MS010619 (gene) Bitter gourd (TR) v1

Overview


Name	MS010619
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	heavy metal-associated isoprenylated plant protein 27
Location	scaffold35: 1041629 .. 1041862 (-)
RNA-Seq Expression	MS010619
Synteny	MS010619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATGTTTTTTTTTTTTTGGTTGCAGAGGGTGGAGATAAAAGTGAAGATGGACTGCGAAGGGTGCGAGAGGAAGGTGAAGAAGTCGGTGGAGGGGATGAAGGGGGTGACGGAGGTGGAGGTGGAGCCGAAGCGGAGCAAGCTTACGGTGGTCGGTTACGTGGACCCCGACAAGGTCCTCCGCCGCGTCCGCCACCGGACCGGGAAGACGGCGGACCTCTGGCCCTACGTGCCC

mRNA sequence

ATAATGTTTTTTTTTTTTTGGTTGCAGAGGGTGGAGATAAAAGTGAAGATGGACTGCGAAGGGTGCGAGAGGAAGGTGAAGAAGTCGGTGGAGGGGATGAAGGGGGTGACGGAGGTGGAGGTGGAGCCGAAGCGGAGCAAGCTTACGGTGGTCGGTTACGTGGACCCCGACAAGGTCCTCCGCCGCGTCCGCCACCGGACCGGGAAGACGGCGGACCTCTGGCCCTACGTGCCC

Coding sequence (CDS)

ATAATGTTTTTTTTTTTTTGGTTGCAGAGGGTGGAGATAAAAGTGAAGATGGACTGCGAAGGGTGCGAGAGGAAGGTGAAGAAGTCGGTGGAGGGGATGAAGGGGGTGACGGAGGTGGAGGTGGAGCCGAAGCGGAGCAAGCTTACGGTGGTCGGTTACGTGGACCCCGACAAGGTCCTCCGCCGCGTCCGCCACCGGACCGGGAAGACGGCGGACCTCTGGCCCTACGTGCCC

Protein sequence

IMFFFFWLQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRTGKTADLWPYVP

Homology

[Close]

BLAST of MS010619 vs. NCBI nr
Match: XP_022133091.1 (heavy metal-associated isoprenylated plant protein 27 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 6.2e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT
Sbjct: 32  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 91

Query: 68  GKTADLWPYVP 79
           GKTADLWPYVP
Sbjct: 92  GKTADLWPYVP 102

[Close]

BLAST of MS010619 vs. NCBI nr
Match: XP_023518572.1 (heavy metal-associated isoprenylated plant protein 27-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQ VEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVL+RVRHRT
Sbjct: 30  LQTVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLQRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GKTAD WPYVP
Sbjct: 90  GKTADFWPYVP 100

[Close]

BLAST of MS010619 vs. NCBI nr
Match: XP_022926427.1 (heavy metal-associated isoprenylated plant protein 27-like [Cucurbita moschata] >XP_023003938.1 heavy metal-associated isoprenylated plant protein 27 [Cucurbita maxima] >KAG6594761.1 Heavy metal-associated isoprenylated plant protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026727.1 Heavy metal-associated isoprenylated plant protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.4 bits (355), Expect = 3.4e-30
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQ VEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVL RVRHRT
Sbjct: 30  LQTVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLHRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GKTAD WPYVP
Sbjct: 90  GKTADFWPYVP 100

[Close]

BLAST of MS010619 vs. NCBI nr
Match: XP_038883487.1 (heavy metal-associated isoprenylated plant protein 27 [Benincasa hispida])

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQRVEIKVKMDCEGCE+KVKKSVEGMKGVTEVEV+PKRSKLTVVGYVDP+KVL RVRHRT
Sbjct: 30  LQRVEIKVKMDCEGCEKKVKKSVEGMKGVTEVEVDPKRSKLTVVGYVDPNKVLHRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GKTA+LWPYVP
Sbjct: 90  GKTAELWPYVP 100

[Close]

BLAST of MS010619 vs. NCBI nr
Match: XP_008440850.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 27 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQRVEIKVKMDCEGCE+KVKKSVEGMKGVTEVEV+PKRSKLTVVGYVD +KVL RVRHRT
Sbjct: 30  LQRVEIKVKMDCEGCEKKVKKSVEGMKGVTEVEVDPKRSKLTVVGYVDSNKVLNRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GK A+LWPYVP
Sbjct: 90  GKAAELWPYVP 100

[Close]

BLAST of MS010619 vs. ExPASy Swiss-Prot
Match: Q67ZW1 (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX=3702 GN=HIPP27 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-25
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 9  QRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRTG 68
          Q+VEIKVKMDCEGCER+V+KSVEGMKGV++V V+PK+SKLTV G+V P KV+ RV HRTG
Sbjct: 19 QKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTG 78

Query: 69 KTADLWPYVP 79
          K A+LWPYVP
Sbjct: 79 KKAELWPYVP 88

[Close]

BLAST of MS010619 vs. ExPASy Swiss-Prot
Match: Q9SZN7 (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX=3702 GN=HIPP26 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-25
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ VEIKVKMDCEGCERKV++SVEGMKGV+ V +EPK  K+TVVGYVDP+KV+ R+ HRT
Sbjct: 25 LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84

Query: 68 GKTADLWPYVP 79
          GK  +LWPYVP
Sbjct: 85 GKKVELWPYVP 95

[Close]

BLAST of MS010619 vs. ExPASy Swiss-Prot
Match: O49613 (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX=3702 GN=HIPP25 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-20
Identity = 41/71 (57.75%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ V+++V +DCEGCERKV++++EGM+G+ +V +EP   K+TVVGYV+P+KV+ R+ HRT
Sbjct: 24 LQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRT 83

Query: 68 GKTADLWPYVP 79
          GK A+L+P+VP
Sbjct: 84 GKRAELYPFVP 94

[Close]

BLAST of MS010619 vs. ExPASy Swiss-Prot
Match: Q9C9A3 (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.3e-19
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          +Q V IKVKMDC+GCER+VK +V  MKGV  VEV  K  K+TV GYV+P KVL+R+  RT
Sbjct: 27 MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRI-ERT 86

Query: 68 GKTADLWPYVP 79
          GK A++WPYVP
Sbjct: 87 GKKAEIWPYVP 96

[Close]

BLAST of MS010619 vs. ExPASy Swiss-Prot
Match: Q9LF57 (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ V+IKVKMDC+GCER+V+  V  MKGV  VEV  K+S++TV G+VDP+KVL+RV+  T
Sbjct: 25 LQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVK-ST 84

Query: 68 GKTADLWPYVP 79
          GK A+ WPY+P
Sbjct: 85 GKKAEFWPYIP 94

[Close]

BLAST of MS010619 vs. ExPASy TrEMBL
Match: A0A6J1BU19 (heavy metal-associated isoprenylated plant protein 27 OS=Momordica charantia OX=3673 GN=LOC111005771 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT
Sbjct: 32  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 91

Query: 68  GKTADLWPYVP 79
           GKTADLWPYVP
Sbjct: 92  GKTADLWPYVP 102

[Close]

BLAST of MS010619 vs. ExPASy TrEMBL
Match: A0A6J1KY22 (heavy metal-associated isoprenylated plant protein 27 OS=Cucurbita maxima OX=3661 GN=LOC111497381 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQ VEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVL RVRHRT
Sbjct: 30  LQTVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLHRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GKTAD WPYVP
Sbjct: 90  GKTADFWPYVP 100

[Close]

BLAST of MS010619 vs. ExPASy TrEMBL
Match: A0A6J1EEF9 (heavy metal-associated isoprenylated plant protein 27-like OS=Cucurbita moschata OX=3662 GN=LOC111433584 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQ VEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVL RVRHRT
Sbjct: 30  LQTVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLHRVRHRT 89

Query: 68  GKTADLWPYVP 79
           GKTAD WPYVP
Sbjct: 90  GKTADFWPYVP 100

[Close]

BLAST of MS010619 vs. ExPASy TrEMBL
Match: A0A5D3CQC7 (Heavy metal-associated isoprenylated plant protein 27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001100 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQRVEIKVKMDCEGCE+KVKKSVEGMKGVTEVEV+PKRSKLTVVGYVD +KVL RVRHRT
Sbjct: 59  LQRVEIKVKMDCEGCEKKVKKSVEGMKGVTEVEVDPKRSKLTVVGYVDSNKVLNRVRHRT 118

Query: 68  GKTADLWPYVP 79
           GK A+LWPYVP
Sbjct: 119 GKAAELWPYVP 129

[Close]

BLAST of MS010619 vs. ExPASy TrEMBL
Match: A0A7J6FVX2 (HMA domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_007745 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28
Identity = 62/71 (87.32%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 8   LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
           LQ+VEIKVKMDCEGCER+VKKSV+GMKGVTEVEV+PK+SKLTV+GYVDPDKVL RVRHRT
Sbjct: 31  LQKVEIKVKMDCEGCERRVKKSVQGMKGVTEVEVDPKQSKLTVIGYVDPDKVLTRVRHRT 90

Query: 68  GKTADLWPYVP 79
           GK A+LWPYVP
Sbjct: 91  GKKAELWPYVP 101

[Close]

BLAST of MS010619 vs. TAIR 10
Match: AT5G66110.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 9  QRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRTG 68
          Q+VEIKVKMDCEGCER+V+KSVEGMKGV++V V+PK+SKLTV G+V P KV+ RV HRTG
Sbjct: 19 QKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTG 78

Query: 69 KTADLWPYVP 79
          K A+LWPYVP
Sbjct: 79 KKAELWPYVP 88

[Close]

BLAST of MS010619 vs. TAIR 10
Match: AT4G38580.1 (farnesylated protein 6 )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ VEIKVKMDCEGCERKV++SVEGMKGV+ V +EPK  K+TVVGYVDP+KV+ R+ HRT
Sbjct: 25 LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84

Query: 68 GKTADLWPYVP 79
          GK  +LWPYVP
Sbjct: 85 GKKVELWPYVP 95

[Close]

BLAST of MS010619 vs. TAIR 10
Match: AT4G35060.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 41/71 (57.75%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ V+++V +DCEGCERKV++++EGM+G+ +V +EP   K+TVVGYV+P+KV+ R+ HRT
Sbjct: 24 LQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRT 83

Query: 68 GKTADLWPYVP 79
          GK A+L+P+VP
Sbjct: 84 GKRAELYPFVP 94

[Close]

BLAST of MS010619 vs. TAIR 10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 4.4e-20
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          +Q V IKVKMDC+GCER+VK +V  MKGV  VEV  K  K+TV GYV+P KVL+R+  RT
Sbjct: 27 MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRI-ERT 86

Query: 68 GKTADLWPYVP 79
          GK A++WPYVP
Sbjct: 87 GKKAEIWPYVP 96

[Close]

BLAST of MS010619 vs. TAIR 10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 9.9e-20
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 8  LQRVEIKVKMDCEGCERKVKKSVEGMKGVTEVEVEPKRSKLTVVGYVDPDKVLRRVRHRT 67
          LQ V+IKVKMDC+GCER+V+  V  MKGV  VEV  K+S++TV G+VDP+KVL+RV+  T
Sbjct: 25 LQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVK-ST 84

Query: 68 GKTADLWPYVP 79
          GK A+ WPY+P
Sbjct: 85 GKKAEFWPYIP 94

The following BLAST results are available for this feature:

BLAST of MS010619 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133091.1	6.2e-32	100.00	heavy metal-associated isoprenylated plant protein 27 [Momordica charantia]	[more]
XP_023518572.1	2.6e-30	95.77	heavy metal-associated isoprenylated plant protein 27-like [Cucurbita pepo subsp...	[more]
XP_022926427.1	3.4e-30	95.77	heavy metal-associated isoprenylated plant protein 27-like [Cucurbita moschata] ...	[more]
XP_038883487.1	1.3e-29	92.96	heavy metal-associated isoprenylated plant protein 27 [Benincasa hispida]	[more]
XP_008440850.1	4.2e-28	90.14	PREDICTED: heavy metal-associated isoprenylated plant protein 27 [Cucumis melo]	[more]

BLAST of MS010619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZW1	1.5e-25	75.71	Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX...	[more]
Q9SZN7	2.0e-25	74.65	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX...	[more]
O49613	1.9e-20	57.75	Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX...	[more]
Q9C9A3	6.3e-19	63.38	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX...	[more]
Q9LF57	1.4e-18	61.97	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS010619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BU19	3.0e-32	100.00	heavy metal-associated isoprenylated plant protein 27 OS=Momordica charantia OX=...	[more]
A0A6J1KY22	1.6e-30	95.77	heavy metal-associated isoprenylated plant protein 27 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EEF9	1.6e-30	95.77	heavy metal-associated isoprenylated plant protein 27-like OS=Cucurbita moschata...	[more]
A0A5D3CQC7	2.0e-28	90.14	Heavy metal-associated isoprenylated plant protein 27 OS=Cucumis melo var. makuw...	[more]
A0A7J6FVX2	2.0e-28	87.32	HMA domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_007745 PE=4 SV...	[more]

BLAST of MS010619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66110.1	1.1e-26	75.71	Heavy metal transport/detoxification superfamily protein	[more]
AT4G38580.1	1.4e-26	74.65	farnesylated protein 6	[more]
AT4G35060.1	1.4e-21	57.75	Heavy metal transport/detoxification superfamily protein	[more]
AT1G71050.1	4.4e-20	63.38	Heavy metal transport/detoxification superfamily protein	[more]
AT5G17450.1	9.9e-20	61.97	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 14..69 e-value: 2.7E-13 score: 50.1
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 17..64 score: 9.259474
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 12..71 e-value: 6.00339E-13 score: 55.6897
None	No IPR available	GENE3D	3.30.70.100		coord: 8..72 e-value: 9.4E-18 score: 66.4
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 8..78
None	No IPR available	PANTHER	PTHR22814:SF294	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 27	coord: 8..78
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 8..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010619.1	MS010619.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding