MS010329 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA Homology
BLAST of MS010329 vs. NCBI nr
Match: XP_022144306.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MS010329 vs. NCBI nr
Match: XP_022950482.1 (protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022974254.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_022975750.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023541021.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >KAG6597025.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028503.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27 Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of MS010329 vs. NCBI nr
Match: XP_011650635.1 (protein transport protein Sec61 subunit beta [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 4.9e-27 Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010329 vs. NCBI nr
Match: XP_038875187.1 (protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]) HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27 Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010329 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >XP_038875266.1 protein transport protein Sec61 subunit beta-like isoform X2 [Benincasa hispida] >KAG6582719.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020688.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27 Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-25 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.3e-06 Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06 Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P60468 (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06 Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: Q9CQS8 (Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b PE=1 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06 Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1CT03 (Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=LOC111014017 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1IH25 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472887 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28 Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1GEY3 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111453574 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28 Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A0A0L6Y8 (Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G117430 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27 Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1EFZ9 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432170 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010329 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27 Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS010329 vs. TAIR 10
Match: AT3G60540.2 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27 Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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