MS010371 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGATGCAGAGAGAAGAGGCGCCGGCGATTCAGTGAGCCAGGAGGCGACCCGGCTGCAGAGGCGGGCTCCGTCGTCGATTCAGATAAGCCGGCCGGCGAGCTGGAACGTGGCGATCCCGTTGCTATCCCCGCTGGTGTCTCCTTGCTTGGAGCAAGTCGATGTTTTGATGGGTGAGAACAAGGCGAGGGAGGAGGCGAGGTCGCGGGACAAACCGGCCACCTTTACAAAGTGGAAGCACCCGGCGGCTCCATTCTGTTATGGGCCTGTCCAGAGGACCACCCCCTTTGTGCCCGTC ATGGGCGATGCAGAGAGAAGAGGCGCCGGCGATTCAGTGAGCCAGGAGGCGACCCGGCTGCAGAGGCGGGCTCCGTCGTCGATTCAGATAAGCCGGCCGGCGAGCTGGAACGTGGCGATCCCGTTGCTATCCCCGCTGGTGTCTCCTTGCTTGGAGCAAGTCGATGTTTTGATGGGTGAGAACAAGGCGAGGGAGGAGGCGAGGTCGCGGGACAAACCGGCCACCTTTACAAAGTGGAAGCACCCGGCGGCTCCATTCTGTTATGGGCCTGTCCAGAGGACCACCCCCTTTGTGCCCGTC ATGGGCGATGCAGAGAGAAGAGGCGCCGGCGATTCAGTGAGCCAGGAGGCGACCCGGCTGCAGAGGCGGGCTCCGTCGTCGATTCAGATAAGCCGGCCGGCGAGCTGGAACGTGGCGATCCCGTTGCTATCCCCGCTGGTGTCTCCTTGCTTGGAGCAAGTCGATGTTTTGATGGGTGAGAACAAGGCGAGGGAGGAGGCGAGGTCGCGGGACAAACCGGCCACCTTTACAAAGTGGAAGCACCCGGCGGCTCCATTCTGTTATGGGCCTGTCCAGAGGACCACCCCCTTTGTGCCCGTC MGDAERRGAGDSVSQEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTKWKHPAAPFCYGPVQRTTPFVPV Homology
BLAST of MS010371 vs. NCBI nr
Match: XP_022143991.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]) HSP 1 Score: 196.8 bits (499), Expect = 8.8e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS010371 vs. NCBI nr
Match: KAE8650334.1 (hypothetical protein Csa_009641 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16 Identity = 58/105 (55.24%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of MS010371 vs. NCBI nr
Match: KAB1219144.1 (hypothetical protein CJ030_MR3G008389 [Morella rubra] >KAB1219148.1 hypothetical protein CJ030_MR3G008385 [Morella rubra]) HSP 1 Score: 95.9 bits (237), Expect = 2.1e-16 Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of MS010371 vs. NCBI nr
Match: PON32321.1 (hypothetical protein PanWU01x14_362290 [Parasponia andersonii]) HSP 1 Score: 95.1 bits (235), Expect = 3.6e-16 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of MS010371 vs. NCBI nr
Match: PON98714.1 (hypothetical protein TorRG33x02_056140 [Trema orientale]) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15 Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of MS010371 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-09 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of MS010371 vs. ExPASy TrEMBL
Match: A0A6J1CRZ0 (uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111013769 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.2e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS010371 vs. ExPASy TrEMBL
Match: A0A0A0L8D3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 6.0e-17 Identity = 58/105 (55.24%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of MS010371 vs. ExPASy TrEMBL
Match: A0A6A1W1M7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G008385 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16 Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of MS010371 vs. ExPASy TrEMBL
Match: A0A2P5A713 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_362290 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of MS010371 vs. ExPASy TrEMBL
Match: A0A2P5FLQ7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_056140 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.1e-16 Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of MS010371 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of MS010371 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of MS010371 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 2.9e-08 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|