MS009724 (gene) Bitter gourd (TR) v1

Overview


Name	MS009724
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein TRANSPARENT TESTA GLABRA 1
Location	scaffold411: 152902 .. 153918 (+)
RNA-Seq Expression	MS009724
Synteny	MS009724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCTCAAATATGGAGAACGCGGCGAAAGATTCCGGCTCGAGATCCGAATACTTGGTGACCTACGAGTCCCCCCACCCTCTGTATGCTATGGCCATCTCTTCTCGCAGTTTCCCCAATCGCATTGCCGTTGGTAGCTTCATCGAAGAGTACACCAACCGTGTCGACATTGTCTCATTCGATCCAGATTCGGTCTCCATCAAAACACATCCTTCCCTCTCCTTCGAGCACCCCTACCCACCCACCAAGCTCATCTTCAACCCCACTGCCCTCCGCAACTCTTCCGATCTCCTCGCCTCCTCCGGCGACTATCTTCGCCTCTGGGAAGTTGGAGAGACCTCTATCGAACCCGTTTCTGTTCTCAACAATAGCAAAACCAGCGAATTTTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCCGGAGAATTGGAACTTCCAGCATTGACACCACGTGTACCATTTGGGATATTGAGAAGGGCGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCGCGGGTATTTGCTTCCGTTTCTGCTGACGGCTCGGTGAGGATCTTCGACTTGAGAGATAAAGAGCACTCCACCATCATATACGAAAGCCCGCAGCCGGATACTCCTCTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATACTGATGGATAGCAACAAGGTTGTTATTCTGGACATTCGGTCCCCCAGTGTGCCGGTTGCTGAGCTAGAGAGGCATCAATCCAGCGTAAATGCAATTGCCTGGGCTCCTAGGAGTTGCAGGCATATTTGTTCCGCAGGGGATGACCGGCAGGCGCTCATTTGGGAGTTGCCTATGGTAGCAGGCCCAAATGGCATTGATCCGATGTCCATGTATTCTGCTCCACACGAAATTAACCAGCTGCAGTGGTCTGCCGCGCACCCCGATTGGATTTCTATAGCCTTTTCCAACAAAATGCAGCTTCTTAAAGTT

mRNA sequence

AAATCCTCAAATATGGAGAACGCGGCGAAAGATTCCGGCTCGAGATCCGAATACTTGGTGACCTACGAGTCCCCCCACCCTCTGTATGCTATGGCCATCTCTTCTCGCAGTTTCCCCAATCGCATTGCCGTTGGTAGCTTCATCGAAGAGTACACCAACCGTGTCGACATTGTCTCATTCGATCCAGATTCGGTCTCCATCAAAACACATCCTTCCCTCTCCTTCGAGCACCCCTACCCACCCACCAAGCTCATCTTCAACCCCACTGCCCTCCGCAACTCTTCCGATCTCCTCGCCTCCTCCGGCGACTATCTTCGCCTCTGGGAAGTTGGAGAGACCTCTATCGAACCCGTTTCTGTTCTCAACAATAGCAAAACCAGCGAATTTTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCCGGAGAATTGGAACTTCCAGCATTGACACCACGTGTACCATTTGGGATATTGAGAAGGGCGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCGCGGGTATTTGCTTCCGTTTCTGCTGACGGCTCGGTGAGGATCTTCGACTTGAGAGATAAAGAGCACTCCACCATCATATACGAAAGCCCGCAGCCGGATACTCCTCTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATACTGATGGATAGCAACAAGGTTGTTATTCTGGACATTCGGTCCCCCAGTGTGCCGGTTGCTGAGCTAGAGAGGCATCAATCCAGCGTAAATGCAATTGCCTGGGCTCCTAGGAGTTGCAGGCATATTTGTTCCGCAGGGGATGACCGGCAGGCGCTCATTTGGGAGTTGCCTATGGTAGCAGGCCCAAATGGCATTGATCCGATGTCCATGTATTCTGCTCCACACGAAATTAACCAGCTGCAGTGGTCTGCCGCGCACCCCGATTGGATTTCTATAGCCTTTTCCAACAAAATGCAGCTTCTTAAAGTT

Coding sequence (CDS)

AAATCCTCAAATATGGAGAACGCGGCGAAAGATTCCGGCTCGAGATCCGAATACTTGGTGACCTACGAGTCCCCCCACCCTCTGTATGCTATGGCCATCTCTTCTCGCAGTTTCCCCAATCGCATTGCCGTTGGTAGCTTCATCGAAGAGTACACCAACCGTGTCGACATTGTCTCATTCGATCCAGATTCGGTCTCCATCAAAACACATCCTTCCCTCTCCTTCGAGCACCCCTACCCACCCACCAAGCTCATCTTCAACCCCACTGCCCTCCGCAACTCTTCCGATCTCCTCGCCTCCTCCGGCGACTATCTTCGCCTCTGGGAAGTTGGAGAGACCTCTATCGAACCCGTTTCTGTTCTCAACAATAGCAAAACCAGCGAATTTTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCCGGAGAATTGGAACTTCCAGCATTGACACCACGTGTACCATTTGGGATATTGAGAAGGGCGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCGCGGGTATTTGCTTCCGTTTCTGCTGACGGCTCGGTGAGGATCTTCGACTTGAGAGATAAAGAGCACTCCACCATCATATACGAAAGCCCGCAGCCGGATACTCCTCTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATACTGATGGATAGCAACAAGGTTGTTATTCTGGACATTCGGTCCCCCAGTGTGCCGGTTGCTGAGCTAGAGAGGCATCAATCCAGCGTAAATGCAATTGCCTGGGCTCCTAGGAGTTGCAGGCATATTTGTTCCGCAGGGGATGACCGGCAGGCGCTCATTTGGGAGTTGCCTATGGTAGCAGGCCCAAATGGCATTGATCCGATGTCCATGTATTCTGCTCCACACGAAATTAACCAGCTGCAGTGGTCTGCCGCGCACCCCGATTGGATTTCTATAGCCTTTTCCAACAAAATGCAGCTTCTTAAAGTT

Protein sequence

KSSNMENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV

Homology

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BLAST of MS009724 vs. NCBI nr
Match: XP_022140838.1 (protein TRANSPARENT TESTA GLABRA 1 [Momordica charantia])

HSP 1 Score: 684.9 bits (1766), Expect = 3.6e-193
Identity = 334/335 (99.70%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS 64
           MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS
Sbjct: 1   MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS 60

Query: 65  VSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS 124
           +SIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS
Sbjct: 61  LSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS 120

Query: 125 KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA 184
           KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA
Sbjct: 121 KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA 180

Query: 185 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 244
           RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV
Sbjct: 181 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 240

Query: 245 ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM 304
           ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM
Sbjct: 241 ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM 300

Query: 305 SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV
Sbjct: 301 SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 335

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BLAST of MS009724 vs. NCBI nr
Match: KAG6576622.1 (Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014675.1 Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 304/343 (88.63%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           MENAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVDIVS
Sbjct: 1   MENAA----PRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGETSIE 124
           FDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++SIE
Sbjct: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120

Query: 125 PVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEV 184
           P+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180

Query: 185 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 244
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 245 LMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVA 304
           LMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVA
Sbjct: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300

Query: 305 GPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of MS009724 vs. NCBI nr
Match: XP_023551826.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 304/343 (88.63%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           MENAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVDIVS
Sbjct: 1   MENAA----PRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGETSIE 124
           FDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++SIE
Sbjct: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120

Query: 125 PVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEV 184
           P+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180

Query: 185 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 244
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 245 LMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVA 304
           LMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVA
Sbjct: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300

Query: 305 GPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

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BLAST of MS009724 vs. NCBI nr
Match: XP_022922603.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata])

HSP 1 Score: 619.4 bits (1596), Expect = 1.9e-173
Identity = 304/343 (88.63%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           MENAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVDIVS
Sbjct: 1   MENAA----PRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGETSIE 124
           FDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++SIE
Sbjct: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120

Query: 125 PVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEV 184
           P+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180

Query: 185 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 244
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 245 LMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVA 304
           LMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVA
Sbjct: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300

Query: 305 GPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of MS009724 vs. NCBI nr
Match: XP_022984362.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima])

HSP 1 Score: 615.5 bits (1586), Expect = 2.7e-172
Identity = 303/346 (87.57%), Postives = 324/346 (93.64%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVD 61
           +S M NAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVD
Sbjct: 23  NSIMANAA----PRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVD 82

Query: 62  IVSFDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGET 121
           IVSFDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++
Sbjct: 83  IVSFDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDS 142

Query: 122 SIEPVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHD 181
           SIEP+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHD
Sbjct: 143 SIEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHD 202

Query: 182 KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM 241
           KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYM
Sbjct: 203 KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYM 262

Query: 242 ATILMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELP 301
           ATILMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELP
Sbjct: 263 ATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELP 322

Query: 302 MVAGPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           MVAGPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 323 MVAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 364

[Close]

BLAST of MS009724 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.6e-159
Identity = 274/341 (80.35%), Postives = 309/341 (90.62%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISS--RSFPNRIAVGSFIEEYTNRVDIVSFDP 64
           M+N+A DS SRSE  VTY+SP+PLYAMA SS   S  +RIAVGSF+E+Y NR+DI+SFD 
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS 60

Query: 65  DSVSIKTHPSLSFEHPYPPTKLIFNPTALR--NSSDLLASSGDYLRLWEVGETS--IEPV 124
           DS+++K  P+LSFEHPYPPTKL+F+P +LR  +S DLLASSGD+LRLWE+ E S  +EP+
Sbjct: 61  DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPI 120

Query: 125 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 184
           SVLNNSKTSEFCAPLTSFDWN+VEP+R+GT SIDTTCTIWDIEK VVETQ IAHDKEV+D
Sbjct: 121 SVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHD 180

Query: 185 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 244
           IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM
Sbjct: 181 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 240

Query: 245 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGP 304
           DSNKVVILDIRSP++PVAELERHQ+SVNAIAWAP+SC+HICS GDD QALIWELP VAGP
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP 300

Query: 305 NGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           NGIDPMS+YSA  EINQLQWS++ PDWI IAF+NKMQLL+V
Sbjct: 301 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MS009724 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 2.3e-118
Identity = 210/343 (61.22%), Postives = 261/343 (76.09%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-SRSFPNRIAVGSFIEEYTNRVDIVSF 61
           S  +++ + +   RSE + TYE+P  +YAM  S  R    R+A+ S +E+Y NRV+IV  
Sbjct: 5   SDPIQDGSDEQQKRSE-IYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQL 64

Query: 62  DPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGE--TSIEPV 121
           D  +  I++ P+LSFEHPYPPTK IF P       DLLA+S D+LRLW + +  + +E  
Sbjct: 65  DESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELK 124

Query: 122 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 181
           S LN++K SEFC PLTSFDWNE EPRRIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+D
Sbjct: 125 SCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFD 184

Query: 182 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 241
           IAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+M
Sbjct: 185 IAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIM 244

Query: 242 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAG- 301
           DS KVV+LDIR P++PV EL+RHQ+SVNAIAWAP S  HIC+AGDD QALIW++  +   
Sbjct: 245 DSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQH 304

Query: 302 -PNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
              G+DP+  Y+A  EI QLQWS++ PDW++IAFS K+Q+L+V
Sbjct: 305 VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of MS009724 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.6e-117
Identity = 207/343 (60.35%), Postives = 259/343 (75.51%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-SRSFPNRIAVGSFIEEYTNRVDIVSF 61
           S  ++N +++   RSE + TYE+P  +YAM  S  R    R+A+ S IE+Y NRV+IV  
Sbjct: 5   SDQIQNGSEEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQL 64

Query: 62  DPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVG--ETSIEPV 121
           D  +  I++ P+L FEHPYPPTK  F P       DLLA+S D+LRLW +   E+ +E  
Sbjct: 65  DESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELK 124

Query: 122 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 181
           S L++ K SEF  P+TSFDWNE EPRRIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYD
Sbjct: 125 SCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYD 184

Query: 182 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 241
           IAWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M
Sbjct: 185 IAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIM 244

Query: 242 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAG- 301
            S K+V+LDIR P++PV EL+RHQ+SVNAIAWAP S  HICSAGDD QALIW++  +   
Sbjct: 245 GSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQH 304

Query: 302 -PNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
              G+DP+  Y+A  E+ QLQWS++ PDW++IAFSNK+Q+L+V
Sbjct: 305 VEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of MS009724 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-99
Identity = 187/325 (57.54%), Postives = 238/325 (73.23%), Query Frame = 0


Query: 19  LVTYESPHPLYAMAISSR-SFPNRIAVGSFIEEYTNRVDIVSFDPDSVSIKTHPSLSFEH 78
           + TY SP  +Y ++ SSR + P R+A+GSF+E+YTNRVD++  + ++   +      FEH
Sbjct: 6   IYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGFEH 65

Query: 79  PYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVG--ETSIEPVSVLNNSKTSEFCAPLTS 138
           PYPPTK ++ P    N  DLLA++GDYLRLWEVG  + SI+  S+L N   SEFCAPL+S
Sbjct: 66  PYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPLSS 125

Query: 139 FDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEAR-VFASVSADG 198
           FDWNE +P  + TSSIDTTCTIW+IE G  +TQ IAHDKEV+DIA+     +FASV ADG
Sbjct: 126 FDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADG 185

Query: 199 SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVP 258
           S+R+FDLR+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR PSVP
Sbjct: 186 SLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPSVP 245

Query: 259 VAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPMSMYSAPHEIN 318
            AEL  H+S+VN I+WAP S  HIC+  DD+QALIW+L  +  P   DP+  Y+A  EIN
Sbjct: 246 AAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNALAEIN 305

Query: 319 QLQWSAAHPDWISIAFSNKMQLLKV 340
           QL WS++ PDWI+IAFS+ +Q+LKV
Sbjct: 306 QLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of MS009724 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-95
Identity = 185/344 (53.78%), Postives = 232/344 (67.44%), Query Frame = 0


Query: 13  GSRSEYLVTYESPHPLYAMAISSRSFPN-RIAVGSFIEEYTNRVDIVSFDPDSVSIKTHP 72
           G R E +  YE+P  +YAM  S R     R+A+GSF+EEY N+V +V  D +S       
Sbjct: 5   GKRKE-IYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRN 64

Query: 73  SLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNSKTSEFCA 132
             +F+HPYP TKL++ P       DLLA+SGDYLR+W VGET      +LNN+K S+FCA
Sbjct: 65  --TFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCA 124

Query: 133 PLTSFDWNEVEPRRIGTSSIDTTCTIWDIE-----------KGVVETQFIAHDKEVYDIA 192
           PLTSFDWNEV+P  +GTSSIDTTCTIW +E            G V+TQ IAHDKEVYDIA
Sbjct: 125 PLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA 184

Query: 193 WGEA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 252
           +  A     +FASV ADGSVR+FDLR  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+
Sbjct: 185 FSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATM 244

Query: 253 LMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVA 312
            MD  +VVILD+R P  PVA L  H++ VN IAWAP S  HIC+A DD QALIW++  + 
Sbjct: 245 AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM- 304

Query: 313 GPNGI-DPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
            P  I DP+  Y+A  EIN +QW++  PDWI+I ++N +++L+V
Sbjct: 305 -PRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of MS009724 vs. ExPASy TrEMBL
Match: A0A6J1CIX6 (protein TRANSPARENT TESTA GLABRA 1 OS=Momordica charantia OX=3673 GN=LOC111011408 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.7e-193
Identity = 334/335 (99.70%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS 64
           MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS
Sbjct: 1   MENAAKDSGSRSEYLVTYESPHPLYAMAISSRSFPNRIAVGSFIEEYTNRVDIVSFDPDS 60

Query: 65  VSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS 124
           +SIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS
Sbjct: 61  LSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVSVLNNS 120

Query: 125 KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA 184
           KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA
Sbjct: 121 KTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDIAWGEA 180

Query: 185 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 244
           RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV
Sbjct: 181 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 240

Query: 245 ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM 304
           ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM
Sbjct: 241 ILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPNGIDPM 300

Query: 305 SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV
Sbjct: 301 SMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 335

[Close]

BLAST of MS009724 vs. ExPASy TrEMBL
Match: A0A6J1E766 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 9.0e-174
Identity = 304/343 (88.63%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           MENAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVDIVS
Sbjct: 1   MENAA----PRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGETSIE 124
           FDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++SIE
Sbjct: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120

Query: 125 PVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEV 184
           P+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180

Query: 185 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 244
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 245 LMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVA 304
           LMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVA
Sbjct: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300

Query: 305 GPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of MS009724 vs. ExPASy TrEMBL
Match: A0A6J1J1Z4 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita maxima OX=3661 GN=LOC111482686 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.3e-172
Identity = 303/346 (87.57%), Postives = 324/346 (93.64%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVD 61
           +S M NAA     RSE++ TY+SPHPLYAMAIS     SR+FPNRIA+GSFIE+ TNRVD
Sbjct: 23  NSIMANAA----PRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVD 82

Query: 62  IVSFDPDSVSIKTHPSLSFEHPYPPTKLIFNPTA---LRNSSDLLASSGDYLRLWEVGET 121
           IVSFDPDS+SI+THPSLSF+HPYPPTKL+FNP A   LRNSSD+LASSGDYLRLW+VG++
Sbjct: 83  IVSFDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDS 142

Query: 122 SIEPVSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHD 181
           SIEP+SVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHD
Sbjct: 143 SIEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHD 202

Query: 182 KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM 241
           KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYM
Sbjct: 203 KEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYM 262

Query: 242 ATILMDSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELP 301
           ATILMDSNKVVILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELP
Sbjct: 263 ATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELP 322

Query: 302 MVAGPNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           MVAGPNGIDPMSMYSA HEINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 323 MVAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 364

[Close]

BLAST of MS009724 vs. ExPASy TrEMBL
Match: B7SBL6 (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.8e-166
Identity = 293/340 (86.18%), Postives = 315/340 (92.65%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           ME+AA    SRSE+L TYESPHPLYAMAIS     S +F +RIA+GSF+EEY NRVDIVS
Sbjct: 1   MEHAA----SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVS 124
           FDPDS+SIK +PSLSFEHPYPPTKL+FNP+ L   S LLASSGD LRLW++G++SIEP+S
Sbjct: 61  FDPDSISIKANPSLSFEHPYPPTKLMFNPSPL---SSLLASSGDSLRLWKLGDSSIEPLS 120

Query: 125 VLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDI 184
           +LNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWDIEK VVETQFIAHDKEVYDI
Sbjct: 121 LLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 180

Query: 185 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 244
           AWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD
Sbjct: 181 AWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 240

Query: 245 SNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPN 304
           SNK+VILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVAGPN
Sbjct: 241 SNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN 300

Query: 305 GIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GIDPMSMYSA  EINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 301 GIDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of MS009724 vs. ExPASy TrEMBL
Match: A0A5D3BFF9 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00330 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.4e-166
Identity = 295/340 (86.76%), Postives = 315/340 (92.65%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAIS-----SRSFPNRIAVGSFIEEYTNRVDIVS 64
           MENAA    SRSE+L TY+SPHPLYAMAIS     S +F +RIA+GSF+EEY NRVDIVS
Sbjct: 89  MENAA----SRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 148

Query: 65  FDPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGETSIEPVS 124
           FDPDSVSIKT+PSLSFEHPYPPTKL+FNP+ L   S LLASSGD LRLW+VG++SIEP+S
Sbjct: 149 FDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPL---SSLLASSGDSLRLWKVGDSSIEPLS 208

Query: 125 VLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYDI 184
           +LNNSKTSEFCAPLTSFDWNEVE +RIGTSSIDTTCTIWDIEK VVETQFIAHDKEVYDI
Sbjct: 209 LLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 268

Query: 185 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 244
           AWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD
Sbjct: 269 AWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 328

Query: 245 SNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGPN 304
           SNK+VILDIRSPSVPVAELERH SSVNAIAWAPRSCRHICSAGDD+QALIWELPMVAGPN
Sbjct: 329 SNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN 388

Query: 305 GIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           GIDPMSMYSA  EINQLQWSAA PDWI++AFSNKMQLLKV
Sbjct: 389 GIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of MS009724 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-160
Identity = 274/341 (80.35%), Postives = 309/341 (90.62%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISS--RSFPNRIAVGSFIEEYTNRVDIVSFDP 64
           M+N+A DS SRSE  VTY+SP+PLYAMA SS   S  +RIAVGSF+E+Y NR+DI+SFD 
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS 60

Query: 65  DSVSIKTHPSLSFEHPYPPTKLIFNPTALR--NSSDLLASSGDYLRLWEVGETS--IEPV 124
           DS+++K  P+LSFEHPYPPTKL+F+P +LR  +S DLLASSGD+LRLWE+ E S  +EP+
Sbjct: 61  DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPI 120

Query: 125 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 184
           SVLNNSKTSEFCAPLTSFDWN+VEP+R+GT SIDTTCTIWDIEK VVETQ IAHDKEV+D
Sbjct: 121 SVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHD 180

Query: 185 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 244
           IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM
Sbjct: 181 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 240

Query: 245 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGP 304
           DSNKVVILDIRSP++PVAELERHQ+SVNAIAWAP+SC+HICS GDD QALIWELP VAGP
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP 300

Query: 305 NGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           NGIDPMS+YSA  EINQLQWS++ PDWI IAF+NKMQLL+V
Sbjct: 301 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MS009724 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-160
Identity = 274/341 (80.35%), Postives = 309/341 (90.62%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISS--RSFPNRIAVGSFIEEYTNRVDIVSFDP 64
           M+N+A DS SRSE  VTY+SP+PLYAMA SS   S  +RIAVGSF+E+Y NR+DI+SFD 
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS 60

Query: 65  DSVSIKTHPSLSFEHPYPPTKLIFNPTALR--NSSDLLASSGDYLRLWEVGETS--IEPV 124
           DS+++K  P+LSFEHPYPPTKL+F+P +LR  +S DLLASSGD+LRLWE+ E S  +EP+
Sbjct: 61  DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPI 120

Query: 125 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 184
           SVLNNSKTSEFCAPLTSFDWN+VEP+R+GT SIDTTCTIWDIEK VVETQ IAHDKEV+D
Sbjct: 121 SVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHD 180

Query: 185 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 244
           IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM
Sbjct: 181 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 240

Query: 245 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGP 304
           DSNKVVILDIRSP++PVAELERHQ+SVNAIAWAP+SC+HICS GDD QALIWELP VAGP
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP 300

Query: 305 NGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           NGIDPMS+YSA  EINQLQWS++ PDWI IAF+NKMQLL+V
Sbjct: 301 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MS009724 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-160
Identity = 274/341 (80.35%), Postives = 309/341 (90.62%), Query Frame = 0


Query: 5   MENAAKDSGSRSEYLVTYESPHPLYAMAISS--RSFPNRIAVGSFIEEYTNRVDIVSFDP 64
           M+N+A DS SRSE  VTY+SP+PLYAMA SS   S  +RIAVGSF+E+Y NR+DI+SFD 
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS 60

Query: 65  DSVSIKTHPSLSFEHPYPPTKLIFNPTALR--NSSDLLASSGDYLRLWEVGETS--IEPV 124
           DS+++K  P+LSFEHPYPPTKL+F+P +LR  +S DLLASSGD+LRLWE+ E S  +EP+
Sbjct: 61  DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPI 120

Query: 125 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 184
           SVLNNSKTSEFCAPLTSFDWN+VEP+R+GT SIDTTCTIWDIEK VVETQ IAHDKEV+D
Sbjct: 121 SVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHD 180

Query: 185 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 244
           IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM
Sbjct: 181 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 240

Query: 245 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAGP 304
           DSNKVVILDIRSP++PVAELERHQ+SVNAIAWAP+SC+HICS GDD QALIWELP VAGP
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP 300

Query: 305 NGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
           NGIDPMS+YSA  EINQLQWS++ PDWI IAF+NKMQLL+V
Sbjct: 301 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MS009724 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-119
Identity = 210/343 (61.22%), Postives = 261/343 (76.09%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-SRSFPNRIAVGSFIEEYTNRVDIVSF 61
           S  +++ + +   RSE + TYE+P  +YAM  S  R    R+A+ S +E+Y NRV+IV  
Sbjct: 5   SDPIQDGSDEQQKRSE-IYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQL 64

Query: 62  DPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVGE--TSIEPV 121
           D  +  I++ P+LSFEHPYPPTK IF P       DLLA+S D+LRLW + +  + +E  
Sbjct: 65  DESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELK 124

Query: 122 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 181
           S LN++K SEFC PLTSFDWNE EPRRIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+D
Sbjct: 125 SCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFD 184

Query: 182 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 241
           IAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+M
Sbjct: 185 IAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIM 244

Query: 242 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAG- 301
           DS KVV+LDIR P++PV EL+RHQ+SVNAIAWAP S  HIC+AGDD QALIW++  +   
Sbjct: 245 DSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQH 304

Query: 302 -PNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
              G+DP+  Y+A  EI QLQWS++ PDW++IAFS K+Q+L+V
Sbjct: 305 VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of MS009724 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 423.3 bits (1087), Expect = 1.8e-118
Identity = 207/343 (60.35%), Postives = 259/343 (75.51%), Query Frame = 0


Query: 2   SSNMENAAKDSGSRSEYLVTYESPHPLYAMAIS-SRSFPNRIAVGSFIEEYTNRVDIVSF 61
           S  ++N +++   RSE + TYE+P  +YAM  S  R    R+A+ S IE+Y NRV+IV  
Sbjct: 5   SDQIQNGSEEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQL 64

Query: 62  DPDSVSIKTHPSLSFEHPYPPTKLIFNPTALRNSSDLLASSGDYLRLWEVG--ETSIEPV 121
           D  +  I++ P+L FEHPYPPTK  F P       DLLA+S D+LRLW +   E+ +E  
Sbjct: 65  DESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELK 124

Query: 122 SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDIEKGVVETQFIAHDKEVYD 181
           S L++ K SEF  P+TSFDWNE EPRRIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYD
Sbjct: 125 SCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYD 184

Query: 182 IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 241
           IAWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M
Sbjct: 185 IAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIM 244

Query: 242 DSNKVVILDIRSPSVPVAELERHQSSVNAIAWAPRSCRHICSAGDDRQALIWELPMVAG- 301
            S K+V+LDIR P++PV EL+RHQ+SVNAIAWAP S  HICSAGDD QALIW++  +   
Sbjct: 245 GSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQH 304

Query: 302 -PNGIDPMSMYSAPHEINQLQWSAAHPDWISIAFSNKMQLLKV 340
              G+DP+  Y+A  E+ QLQWS++ PDW++IAFSNK+Q+L+V
Sbjct: 305 VEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

The following BLAST results are available for this feature:

BLAST of MS009724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140838.1	3.6e-193	99.70	protein TRANSPARENT TESTA GLABRA 1 [Momordica charantia]	[more]
KAG6576622.1	1.4e-173	88.63	Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023551826.1	1.4e-173	88.63	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022922603.1	1.9e-173	88.63	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata]	[more]
XP_022984362.1	2.7e-172	87.57	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima]	[more]

BLAST of MS009724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGN1	1.6e-159	80.35	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q9LPV9	2.3e-118	61.22	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	2.6e-117	60.35	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q552R1	1.1e-99	57.54	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	2.1e-95	53.78	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of MS009724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIX6	1.7e-193	99.70	protein TRANSPARENT TESTA GLABRA 1 OS=Momordica charantia OX=3673 GN=LOC11101140...	[more]
A0A6J1E766	9.0e-174	88.63	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561...	[more]
A0A6J1J1Z4	1.3e-172	87.57	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita maxima OX=3661 GN=LOC111482686 P...	[more]
B7SBL6	1.8e-166	86.18	WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1	[more]
A0A5D3BFF9	2.4e-166	86.76	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of MS009724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24520.1	1.1e-160	80.35	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	1.1e-160	80.35	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	1.1e-160	80.35	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	1.6e-119	61.22	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	1.8e-118	60.35	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 114..159 e-value: 0.66 score: 18.2 coord: 251..291 e-value: 4.7E-6 score: 36.1 coord: 68..109 e-value: 150.0 score: 3.2 coord: 162..200 e-value: 1.0E-4 score: 31.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 168..200 e-value: 0.087 score: 13.7 coord: 254..290 e-value: 0.029 score: 15.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 258..292 score: 10.107432
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..209 score: 9.439068
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 49..339 e-value: 5.9E-39 score: 136.2
IPR031104	Protein TRANSPARENT TESTA GLABRA 1	PANTHER	PTHR19919:SF10	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 5..339
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 5..339
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 258..292 score: 8.518333
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 278..292
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 25..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009724.1	MS009724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding