MS012778 (gene) Bitter gourd (TR) v1

Overview


Name	MS012778
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	stress-response A/B barrel domain-containing protein UP3
Location	scaffold63: 3365833 .. 3368520 (-)
RNA-Seq Expression	MS012778
Synteny	MS012778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGATTCAAGCTCACTCCCCAAATCCACACTTCTTCTTTCTTGCCCCAAACCCTTCAGTTTCCCGCCACTTCTCGCTCCATGGTGAGACGTCTTGATTTTGTTTTGCCTTTTCTCTTCTTTTATATGTAGAATTGGAATGTTTATCGAGTTCTACCATCAGAGAATTGCGATTTTTTGTTGTTGTGAAAATTAATTGTTTTGTATTGAATTTTCTGCACGCTCGTACAGTTTCTCATTTATGTGGACTCAAAGCACCGATAGGTCGACGAAGTGCACGAACGTCTAAAATTTCTGCCTCCGGGGAGCACAGCCCAACCAACAATTTGGGGAAGAAAAGGTACAAGCCTCTCAAATTGCAATTTCAAAATTTTCCGCAATCTATTCTATATGATGCATTGCCCTGCCCAAGAGTTGCAATGTACATTTCTTTTCCCAATTTTACGTAGAAAGGTTTTCGAACACATATCTCTGCTCAAAGCGAAGGAAAATATTTCTGAAAAAGAAGAGAATGATATGCTGGATTATCTATATACCACGCAATATCAAATGGGGGGCATTGTTGCCGTATCATTGGGTGAGTTTCCGGCATTCTGATATCTAAAATCATGGAATGTTCAAATTATTTATTTATGTTTTTAGTAAAGTTCTTCCAACTCAGGACGATCCTCCCTTTGTATTATTTCATTGTAAAGTTTATTTTCCTTTTACTTCTGAAGGACGTGCCTGTGATCAAAACAATGAAAGGTATACCCACTGTGTATATATGCGTTTCCAAAGAAAGGAAGACTTGGAGAAATTCTATGTGAACCCTTTCTATTCGCGAGTACTAAAGGAGCATGTGATGCCTTATTGCCATGTATGCCTCAACATGTAATACAAATACTCTCTTCATCTAACTTCCTTCCTTTTTTTTTATTCTTCCCTGTTCCCTCCATCTTTTTCTCAGTATCTGTTCAACTTATGAATGGGTTTACCGTCTATACCAGGGACTGATTCATGTAGATTATGAGTCGGAGGTGGAAGATGATATGCTTCCCATATTCCGAAAGGGAGAGGTTTGAACCAAAACTAAATTTCTTGCTAGCTTTTTGGACAAAAATGCAATCTCTAGGTGCCACTATAATGTATATCATTATTTAGTTTTTTTGAAGAACATTGCTTGTGTGATATAATGGATTTTCTGGGGACTTGAAATCACATCTATTAGTGTGAATTTCTTTTAGATTTGTGAAAGGGAAGTATCAGAATCTTTGGAGTGGGGAGAGCCATGAACTTGAAATACTGAGTGGAAGTGGGTTGCTGGACTTCTTTCAGGAAAAGGATACCGAATCTGGTCTACTGATTTTTTTTCCCCCTTCTTCTTATTATGTTATTTCTCATATATCACATGCTAAATCTGAAATGCGAGGAAGTTAGTACGACAATAGTGGGACTAAGGACAGATGTTTGAAATTCGAGAAATCTGAAATGCGAGGAATCTGGTCTACTGAGTTTTTGGAATAGTGTTTTTGTTTTGAGATGTTGACTACGTCGAGCTTAGTGGGATTTCCCCTTGCTTGGAAACAGGACTATTAGTATTGAAAAGTAGAATTTGTTCCACTTTGTTTTATGTCTTACAATGATCTCTGGTAATATGGGCTTGACAATACCTTTAAAATATTTAGTAGTCACAAAGAGCTTTGATGTCAGGAATTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGCCAACCTTTAGAAGATGCATTAAATTCTCTTGAGAGACTGACGATAGCAAATCCTTCCTTAATTGTCCAGTTTACGCAAGGTATATTTTTATATTGAATTATTTATTCTAAAACTTGGAGAGAAACATCAACATACATTATATATAGCTATCGAGTTTGAATTTGATGTGAATTACTAGTGACATGCATCCCTAAATATGTGATGAGATTATCTTTAGCTAACCAGTACTTGTAAGTTATTCTTTTCAGATATCAAGTAGTGGGATTTTTATGTTTTGAATTCATATCAGGTTTCAATTTTAATCCCAGTTGTAAGGAGTTTACACATGGAGTTGTTATACGATTTCGGTCAAGTAAGCACTTTTATGTCTTTCTATTAATTTATATCCAATAATGGGACCTTCAATGGCGGCCTCAATATAACTTGTTTTGCAGTTAATGCCTTCGAGATATTTACAGGCTGCTCAGATTACAAAGAAGTAAGATACCCTGTTGATCAAGTCATCATATTTGCAGTTATTATTTTCTTTTTTTTACCCCAATTTTTAGTTTGAACCACCACCATCTGTTTGTGATTTTAAAATATCTTCCTTCATTGTTGACTTCTAACTACAATCGGGGCAAAAAATTCCTTACGTTTCATGTCTGCTCCATATTCTGCATACTACCATTTCTTTTTCAAGTTAGAAATGAGAATAACCTAAAAACCCTGAAATTTGGAAATTTTTTTACCTCAAATTATGAATGCGTAATTGCCAAGTTTTACTCTGAATCATCTGAGAATTTTGTTGAATATGACTTGACTTTTGTCTAATATAGTGATTGCCTAATCAATTTTCATTTGGAAAGTAGATGTGGAGGTCTAAGTTCCAACCAATCATCCAGAAAACAGTTTCTCTTCACTTTTCTGTTGACCCAGTAGGGACTGAGATCATG

mRNA sequence

ATGCTGATTCAAGCTCACTCCCCAAATCCACACTTCTTCTTTCTTGCCCCAAACCCTTCAGTTTCCCGCCACTTCTCGCTCCATGTTTCTCATTTATGTGGACTCAAAGCACCGATAGGTCGACGAAGTGCACGAACGTCTAAAATTTCTGCCTCCGGGGAGCACAGCCCAACCAACAATTTGGGGAAGAAAAGAAAGGTTTTCGAACACATATCTCTGCTCAAAGCGAAGGAAAATATTTCTGAAAAAGAAGAGAATGATATGCTGGATTATCTATATACCACGCAATATCAAATGGGGGGCATTGTTGCCGTATCATTGGGACGTGCCTGTGATCAAAACAATGAAAGGTATACCCACTGTGTATATATGCGTTTCCAAAGAAAGGAAGACTTGGAGAAATTCTATGTGAACCCTTTCTATTCGCGAGTACTAAAGGAGCATGTGATGCCTTATTGCCATGGACTGATTCATGTAGATTATGAGTCGGAGGTGGAAGATGATATGCTTCCCATATTCCGAAAGGGAGAGGAATTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGCCAACCTTTAGAAGATGCATTAAATTCTCTTGAGAGACTGACGATAGCAAATCCTTCCTTAATTGTCCAGTTTACGCAAGGTTTCAATTTTAATCCCAGTTGTAAGGAGTTTACACATGGAGTTGTTATACGATTTCGGTCAATTAATGCCTTCGAGATATTTACAGGCTGCTCAGATTACAAAGAAATGTGGAGGTCTAAGTTCCAACCAATCATCCAGAAAACAGTTTCTCTTCACTTTTCTGTTGACCCAGTAGGGACTGAGATCATG

Coding sequence (CDS)

ATGCTGATTCAAGCTCACTCCCCAAATCCACACTTCTTCTTTCTTGCCCCAAACCCTTCAGTTTCCCGCCACTTCTCGCTCCATGTTTCTCATTTATGTGGACTCAAAGCACCGATAGGTCGACGAAGTGCACGAACGTCTAAAATTTCTGCCTCCGGGGAGCACAGCCCAACCAACAATTTGGGGAAGAAAAGAAAGGTTTTCGAACACATATCTCTGCTCAAAGCGAAGGAAAATATTTCTGAAAAAGAAGAGAATGATATGCTGGATTATCTATATACCACGCAATATCAAATGGGGGGCATTGTTGCCGTATCATTGGGACGTGCCTGTGATCAAAACAATGAAAGGTATACCCACTGTGTATATATGCGTTTCCAAAGAAAGGAAGACTTGGAGAAATTCTATGTGAACCCTTTCTATTCGCGAGTACTAAAGGAGCATGTGATGCCTTATTGCCATGGACTGATTCATGTAGATTATGAGTCGGAGGTGGAAGATGATATGCTTCCCATATTCCGAAAGGGAGAGGAATTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGCCAACCTTTAGAAGATGCATTAAATTCTCTTGAGAGACTGACGATAGCAAATCCTTCCTTAATTGTCCAGTTTACGCAAGGTTTCAATTTTAATCCCAGTTGTAAGGAGTTTACACATGGAGTTGTTATACGATTTCGGTCAATTAATGCCTTCGAGATATTTACAGGCTGCTCAGATTACAAAGAAATGTGGAGGTCTAAGTTCCAACCAATCATCCAGAAAACAGTTTCTCTTCACTTTTCTGTTGACCCAGTAGGGACTGAGATCATG

Protein sequence

MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNNLGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTHCVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVIRFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM

Homology

[Close]

BLAST of MS012778 vs. NCBI nr
Match: XP_022136509.1 (stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136510.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136511.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136512.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136513.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136514.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136515.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136516.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136518.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136519.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136520.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia])

HSP 1 Score: 590.1 bits (1520), Expect = 1.0e-164
Identity = 285/287 (99.30%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN
Sbjct: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHG+VI
Sbjct: 181 YGVEFVLLIKFLQDSFGEPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGIVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. NCBI nr
Match: XP_022931509.1 (stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >XP_022931510.1 stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >XP_023552210.1 stress-response A/B barrel domain-containing protein UP3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.5 bits (1334), Expect = 3.8e-143
Identity = 253/287 (88.15%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHSPNPH FFL  +PS SRHFS+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSRVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. NCBI nr
Match: XP_023552209.1 (stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552211.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.3 bits (1331), Expect = 8.4e-143
Identity = 252/287 (87.80%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHSPNPH FFL  +PS+SRH S+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAHSPNPHVFFLPRSPSISRHLSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSRVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. NCBI nr
Match: XP_038896518.1 (stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida] >XP_038896524.1 stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 254/287 (88.50%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHS NPHFFFL  NPS+S HFS HVSH   LK+P+GRR+   S+ISASGEH+PT  
Sbjct: 1   MLIQAHSQNPHFFFLPQNPSISPHFSFHVSHSRELKSPMGRRNESMSRISASGEHTPTII 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKAKENISE+EENDMLDYLYTTQYQM GIVAVSLGRACDQNNE YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMKGIVAVSLGRACDQNNESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFY RVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYLRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLERLTI NPSLIVQ TQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQVTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFEIFTG SDYK+MW+SKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSIKAFEIFTGSSDYKDMWKSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. NCBI nr
Match: XP_022985456.1 (stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima] >XP_022985457.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 250/287 (87.11%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQA+SPNPH FFL  +PS SRH S+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAYSPNPHAFFLPRSPSTSRHLSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  LGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSR+L EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRILNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSL+FSVDPVGTEIM
Sbjct: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLYFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. ExPASy Swiss-Prot
Match: Q9SYD8 (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana OX=3702 GN=DABB1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.5e-05
Identity = 49/219 (22.37%), Postives = 98/219 (44.75%), Query Frame = 0


Query: 67  VFEHISLLKAK-ENISEKEENDMLDYL--YTTQYQMGGIVAVSLGRACDQNNERYTHCVY 126
           + EH+ L K   +++   + N M++ +       Q+  +   S+ R        +TH ++
Sbjct: 4   IVEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLH 63

Query: 127 MRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDML--PIFRKGEEFNY 186
            R++ KEDL  + ++P + RV+KE        ++ VD+ +E   + L  P+   G+    
Sbjct: 64  SRYRSKEDLNAYAIHPDHVRVVKES-ESIREDIMAVDWIAEQAPEALAPPLGSIGK---- 123

Query: 187 GVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPS-CKEFTHGVVI 246
               + L+K  ++     +E+A   +  +       I Q T G NF+P   K+F+ G + 
Sbjct: 124 ----ITLLKLKEN----VMEEAKLEIMEVMKEKFEGIDQITVGENFSPGRSKDFSIGSIS 183

Query: 247 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSV 280
            FR +   E      D  ++   K +  +  T+ + F+V
Sbjct: 184 YFRDLGEIE---AVDDQMKLQNDKIRDYVDDTIVVEFNV 206

[Close]

BLAST of MS012778 vs. ExPASy TrEMBL
Match: A0A6J1C445 (stress-response A/B barrel domain-containing protein UP3 OS=Momordica charantia OX=3673 GN=LOC111008201 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 4.9e-165
Identity = 285/287 (99.30%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN
Sbjct: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHG+VI
Sbjct: 181 YGVEFVLLIKFLQDSFGEPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGIVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. ExPASy TrEMBL
Match: A0A6J1EUF6 (stress-response A/B barrel domain-containing protein UP3 OS=Cucurbita moschata OX=3662 GN=LOC111437663 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 253/287 (88.15%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQAHSPNPH FFL  +PS SRHFS+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSRVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSLHFSVDPVGTEIM
Sbjct: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. ExPASy TrEMBL
Match: A0A6J1J4Y2 (stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483461 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.7e-142
Identity = 250/287 (87.11%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQA+SPNPH FFL  +PS SRH S+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAYSPNPHAFFLPRSPSTSRHLSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  LGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSR+L EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRILNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSL+FSVDPVGTEIM
Sbjct: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLYFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. ExPASy TrEMBL
Match: A0A0A0KUW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G049070 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 6.1e-139
Identity = 246/287 (85.71%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQA+S NPHFFFL  NPS+S H S +VSH   LK+P+GRR    S+ISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPSNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           +GKKRKVFEHISLLKAKENISE+EENDMLDYLYTTQYQM GIVAVSLGRACDQNNERYTH
Sbjct: 61  VGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNERYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQ KEDLEKFYVNPFY RVL EHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYKSEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFG+PLEDALNSLERLTI NPSLIVQFTQG NFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSINAFEIFTG S YK++W+SKFQPIIQKTV+LHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTGSSQYKDIWKSKFQPIIQKTVALHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. ExPASy TrEMBL
Match: A0A1S4DYT7 (stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493150 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.1e-138
Identity = 244/287 (85.02%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60
           MLIQA+S NPHFFFL PNPS+S H S +VSH   LK+P+GRR    S+ISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPPNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120
           LGKKRKVFEHISLLKAKENISE EENDMLDYLYTTQYQM GIVAVSLGRACDQNN RYTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEDEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNGRYTH 120

Query: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQ KEDLEKFYVNPFY RVL EHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFG+PLEDALNSLERLTI NPSLIVQFTQG NFNP+CKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFCQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPTCKEFTHGVVI 240

Query: 241 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSINAFEIFT  ++YK+ W+SKFQPI+QKTV LHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTSSTEYKDTWKSKFQPIVQKTVPLHFSVDPVGTEIM 287

[Close]

BLAST of MS012778 vs. TAIR 10
Match: AT2G32500.1 (Stress responsive alpha-beta barrel domain protein )

HSP 1 Score: 307.0 bits (785), Expect = 1.6e-83
Identity = 157/281 (55.87%), Postives = 200/281 (71.17%), Query Frame = 0


Query: 11  HFFFLAPNPSVSRHFSLH----VSHLCGLKAPIGRRSARTSKISASGEHSPTNNLGKKRK 70
           H     P P ++R F  +      H C  K P     A   +I++S  +       K RK
Sbjct: 3   HQALALPRPILTRGFVSNGGGMFVHQCRTKTPRVTFCAADDQIASSKSN-------KTRK 62

Query: 71  VFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTHCVYMRF 130
           V EH+ LLKAKE +SE+ E DMLDYLYTTQYQM GIVA+S+G   D+NNE +TH +YMRF
Sbjct: 63  VVEHVCLLKAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNNEYFTHALYMRF 122

Query: 131 QRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFV 190
           Q+KEDL+KFY NPF+ +VL E+V P+CHGL +VDYESEVEDD+L IFRKGEE+NYG EFV
Sbjct: 123 QKKEDLDKFYENPFFLKVLNEYVTPFCHGLTNVDYESEVEDDILAIFRKGEEYNYGEEFV 182

Query: 191 LLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPSCKEFTHGVVIRFRSIN 250
           LLI F + +  +  +DA++S  +LT + PSLIVQ TQG NFN S KEFTH  V+RFRS +
Sbjct: 183 LLITFAKSASEKNTKDAMDSFAQLTSSLPSLIVQSTQGSNFNGSSKEFTHAAVVRFRSFD 242

Query: 251 AFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           A EIF    +YK+MWRS+F+P I+K+ +LHFSVDPVGT++M
Sbjct: 243 AMEIFFEGREYKDMWRSQFEPFIEKSEALHFSVDPVGTDVM 276

[Close]

BLAST of MS012778 vs. TAIR 10
Match: AT1G51360.1 (dimeric A/B barrel domainS-protein 1 )

HSP 1 Score: 49.7 bits (117), Expect = 4.6e-06
Identity = 49/219 (22.37%), Postives = 98/219 (44.75%), Query Frame = 0


Query: 67  VFEHISLLKAK-ENISEKEENDMLDYL--YTTQYQMGGIVAVSLGRACDQNNERYTHCVY 126
           + EH+ L K   +++   + N M++ +       Q+  +   S+ R        +TH ++
Sbjct: 4   IVEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLH 63

Query: 127 MRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDML--PIFRKGEEFNY 186
            R++ KEDL  + ++P + RV+KE        ++ VD+ +E   + L  P+   G+    
Sbjct: 64  SRYRSKEDLNAYAIHPDHVRVVKES-ESIREDIMAVDWIAEQAPEALAPPLGSIGK---- 123

Query: 187 GVEFVLLIKFLQDSFGQPLEDALNSLERLTIANPSLIVQFTQGFNFNPS-CKEFTHGVVI 246
               + L+K  ++     +E+A   +  +       I Q T G NF+P   K+F+ G + 
Sbjct: 124 ----ITLLKLKEN----VMEEAKLEIMEVMKEKFEGIDQITVGENFSPGRSKDFSIGSIS 183

Query: 247 RFRSINAFEIFTGCSDYKEMWRSKFQPIIQKTVSLHFSV 280
            FR +   E      D  ++   K +  +  T+ + F+V
Sbjct: 184 YFRDLGEIE---AVDDQMKLQNDKIRDYVDDTIVVEFNV 206

The following BLAST results are available for this feature:

BLAST of MS012778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136509.1	1.0e-164	99.30	stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >...	[more]
XP_022931509.1	3.8e-143	88.15	stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >X...	[more]
XP_023552209.1	8.4e-143	87.80	stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita p...	[more]
XP_038896518.1	1.4e-142	88.50	stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida] >XP...	[more]
XP_022985456.1	1.6e-141	87.11	stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita m...	[more]

BLAST of MS012778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYD8	6.5e-05	22.37	Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thalia...	[more]

BLAST of MS012778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C445	4.9e-165	99.30	stress-response A/B barrel domain-containing protein UP3 OS=Momordica charantia ...	[more]
A0A6J1EUF6	1.8e-143	88.15	stress-response A/B barrel domain-containing protein UP3 OS=Cucurbita moschata O...	[more]
A0A6J1J4Y2	7.7e-142	87.11	stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucurbita...	[more]
A0A0A0KUW3	6.1e-139	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G049070 PE=4 SV=1	[more]
A0A1S4DYT7	5.1e-138	85.02	stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucumis m...	[more]

BLAST of MS012778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32500.1	1.6e-83	55.87	Stress responsive alpha-beta barrel domain protein	[more]
AT1G51360.1	4.6e-06	22.37	dimeric A/B barrel domainS-protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 68..163 e-value: 6.0E-11 score: 52.4 coord: 183..279 e-value: 0.033 score: 16.2
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 69..162 e-value: 4.7E-11 score: 43.2
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 68..161 score: 19.132599
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 183..277 score: 12.553554
None	No IPR available	GENE3D	3.30.70.100		coord: 65..165 e-value: 2.2E-14 score: 55.7 coord: 182..282 e-value: 2.8E-5 score: 26.5
None	No IPR available	PANTHER	PTHR33178:SF5	EXPRESSED PROTEIN	coord: 31..287
IPR044662	Stress-response A/B barrel domain-containing protein HS1/DABB1-like	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 31..287
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 69..162
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 183..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012778.1	MS012778.1	mRNA