MS012329 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTCAATCAGATCCTCACCTGGCCCTATTTTCTGCAGAAGAGGTATTCCCCTCTTGCTCTGCCTGAATGATTAAAGCAATGTTATCTGGCATTGATGCTAAATTGTATTGGGATTCATGTCCAGGTTGAATTTGTAGCTGAAGATGAACTGGTGGAGATTGTTCCTAACATGAGAATGGATCCTCTCCATTTGATTTGTGTATGTTTTCTTCACCTATTCTGTTCATGTTTAGTGCATACTATTTGATTTATTGCAACTTTAATTTTTCATTGTTGTGTGTGGTTGGTCTTTTCTATTCTGAGCGTTTTTAGTTTCCTTGTTGTTTCCAATAGGGGGATTATGGTCCGTTCTATCCCCAAATAGCAGCTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAGAAAAGAGGGAAATGTGCAATTAGGTCTCCAGAGTGGATGTCTGTGGGTAAGTTCTAATTGTTAAATAGAGTGAATTTTATTTTGTATGTAGACATAATATTTGCAGGCTTTTCTTTTTTCTTCTTCATTAATGTTGGTGGTACTCCTGGATTAAATTTCTTAATCTAACGTAATTACTAGTCTGCATGGTTTTCATGTTTGTAACATATATGCCCATGCTTTTCACTAACATGAATGGGATACAAAAATGCTTGCTTCAAGTAATGGCAATCTACTTATCATCCTTGCAATTCATAATATTGATTTATTGAATGAATTTCGAAATGTCTTAGGGGTTGGGTTGTAACTTTGATCTTTAGTTCTTCGGACCTACTTGGGGGATTCATGGTAAAAGGAAACTCTGCCTCCAAGAGTATAACCTAATCAGTTCACAGTGTAATGGTGCAGCTGACTTTAGCTTGTAACCTTTTCTTTAAAGCTTATAGTCTCAGAAATATTTGAAGGATAATGAGCTATGGATGACAAAGTCTGGAATAGGGGTCTCATCTAGTTTTCATTACCTTTGTTGTCGGATTCTCTATCAATCACAAGAAAACTATATGATTATTCTCAAATTACAAAAGAGCCATAGATTATGGTGACTCAGAAGGGAAAGAAGTATGTAGTTTGGCCAGACGTGAAAGAGCCAAATGGTTATGGTGACTTGGAGGGGAAAAATATTGGTGTTAGCACGCTACTACTTTCTTGAATGCATATTTAATAGCAGTAAAATTTAAAGATATCGCCACTGGTTTCATTGAGGACTTAATTAGTTACTTAAGTAGGATGGACTGTCCAATAGTAGTAGTATCTTAAAATAACCTTGATATGTACTCTTATTTATAACATTTTTCACAGTGAGTGCATTAAGCATCTTTCCCTTTAATCGACATATATATTCTCTCAACGATTATGATGAGACGAAAAAAAATGTGGGTGACAAAGAAGAGAGATGAGTGATTACAGTCAAGGTAGATAGTTTGCAATCTCATCCTTTTGTGCTTTCTGGACTAGAAAAGCTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGAGCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCGAAACTTCTTTTTGACCAGTAAGTACTTTAAGTCTTTGACATTATAAATCTTTGCTTGATCATTAAATGAGTTGATGTTAGTTTTGTGTTGTGGACGATAGTGCACGAGATGACGTTCCGGACATGTATTTGGTGAGTAGAAGCTTTAATTTTGAGTTTAGGCATATAATTAGCTTTTCTTGTGAGGTATTTGATTGAGTTACTTCTCATAGGTGAGATCTCTTATTGAAGATATTAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCAGTGAAGGTAGGCTTCTGACCAAGGGTTTTATTTTCTTATTTTTTCTTATGCACCGGCTAAATTTATAAACTTATAGTGATTTATAATGTACTAGTTGTAACAGAAAAGGTAATGAAATGCAACCTTTATTCTTTCCTTCCTCCCCTCTGGGTTTTTCTTTTTGATTATCAGATTATGTGATGATGTGATCAGGGTTTTCTGGTTTTGTAATCCTAGATTAAAGATCTTTCTGCCATGGAGGTGAATATAGTTCGACCATTTGTTGGTAGAGCCCTGCAAGCAATCTACAAGCACGGGAATCCGGAGTTGGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCTCAAGGACACGATCCCGGACAAAGAGTATGTCTCTTTTGTAAT ATGGCTGGTCAATCAGATCCTCACCTGGCCCTATTTTCTGCAGAAGAGGTTGAATTTGTAGCTGAAGATGAACTGGTGGAGATTGTTCCTAACATGAGAATGGATCCTCTCCATTTGATTTGTGGGGATTATGGTCCGTTCTATCCCCAAATAGCAGCTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAGAAAAGAGGGAAATGTGCAATTAGGTCTCCAGAGTGGATGTCTGTGGAAAAGCTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGAGCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCGAAACTTCTTTTTGACCATGCACGAGATGACGTTCCGGACATGTATTTGGTGAGATCTCTTATTGAAGATATTAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTTTCTGCCATGGAGGTGAATATAGTTCGACCATTTGTTGGTAGAGCCCTGCAAGCAATCTACAAGCACGGGAATCCGGAGTTGGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCTCAAGGACACGATCCCGGACAAAGAGTATGTCTCTTTTGTAAT ATGGCTGGTCAATCAGATCCTCACCTGGCCCTATTTTCTGCAGAAGAGGTTGAATTTGTAGCTGAAGATGAACTGGTGGAGATTGTTCCTAACATGAGAATGGATCCTCTCCATTTGATTTGTGGGGATTATGGTCCGTTCTATCCCCAAATAGCAGCTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAGAAAAGAGGGAAATGTGCAATTAGGTCTCCAGAGTGGATGTCTGTGGAAAAGCTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGAGCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCGAAACTTCTTTTTGACCATGCACGAGATGACGTTCCGGACATGTATTTGGTGAGATCTCTTATTGAAGATATTAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTTTCTGCCATGGAGGTGAATATAGTTCGACCATTTGTTGGTAGAGCCCTGCAAGCAATCTACAAGCACGGGAATCCGGAGTTGGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCTCAAGGACACGATCCCGGACAAAGAGTATGTCTCTTTTGTAAT MAGQSDPHLALFSAEEVEFVAEDELVEIVPNMRMDPLHLICGDYGPFYPQIAAEVPLWLAIALKKRGKCAIRSPEWMSVEKLTQILEAERESQGAFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERMTNVQPQGHDPGQRVCLFCN Homology
BLAST of MS012329 vs. NCBI nr
Match: XP_022149352.1 (DNA replication complex GINS protein PSF2 [Momordica charantia] >XP_022149353.1 DNA replication complex GINS protein PSF2 [Momordica charantia]) HSP 1 Score: 413.7 bits (1062), Expect = 9.6e-112 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of MS012329 vs. NCBI nr
Match: XP_038905117.1 (DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida] >XP_038905118.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida] >XP_038905119.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida]) HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106 Identity = 196/205 (95.61%), Postives = 199/205 (97.07%), Query Frame = 0
BLAST of MS012329 vs. NCBI nr
Match: XP_023517317.1 (DNA replication complex GINS protein PSF2 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7027507.1 DNA replication complex GINS protein PSF2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-105 Identity = 194/205 (94.63%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. NCBI nr
Match: KAG6595523.1 (DNA replication complex GINS protein PSF2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-105 Identity = 194/205 (94.63%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. NCBI nr
Match: XP_022966456.1 (DNA replication complex GINS protein PSF2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-105 Identity = 193/205 (94.15%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. ExPASy Swiss-Prot
Match: Q9C7A8 (DNA replication complex GINS protein PSF2 OS=Arabidopsis thaliana OX=3702 GN=GINS2 PE=2 SV=2) HSP 1 Score: 275.8 bits (704), Expect = 4.1e-73 Identity = 139/205 (67.80%), Postives = 164/205 (80.00%), Query Frame = 0
BLAST of MS012329 vs. ExPASy Swiss-Prot
Match: Q9D600 (DNA replication complex GINS protein PSF2 OS=Mus musculus OX=10090 GN=Gins2 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34 Identity = 75/167 (44.91%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of MS012329 vs. ExPASy Swiss-Prot
Match: Q9Y248 (DNA replication complex GINS protein PSF2 OS=Homo sapiens OX=9606 GN=GINS2 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.1e-33 Identity = 73/167 (43.71%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of MS012329 vs. ExPASy Swiss-Prot
Match: Q7ZT46 (DNA replication complex GINS protein PSF2 OS=Xenopus laevis OX=8355 GN=gins2 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.0e-32 Identity = 71/167 (42.51%), Postives = 105/167 (62.87%), Query Frame = 0
BLAST of MS012329 vs. ExPASy Swiss-Prot
Match: P0CQ31 (DNA replication complex GINS protein PSF2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PSF2 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27 Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of MS012329 vs. ExPASy TrEMBL
Match: A0A6J1D7Q0 (DNA replication complex GINS protein PSF2 OS=Momordica charantia OX=3673 GN=LOC111017783 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-112 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of MS012329 vs. ExPASy TrEMBL
Match: A0A6J1HPD8 (DNA replication complex GINS protein PSF2 OS=Cucurbita maxima OX=3661 GN=LOC111466105 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105 Identity = 193/205 (94.15%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. ExPASy TrEMBL
Match: A0A6J1EAX5 (DNA replication complex GINS protein PSF2 OS=Cucurbita moschata OX=3662 GN=LOC111432452 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.2e-105 Identity = 193/205 (94.15%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. ExPASy TrEMBL
Match: A0A5D3C8I7 (DNA replication complex GINS protein PSF2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00350 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104 Identity = 191/207 (92.27%), Postives = 200/207 (96.62%), Query Frame = 0
BLAST of MS012329 vs. ExPASy TrEMBL
Match: A0A1S4E3Y0 (DNA replication complex GINS protein PSF2 OS=Cucumis melo OX=3656 GN=LOC103501165 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 8.8e-103 Identity = 189/205 (92.20%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of MS012329 vs. TAIR 10
Match: AT3G12530.1 (PSF2 ) HSP 1 Score: 275.8 bits (704), Expect = 2.9e-74 Identity = 139/205 (67.80%), Postives = 164/205 (80.00%), Query Frame = 0
BLAST of MS012329 vs. TAIR 10
Match: AT3G12530.2 (PSF2 ) HSP 1 Score: 245.0 bits (624), Expect = 5.5e-65 Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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