MS012478 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGGCTGATGAGGAACCTGTTGATCAGAAAAGGTATCTCGAAGAAGCTTGCAAGCCCAAGTGCGTGAAACCACTACTTGAATATCAGGTACAGGGTGTTTTACTGGTCTTTACCATGGGGGATTAGCGATAGTTTAGTGAATTTGGATGTCTTTTTTTGTTTAGTTGTTGAACTTGTATTCATTATTCATTATTTCTTATGACCACTTAACTTTAAGAAGCTGGTTTCGTGAATAGCTATACTTCTAGTTCTCTCATTTAATTAGAAATTAAACCACTTCTAGTTTGAAGATTTTGCATCCCTCATGTAGAGTATAACCATTTATAAATGTTAAATGTTCTAATTTCTTCTGAGCCTTGCTTGTGATGCAACTATTAGTATTTAGTGAATTGTCGCTTCAACAGAAAGCCAAACTTTAAACGAGTGGCACCGTCGGTAGAAAATTAGTTAAAAACGAGTGAGAGTGTTTGGTGTTGGGAAGGATAATTGGATTTGGTGGTGGGCTGGTTCTTTTTGTTGAGAAGAAAAAAAATAAAATAAAAGCAGCCACCAACCATTAAGGTTTATGGGCATATTTGGAGAATATCATAATCCTACTTTTAAAGGTCACTGACACTCGTGGGGGAACATAAATATGTTGTCCTCGTGAGATTATGGTGAAAGATCCTCGGTTGTCATGCTAATCTCTTCGGTCATGGAGGTAATGATGGCCCTTGACAAATTGTCTTCTACGATACATAGGTCCTTGAGCTGTAAATTCAAATCAACATTGAGCACACGACTGAAGATGTCTTTTCTCCAGAATTTGATACATCTTATGACTCATTGATTTTGGTTGATATCTGCTCTGAGGTTCACGTTGACTCAGCCACTATCTGTCTTTTGATTGTGGCATTGATGAATCTCAAAATTCGTTGAACTTCTCTTTCTCCGTGAATACTAGTCCTCACCAAATTCGAAGAACTTATGCGTAGAGGTGCATGTGATTGTTTTCCAAAAGTCGAAAAATTTATCAAATCTCTTGCTTGTTTCTATGGGTTTCAGCTGAACTCTCTTCCCTGTTGACATTTAAGAACGAGGAGGATCTTAATATTTTTGCTTTGCTTATCATGTCTGAGCAGCAAGCTTATGTTATTCATGGATTCAAATTGTATTATAAGTATGAAGATAAGGTACAGTTATGGTTATTTTCTTTCATGTTATAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGTGGTCACAAGCATTGCACTGGACAGTATTTCGATTACTGGTTTTGCATCGACAAATGTGTAAGTATTTTTTGGGTTTCACAAAGAAGT AGGGCTGATGAGGAACCTGTTGATCAGAAAAGGTATCTCGAAGAAGCTTGCAAGCCCAAGTGCGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGTGGTCACAAGCATTGCACTGGACAGTATTTCGATTACTGGTTTTGCATCGACAAATGTGTAAGTATTTTTTGGGTTTCACAAAGAAGT AGGGCTGATGAGGAACCTGTTGATCAGAAAAGGTATCTCGAAGAAGCTTGCAAGCCCAAGTGCGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGTGGTCACAAGCATTGCACTGGACAGTATTTCGATTACTGGTTTTGCATCGACAAATGTGTAAGTATTTTTTGGGTTTCACAAAGAAGT RADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSIFWVSQRS Homology
BLAST of MS012478 vs. NCBI nr
Match: XP_022149318.1 (cytochrome b-c1 complex subunit 6 [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 5.7e-29 Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of MS012478 vs. NCBI nr
Match: XP_008456103.1 (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo] >XP_008456104.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo] >XP_038878290.1 cytochrome b-c1 complex subunit 6 [Benincasa hispida]) HSP 1 Score: 134.0 bits (336), Expect = 4.8e-28 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. NCBI nr
Match: KAE8650514.1 (hypothetical protein Csa_011326 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 4.8e-28 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. NCBI nr
Match: XP_004140689.1 (cytochrome b-c1 complex subunit 6 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 4.8e-28 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. NCBI nr
Match: XP_022983580.1 (cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]) HSP 1 Score: 133.7 bits (335), Expect = 6.3e-28 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. ExPASy Swiss-Prot
Match: Q0WWE3 (Cytochrome b-c1 complex subunit 6-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR6-1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.0e-28 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of MS012478 vs. ExPASy Swiss-Prot
Match: Q9SJV7 (Cytochrome b-c1 complex subunit 6-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR6-2 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.2e-27 Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of MS012478 vs. ExPASy Swiss-Prot
Match: P48504 (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-22 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of MS012478 vs. ExPASy TrEMBL
Match: A0A6J1D6H2 (Cytochrome b-c1 complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111017759 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.7e-29 Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of MS012478 vs. ExPASy TrEMBL
Match: A0A1S3C350 (Cytochrome b-c1 complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103496141 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.3e-28 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. ExPASy TrEMBL
Match: A0A0A0L6I2 (UCR_hinge domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G212480 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.3e-28 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. ExPASy TrEMBL
Match: A0A6J1J694 (Cytochrome b-c1 complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111482139 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. ExPASy TrEMBL
Match: A0A6J1FRR8 (cytochrome b-c1 complex subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111447856 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of MS012478 vs. TAIR 10
Match: AT1G15120.1 (Ubiquinol-cytochrome C reductase hinge protein ) HSP 1 Score: 124.4 bits (311), Expect = 3.5e-29 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of MS012478 vs. TAIR 10
Match: AT1G15120.2 (Ubiquinol-cytochrome C reductase hinge protein ) HSP 1 Score: 122.1 bits (305), Expect = 1.8e-28 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MS012478 vs. TAIR 10
Match: AT2G01090.1 (Ubiquinol-cytochrome C reductase hinge protein ) HSP 1 Score: 121.7 bits (304), Expect = 2.3e-28 Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of MS012478 vs. TAIR 10
Match: AT2G01090.2 (Ubiquinol-cytochrome C reductase hinge protein ) HSP 1 Score: 121.7 bits (304), Expect = 2.3e-28 Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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