MS010329 (gene) Bitter gourd (TR) v1

Overview


Name	MS010329
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein transport protein Sec61 subunit beta
Location	scaffold878: 252133 .. 252381 (+)
RNA-Seq Expression	MS010329
Synteny	MS010329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT

mRNA sequence

ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT

Coding sequence (CDS)

ATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTGCGAAGAGAAGCT

Protein sequence

MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

Homology

[Close]

BLAST of MS010329 vs. NCBI nr
Match: XP_022144306.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS
Sbjct: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFVSILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVSILHVMGKLYFVRREA 83

[Close]

BLAST of MS010329 vs. NCBI nr
Match: XP_022950482.1 (protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022974254.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_022975750.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023541021.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >KAG6597025.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028503.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GGGAPQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGGAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. NCBI nr
Match: XP_011650635.1 (protein transport protein Sec61 subunit beta [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 4.9e-27
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GGG PQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGGGPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV++LHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. NCBI nr
Match: XP_038875187.1 (protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
           M  GG APQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 19  MALGGAAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 78

Query: 61  IGFIAFVSILHVMGKLYFVRREA 84
           IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 79  IGFIAFVAILHVMGKLYFVRREA 100

[Close]

BLAST of MS010329 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >XP_038875266.1 protein transport protein Sec61 subunit beta-like isoform X2 [Benincasa hispida] >KAG6582719.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020688.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GG APQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGAAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-25
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 63
          G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MS
Sbjct: 3  GSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMS 62

Query: 64 IGFIAFVSILHVMGKLYFVR 81
          IGFIAFV++LHVMGKLYFV+
Sbjct: 63 IGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-06
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRR--RSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSI 63
          GG +       A  ++RRR  R +  S T+     +M  FYTDD PG ++SP VV+ MS+
Sbjct: 15 GGRSSSNAPTGAAGALRRRPVRGSGGSGTTKAQQAAM-NFYTDDTPGWKMSPVVVITMSL 74

Query: 64 GFIAFVSILHVMGK 76
           FIAFV+ILHV+GK
Sbjct: 75 SFIAFVTILHVVGK 87

[Close]

BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISP 60
          +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P
Sbjct: 11 VGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGP 70

Query: 61 NVVLVMSIGFIAFVSILHVMGK 76
            VLVMS+ FIA V +LH+ GK
Sbjct: 71 VPVLVMSLLFIASVFMLHIWGK 92

[Close]

BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: P60468 (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISP 60
          +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P
Sbjct: 11 VGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGP 70

Query: 61 NVVLVMSIGFIAFVSILHVMGK 76
            VLVMS+ FIA V +LH+ GK
Sbjct: 71 VPVLVMSLLFIASVFMLHIWGK 92

[Close]

BLAST of MS010329 vs. ExPASy Swiss-Prot
Match: Q9CQS8 (Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b PE=1 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 4.9e-06
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISP 60
          +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P
Sbjct: 11 VGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGP 70

Query: 61 NVVLVMSIGFIAFVSILHVMGK 76
            VLVMS+ FIA V +LH+ GK
Sbjct: 71 VPVLVMSLLFIAAVFMLHIWGK 92

[Close]

BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1CT03 (Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=LOC111014017 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS
Sbjct: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFVSILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVSILHVMGKLYFVRREA 83

[Close]

BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1IH25 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472887 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GGGAPQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGGAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1GEY3 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111453574 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GGGAPQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGGAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A0A0L6Y8 (Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G117430 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GGG PQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGGGPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV++LHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. ExPASy TrEMBL
Match: A0A6J1EFZ9 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432170 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 60
          M  GG APQRGSAAATASMRRRR T+SS TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMS
Sbjct: 1  MALGGAAPQRGSAAATASMRRRR-TTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVSILHVMGKLYFVRREA 84
          IGFIAFV+ILHVMGKLYFVRREA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MS010329 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27
Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGF 63
          GGGAPQRGSAAATASMRRR+    S+++GG +G+MLQFYTDDAPGL+ISPNVVL+MSIGF
Sbjct: 3  GGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGF 62

Query: 64 IAFVSILHVMGKLYFVR 81
          IAFV++LHVMGKLYFV+
Sbjct: 63 IAFVAVLHVMGKLYFVK 79

[Close]

BLAST of MS010329 vs. TAIR 10
Match: AT3G60540.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27
Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGF 63
          GGGAPQRGSAAATASMRRR+    S+++GG +G+MLQFYTDDAPGL+ISPNVVL+MSIGF
Sbjct: 3  GGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGF 62

Query: 64 IAFVSILHVMGKLYFVR 81
          IAFV++LHVMGKLYFV+
Sbjct: 63 IAFVAVLHVMGKLYFVK 79

[Close]

BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 63
          G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MS
Sbjct: 3  GSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMS 62

Query: 64 IGFIAFVSILHVMGKLYFVR 81
          IGFIAFV++LHVMGKLYFV+
Sbjct: 63 IGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 63
          G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MS
Sbjct: 3  GSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMS 62

Query: 64 IGFIAFVSILHVMGKLYFVR 81
          IGFIAFV++LHVMGKLYFV+
Sbjct: 63 IGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MS010329 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMS 63
          G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MS
Sbjct: 3  GSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMS 62

Query: 64 IGFIAFVSILHVMGKLYFVR 81
          IGFIAFV++LHVMGKLYFV+
Sbjct: 63 IGFIAFVAVLHVMGKLYFVK 82

The following BLAST results are available for this feature:

BLAST of MS010329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144306.1	6.0e-33	100.00	protein transport protein Sec61 subunit beta-like [Momordica charantia]	[more]
XP_022950482.1	1.3e-27	89.16	protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_02297...	[more]
XP_011650635.1	4.9e-27	86.75	protein transport protein Sec61 subunit beta [Cucumis sativus]	[more]
XP_038875187.1	6.4e-27	87.95	protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]	[more]
XP_022146520.1	6.4e-27	87.95	protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_0229...	[more]

BLAST of MS010329 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38389	1.6e-25	80.00	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A8I6P9	1.3e-06	45.95	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
P60467	4.9e-06	41.46	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]
P60468	4.9e-06	41.46	Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B P...	[more]
Q9CQS8	4.9e-06	41.46	Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b ...	[more]

BLAST of MS010329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT03	2.9e-33	100.00	Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1IH25	6.2e-28	89.16	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GEY3	6.2e-28	89.16	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0L6Y8	2.4e-27	86.75	Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]
A0A6J1EFZ9	3.1e-27	87.95	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS010329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60540.1	2.3e-27	79.22	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT3G60540.2	2.3e-27	79.22	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.1	1.2e-26	80.00	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.2	1.2e-26	80.00	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.3	1.2e-26	80.00	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030671	Protein transport Sec61-beta/Sbh	PIRSF	PIRSF006398	Sec61_beta	coord: 2..81 e-value: 3.6E-27 score: 92.6
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 3..83
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 35..74 e-value: 1.5E-17 score: 63.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR13509:SF2	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA	coord: 3..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010329.1	MS010329.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005784	Sec61 translocon complex