWFRLLEKGSPASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILG 301
            +L+  ++++    S  T ++L++G C    +  A ++ + M+ +    D +TYNTLI G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405

Query: 302 CCKEGKVEECFRFKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSN 361
            CK  +VEE      EM+++G+  +  T N L+ GL  AG  D A +++ E  + G+  N
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 362 VHTYGVLMDGHCKANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRD 421
           + TY  L+DG CK  ++E    +F  L   KMEP    YNI+I   C  G +   + L  
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 422 EMKGKGIFPTCATYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLG 481
            +  KG+ P    Y+++I G C  G  E+A  L  EM+ +G LPN  CY  LI    + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 482 QMDIAEATLLEMTS 496
             + +   + EM S
Sbjct: 586 DREASAELIKEMRS 599

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136653.13.9e-308100.00pentatricopeptide repeat-containing protein At4g19440, chloroplastic, partial [M... [more]
XP_023552294.16.5e-27187.55pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... [more]
KAG7015117.13.9e-26886.96Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022984601.13.9e-26886.58pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... [more]
KAG6577115.11.5e-26786.77Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q940A61.2e-15852.53Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... [more]
Q6NQ834.6e-7830.53Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q0WKV31.5e-7630.16Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9SXD11.9e-7630.16Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Q9LVQ52.5e-7630.60Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1C8541.9e-308100.00pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordic... [more]
A0A6J1J2L61.9e-26886.58pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1ETG91.4e-26686.38pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1FWH74.1e-26385.21pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... [more]
A0A6J1ISC05.0e-26185.02LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chlo... [more]
Match NameE-valueIdentityDescription
AT4G19440.18.5e-16052.53Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G19440.28.5e-16052.53Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G22470.13.3e-7930.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.11.1e-7730.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62670.11.4e-7730.16rna processing factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 204..316
e-value: 5.6E-26
score: 93.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 457..514
e-value: 4.1E-17
score: 64.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 95..203
e-value: 2.5E-28
score: 100.7
coord: 1..94
e-value: 8.5E-31
score: 108.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 317..390
e-value: 8.5E-22
score: 79.6
coord: 391..456
e-value: 2.1E-20
score: 75.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 226..252
e-value: 0.0024
score: 18.0
coord: 259..288
e-value: 3.4E-5
score: 23.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 7..39
e-value: 5.6E-8
score: 32.4
coord: 357..387
e-value: 1.1E-5
score: 25.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 363..397
e-value: 4.4E-8
score: 30.8
coord: 153..186
e-value: 0.0014
score: 16.6
coord: 48..81
e-value: 4.8E-9
score: 33.8
coord: 261..291
e-value: 1.5E-6
score: 26.0
coord: 398..432
e-value: 2.2E-9
score: 34.9
coord: 83..117
e-value: 4.4E-9
score: 33.9
coord: 434..467
e-value: 6.9E-9
score: 33.3
coord: 118..151
e-value: 2.6E-9
score: 34.7
coord: 293..327
e-value: 1.5E-10
score: 38.6
coord: 15..47
e-value: 4.2E-6
score: 24.6
coord: 468..501
e-value: 1.0E-6
score: 26.5
coord: 328..361
e-value: 1.8E-7
score: 28.9
coord: 226..253
e-value: 0.0024
score: 15.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 395..444
e-value: 1.1E-16
score: 60.8
coord: 115..164
e-value: 3.8E-14
score: 52.6
coord: 465..514
e-value: 4.7E-16
score: 58.7
coord: 291..339
e-value: 3.2E-17
score: 62.4
coord: 45..93
e-value: 3.3E-17
score: 62.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 11.520384
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 11.893068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 11.73961
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 13.153618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 13.657837
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 8.758137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 12.594591
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 11..45
score: 11.421732
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 12.221907
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 11.191545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 8.911594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 10.818861
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 1..514
NoneNo IPR availablePANTHERPTHR47938:SF7REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..514
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 231..355
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 21..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012869.1MS012869.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding