MS011736 (gene) Bitter gourd (TR) v1

Overview
NameMS011736
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCysteine-rich RLK 29
Locationscaffold11: 278420 .. 278594 (+)
RNA-Seq ExpressionMS011736
SyntenyMS011736
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAAGGAAGGCACGGGATGGTACCACGATTGCCAGATTCTTTACTCTGTTCAGGGTGAGATCGACTTGTCGGCATGGAAAATTATAGCCAACGGACTGTAAAGCCCCACACACGAAGGGTTTCAACGAGGCATTGAGGGAGTTGGTGGATGAGACGCGAGTGAGGCCTGCCAAC

mRNA sequence

CAGAAGGAAGGCACGGGATGGTACCACGATTGCCAGATTCTTTACTCTGTTCAGGGTGAGATCGACTTGTCGGCATGGAAAATTATAGCCAACGGAAAAGCCCCACACACGAAGGGTTTCAACGAGGCATTGAGGGAGTTGGTGGATGAGACGCGAGTGAGGCCTGCCAAC

Coding sequence (CDS)

CAGAAGGAAGGCACGGGATGGTACCACGATTGCCAGATTCTTTACTCTGTTCAGGGTGAGATCGACTTGTCGGCATGGAAAATTATAGCCAACGGAAAAGCCCCACACACGAAGGGTTTCAACGAGGCATTGAGGGAGTTGGTGGATGAGACGCGAGTGAGGCCTGCCAAC

Protein sequence

QKEGTGWYHDCQILYSVQGEIDLSAWKIIANGKAPHTKGFNEALRELVDETRVRPAN
Homology
BLAST of MS011736 vs. NCBI nr
Match: TYK13073.1 (Cysteine-rich RLK 29 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 9.2e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1    QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
            QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 2567 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 2626

BLAST of MS011736 vs. NCBI nr
Match: XP_008439953.2 (PREDICTED: uncharacterized protein LOC103484586 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 9.2e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
           QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 841 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 900

BLAST of MS011736 vs. NCBI nr
Match: KAA0052751.1 (cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 9.2e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1    QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
            QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 3542 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 3601

BLAST of MS011736 vs. NCBI nr
Match: XP_022142358.1 (cysteine-rich repeat secretory protein 38-like [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLS-AWKIIAN-GKAPHTKGFNEALRELVDETRVRP 58
           QKEGTGWY +CQI+Y   SV GEI +S A +I+ N G+AP  KGFNE LREL+D  R R 
Sbjct: 115 QKEGTGWYGNCQIVYSNNSVHGEISISGATRILYNTGRAPDAKGFNEELRELLDGLRDRA 174

BLAST of MS011736 vs. NCBI nr
Match: KAE8647670.1 (hypothetical protein Csa_003206 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 6.0e-08
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLSAWKIIANGK-APHTKGFNEALRELVDETRVRPA 58
           QKEG GWY DCQILY   SV  E DLSA++I+ N + AP   GFNE LR+L+D  RV  A
Sbjct: 409 QKEGAGWYGDCQILYSNNSVHDETDLSAFQILYNTRVAPDQNGFNEELRDLLDGLRVEAA 468

BLAST of MS011736 vs. ExPASy TrEMBL
Match: A0A5D3CMC3 (Cysteine-rich RLK 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006790 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1    QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
            QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 2567 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 2626

BLAST of MS011736 vs. ExPASy TrEMBL
Match: A0A5A7UGV3 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003670 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1    QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
            QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 3542 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 3601

BLAST of MS011736 vs. ExPASy TrEMBL
Match: A0A1S3AZK3 (uncharacterized protein LOC103484586 OS=Cucumis melo OX=3656 GN=LOC103484586 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLSAWKIIAN-GKAPHTKGFNEALRELVDETRVRPA 58
           QKEG GWY DCQILY   SV  E DL A++I+ N G+AP   GFNE LREL+D  RV  A
Sbjct: 841 QKEGAGWYGDCQILYSNNSVHDETDLPAFRILFNTGRAPDQNGFNEELRELLDGLRVEAA 900

BLAST of MS011736 vs. ExPASy TrEMBL
Match: A0A6J1CN27 (cysteine-rich repeat secretory protein 38-like OS=Momordica charantia OX=3673 GN=LOC111012497 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLS-AWKIIAN-GKAPHTKGFNEALRELVDETRVRP 58
           QKEGTGWY +CQI+Y   SV GEI +S A +I+ N G+AP  KGFNE LREL+D  R R 
Sbjct: 115 QKEGTGWYGNCQIVYSNNSVHGEISISGATRILYNTGRAPDAKGFNEELRELLDGLRDRA 174

BLAST of MS011736 vs. ExPASy TrEMBL
Match: A0A0A0KHG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516580 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-08
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1   QKEGTGWYHDCQILY---SVQGEIDLSAWKIIANGK-APHTKGFNEALRELVDETRVRPA 58
           QKEG GWY DCQILY   SV  E DLSA++I+ N + AP   GFNE LR+L+D  RV  A
Sbjct: 121 QKEGAGWYGDCQILYSNNSVHDETDLSAFQILYNTRVAPDQNGFNEELRDLLDGLRVEAA 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK13073.19.2e-0959.02Cysteine-rich RLK 29 [Cucumis melo var. makuwa][more]
XP_008439953.29.2e-0959.02PREDICTED: uncharacterized protein LOC103484586 [Cucumis melo][more]
KAA0052751.19.2e-0959.02cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa][more]
XP_022142358.13.5e-0859.68cysteine-rich repeat secretory protein 38-like [Momordica charantia][more]
KAE8647670.16.0e-0857.38hypothetical protein Csa_003206 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CMC34.5e-0959.02Cysteine-rich RLK 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255... [more]
A0A5A7UGV34.5e-0959.02Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3AZK34.5e-0959.02uncharacterized protein LOC103484586 OS=Cucumis melo OX=3656 GN=LOC103484586 PE=... [more]
A0A6J1CN271.7e-0859.68cysteine-rich repeat secretory protein 38-like OS=Momordica charantia OX=3673 GN... [more]
A0A0A0KHG12.9e-0857.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011736.1MS011736.1mRNA