MS007896 (gene) Bitter gourd (TR) v1

Overview


Name	MS007896
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	chromo domain-containing protein LHP1-like
Location	scaffold13: 2180233 .. 2183474 (+)
RNA-Seq Expression	MS007896
Synteny	MS007896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTCGTGGGTTCAATTCACGACGCCATGGATGGCGGTGAACTTCATCTCCATGGAGGCGACTCGGATTGCGCTAATGTGAACAGCAGCAGCAACCCCATTAATGGCGCTTCATCATCCGCCGCTCCTTCGACTTCCCATTTATCGGACACCCACCAAGAGCAAAACCTAGAAGAGGCCGAAGACGATGCCGAAGGAGACGAAGAAGATGAACAGGAGGGAGACGAGCATGATTTTTCTGCTCCTGCTTCTGAGAGAACCAATCTCGATGAGGGCTTCTTTGAAATTGAAGCCATCCGCCGAAAAAGGGTTCGCAAGGTATGCTCTCATTTTCGATTTACCTGAAGTTTCCCTAAACTTTTTGCCCCTTTTGGATTGAGAGAATGATGGGTTTCTGAATTTTTGTTCATTTACTGATATTGGGTGTTCTTGATTCCAACAAAAACAGGGCCAGCTTCAGTACTTGATCAAATGGTGAGTGTTCCCCTCCATTGTTTGTTTACTTTGGTTTCTTAGAGCTTGACTGTGATATAAATTCGGATTACTAACCAAACTGAAATTTACTGAAGGCGTGGCTGGCCGGAGACAGCTAATACCTGGGAGCCCTTGGAGAATCTCCAGTCGTGCTCTGAGTTCATCGAGGCATTCGAGCATAGGTATGGTATTCTCTCTTTTTTGTTGGTAGCTGGAAGAAGCATTCTTTGGCATGTTATGCTGATTGTTGTGATGGTTTCTTGTCAAGTCTATATGATCTAATGTTGTTGAACTTGTGTCTTTTGAAGGCTAACGACGGGGAAGCGGAAGCGGAAGCGAAAACATGGGGTTGTTCATACTCAGACCAAGAAGAGGCAGCATCGAGACAACTTTTCTACTTACAATGTCACCGATGTCGAAATCAGCGTTGTTGATCAGCGTCTGCCCTCTGCTCCTATAAACATGTCTAGCTTTACTCATCCTTATGTTCATTCTCAATCTGTAGTTTGTAATCACGAAGGAGAAAAGAATGGAGATGTGACTGCTATCGAGAGAGCCAAGCAAACCGATATTGATAATGTAGGCAGGAATCTACCTCTACGATTTGACCGAAAGAAAGACGAACGTGAGTATGATCCCAAGCTCAGTGAGCTCAAGGCAACAGTATTAACCAACATAGCCATTACCGATAAACTTGCGATAAATTTTCAAGAAGGCAGGACATCAGAGAATAACAGTCCTGCAGCTGGTCTTTCTAAAAGTGTTCCTGTGGAACCCATTTCCGAAAATCGGTGCACCGGAGCTAAGAGAAGGAAGTCCGGTTCGGTTAAAAGGTTTAGACAAGAGTCAACTATATCTGAACTGCCTATGGCTCAAAATGCAGAATTGACATTGGCTGTAGTAGACTCTGGTGTTGGAGTGGAACCAATGGGGGTTGAGAATTCTGGATATCACGGGGAGAGTTTAAGTCGCAATAACAAGACCGATGAAGCGAGGAACGAGCCGAGTATCATCAAGATTATCAAACCGTTAGGCTATTCGGCATCTGTGTCGAACAACATTCAGGATGTTTTGGTCACTTTTGTGGCTATGAGGTATGTGCTTTGTCCTTCTTTTAGTTTAATGGTAAATATACTTCTCAACCATATTTTTAGACTATCTGTTCTTCCAAAGCAAAGGATAGGGGTGTAAGCAAGTTAGTCCAGGTCAGTTTTTGGTTGAGGTCAACATATCGGTTTAAGAAAAATCAAAAGTTGATGCTGAACCAACGAAACCGATGTTGAAACCGGTATTTTAATCGATTTTCTGGGAACAGTTTGAAATTAAGTTTAAAAACATCCATAGTACAGTTGTCTGAAGTTTATAATTATTTTGTTTTTTAAAAACGATGGGTTTCACCCATTAATTTCTTTGTTTTGTTATCCATATTTTAAAAACATTTTCAAAATCTAAGCTAAATTTTTTAAAACTAAAGGTAGTCATTAAAATCTTGTTTGGTTGTTTTTGAACTTGCTAAGAAATCATTATCAAATGGAGCCTCAGGTTCTAGATTTTCAATTTCACCGATCTATAATCAGATGTAGCTCTCTCTTATTTTTCCTTTTCCCCTAATTCCTATTTCTCATTTCATCATTTTAGGTTTTTTATGTTCTGCATGTTATGTATTTCTTTTTTGGACTTGTTTCTAAAGCTATGAATTACTTCTTTAACCATAAGATACATTTTTCCAGCGAGAGGCAAGCTGTAATGTGGTAGCTCTCTAGGGGAGGGTCTCCTCGGTCGTTGCCCGTAGGCTGTTCTCTTCTTTTGGTTTAATATGTTCTGTTTCTTATAGAAAAAAAAAAGTATTTTCTTGTTTTTTATATATGGTGTGTGATTATTTGATTGAAAGCTCTTATCCTTTCATTTTAATCGGGGAAATTAAACATTTTCACATTTTTCACAATTTTCAAGTTTGATCTTTTCAAACCATGATGACCATCTATCTAGGATTTAATATCCTATGAATTTTCTTGTCAACCAAATGTAGTAGGTTCAAGTGGCTGGCCATGATTAGTCGAGGTGTCCACAAATTGGCCCAGATGCACGGATATCGAAAAAAAAGTTTGATCTTATTTTTTACTTTTTATTTTTTGAGGAATTGTGAGTGTTCGGATAGCCCATACTCACCTTGACTAGTCTCATAAGACAAACTACTAAACGTACGACCTTTGGTGGTAGAAACTCATGGGATTTAAATATTGTAAGGATATTCCATTGAGCTTTTAAACTTGCCATTTCGATCAATGGGTGAATCGGTTGTGGGTTATTTATTCAAAATCATGTTCAAACTTGAAACTCCTTTCTCATTGATCCTTTAAAATTTGTTTCTTTTCCCATTGGGGTTTAAATATTATCTCTGTGCCTGAACCAATTTGTGATTGCAATGGAAATTATGAAAATGTTTCTAAGCGCCTCATCTTTTTTTACATTTTCTCCATTTTATTAAAATGAATCTTGTGTTAGCTTTCATATTCTTGAATGACTTTATTTTTTTGGTTTCCTCGGTTATAGGTCCGATGGAACAGAAGTGATGGTCGATAACAAGTTCCTCAAGGCTAACAATCCACTGCTGGTAATTGGTTATCCTATTCTTCAGTGTTATATATATGCTTTTGAACTGCCTTAAACAAATGCTCAATTGTTTTCCCTCTGATTCTAACCGCGGTGTTAACTAATATCAGTTGATCAACTTTTACGAGCAACATCTCCGCTATACTCCCAGATCA

mRNA sequence

GTGGTCGTGGGTTCAATTCACGACGCCATGGATGGCGGTGAACTTCATCTCCATGGAGGCGACTCGGATTGCGCTAATGTGAACAGCAGCAGCAACCCCATTAATGGCGCTTCATCATCCGCCGCTCCTTCGACTTCCCATTTATCGGACACCCACCAAGAGCAAAACCTAGAAGAGGCCGAAGACGATGCCGAAGGAGACGAAGAAGATGAACAGGAGGGAGACGAGCATGATTTTTCTGCTCCTGCTTCTGAGAGAACCAATCTCGATGAGGGCTTCTTTGAAATTGAAGCCATCCGCCGAAAAAGGGTTCGCAAGGGCCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACAGCTAATACCTGGGAGCCCTTGGAGAATCTCCAGTCGTGCTCTGAGTTCATCGAGGCATTCGAGCATAGGCTAACGACGGGGAAGCGGAAGCGGAAGCGAAAACATGGGGTTGTTCATACTCAGACCAAGAAGAGGCAGCATCGAGACAACTTTTCTACTTACAATGTCACCGATGTCGAAATCAGCGTTGTTGATCAGCGTCTGCCCTCTGCTCCTATAAACATGTCTAGCTTTACTCATCCTTATGTTCATTCTCAATCTGTAGTTTGTAATCACGAAGGAGAAAAGAATGGAGATGTGACTGCTATCGAGAGAGCCAAGCAAACCGATATTGATAATGTAGGCAGGAATCTACCTCTACGATTTGACCGAAAGAAAGACGAACGTGAGTATGATCCCAAGCTCAGTGAGCTCAAGGCAACAGTATTAACCAACATAGCCATTACCGATAAACTTGCGATAAATTTTCAAGAAGGCAGGACATCAGAGAATAACAGTCCTGCAGCTGGTCTTTCTAAAAGTGTTCCTGTGGAACCCATTTCCGAAAATCGGTGCACCGGAGCTAAGAGAAGGAAGTCCGGTTCGGTTAAAAGGTTTAGACAAGAGTCAACTATATCTGAACTGCCTATGGCTCAAAATGCAGAATTGACATTGGCTGTAGTAGACTCTGGTGTTGGAGTGGAACCAATGGGGGTTGAGAATTCTGGATATCACGGGGAGAGTTTAAGTCGCAATAACAAGACCGATGAAGCGAGGAACGAGCCGAGTATCATCAAGATTATCAAACCGTTAGGCTATTCGGCATCTGTGTCGAACAACATTCAGGATGTTTTGGTCACTTTTGTGGCTATGAGGTCCGATGGAACAGAAGTGATGGTCGATAACAAGTTCCTCAAGGCTAACAATCCACTGCTGTTGATCAACTTTTACGAGCAACATCTCCGCTATACTCCCAGATCA

Coding sequence (CDS)

GTGGTCGTGGGTTCAATTCACGACGCCATGGATGGCGGTGAACTTCATCTCCATGGAGGCGACTCGGATTGCGCTAATGTGAACAGCAGCAGCAACCCCATTAATGGCGCTTCATCATCCGCCGCTCCTTCGACTTCCCATTTATCGGACACCCACCAAGAGCAAAACCTAGAAGAGGCCGAAGACGATGCCGAAGGAGACGAAGAAGATGAACAGGAGGGAGACGAGCATGATTTTTCTGCTCCTGCTTCTGAGAGAACCAATCTCGATGAGGGCTTCTTTGAAATTGAAGCCATCCGCCGAAAAAGGGTTCGCAAGGGCCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACAGCTAATACCTGGGAGCCCTTGGAGAATCTCCAGTCGTGCTCTGAGTTCATCGAGGCATTCGAGCATAGGCTAACGACGGGGAAGCGGAAGCGGAAGCGAAAACATGGGGTTGTTCATACTCAGACCAAGAAGAGGCAGCATCGAGACAACTTTTCTACTTACAATGTCACCGATGTCGAAATCAGCGTTGTTGATCAGCGTCTGCCCTCTGCTCCTATAAACATGTCTAGCTTTACTCATCCTTATGTTCATTCTCAATCTGTAGTTTGTAATCACGAAGGAGAAAAGAATGGAGATGTGACTGCTATCGAGAGAGCCAAGCAAACCGATATTGATAATGTAGGCAGGAATCTACCTCTACGATTTGACCGAAAGAAAGACGAACGTGAGTATGATCCCAAGCTCAGTGAGCTCAAGGCAACAGTATTAACCAACATAGCCATTACCGATAAACTTGCGATAAATTTTCAAGAAGGCAGGACATCAGAGAATAACAGTCCTGCAGCTGGTCTTTCTAAAAGTGTTCCTGTGGAACCCATTTCCGAAAATCGGTGCACCGGAGCTAAGAGAAGGAAGTCCGGTTCGGTTAAAAGGTTTAGACAAGAGTCAACTATATCTGAACTGCCTATGGCTCAAAATGCAGAATTGACATTGGCTGTAGTAGACTCTGGTGTTGGAGTGGAACCAATGGGGGTTGAGAATTCTGGATATCACGGGGAGAGTTTAAGTCGCAATAACAAGACCGATGAAGCGAGGAACGAGCCGAGTATCATCAAGATTATCAAACCGTTAGGCTATTCGGCATCTGTGTCGAACAACATTCAGGATGTTTTGGTCACTTTTGTGGCTATGAGGTCCGATGGAACAGAAGTGATGGTCGATAACAAGTTCCTCAAGGCTAACAATCCACTGCTGTTGATCAACTTTTACGAGCAACATCTCCGCTATACTCCCAGATCA

Protein sequence

VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEAEDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHRLTTGKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDVEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLLINFYEQHLRYTPRS

Homology

[Close]

BLAST of MS007896 vs. NCBI nr
Match: XP_022155759.1 (chromo domain-containing protein LHP1-like [Momordica charantia])

HSP 1 Score: 842.4 bits (2175), Expect = 1.8e-240
Identity = 437/441 (99.09%), Postives = 437/441 (99.09%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VVVGSIHDAMDGGELHLHGGDS CANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA
Sbjct: 20  VVVGSIHDAMDGGELHLHGGDSYCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 79

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 80  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 139

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV 180
           TANTWEPLENLQSCSEFIEAFEHRLT GKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV
Sbjct: 140 TANTWEPLENLQSCSEFIEAFEHRLTMGKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV 199

Query: 181 EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLP 240
           EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNG VTAIERAKQTDIDNVGRNLP
Sbjct: 200 EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGAVTAIERAKQTDIDNVGRNLP 259

Query: 241 LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVEP 300
           LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSV VEP
Sbjct: 260 LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVAVEP 319

Query: 301 ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG 360
           ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG
Sbjct: 320 ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG 379

Query: 361 ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK 420
           ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK
Sbjct: 380 ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK 439

Query: 421 ANNPLLLINFYEQHLRYTPRS 442
           ANNPLLLINFYEQHLRYTPRS
Sbjct: 440 ANNPLLLINFYEQHLRYTPRS 460

[Close]

BLAST of MS007896 vs. NCBI nr
Match: XP_038874378.1 (chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo domain-containing protein LHP1 [Benincasa hispida])

HSP 1 Score: 662.5 bits (1708), Expect = 2.5e-186
Identity = 352/444 (79.28%), Postives = 391/444 (88.06%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VVVGS  DAMDGGE  +HGGDSD ANVN+++NPIN     + PSTSHL +T Q+QNLEE 
Sbjct: 18  VVVGSAQDAMDGGE--VHGGDSDYANVNTNNNPIN----VSEPSTSHLLETDQDQNLEEP 77

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           +DD EGDEEDEQ+GD+  F   A++RTNLD+GF+EIEAIRR+RVRKGQLQYLIKWRGWPE
Sbjct: 78  DDDGEGDEEDEQDGDDAAF---AAQRTNLDDGFYEIEAIRRRRVRKGQLQYLIKWRGWPE 137

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQH--RDNFSTYNV 180
           TANTWEPLENL +CS+FIEAFE  L  GK RKRKRKHGVVHTQTKKRQH  R +FSTYNV
Sbjct: 138 TANTWEPLENLHTCSDFIEAFEQSLMMGKQRKRKRKHGVVHTQTKKRQHQQRASFSTYNV 197

Query: 181 TDVEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGR 240
           TDVEISVVDQRLPSAP+NMSS T+PY HSQS+V NHEGEKNGDVT IER KQ DIDN+GR
Sbjct: 198 TDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTTIERGKQADIDNIGR 257

Query: 241 NLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVP 300
           N   R + KKDE EYDPKLSELK TVLTNIAI DKLAINFQ+ RT+ENN  AAGL K   
Sbjct: 258 NATQRSEWKKDEHEYDPKLSELKTTVLTNIAIGDKLAINFQDARTTENNGSAAGLYKGGS 317

Query: 301 VEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSG 360
           VEP+++NRCTGA+RRKSGSVKRFRQ+ST+S++PM+QNAELTLAVV+SGV VEP+GVENSG
Sbjct: 318 VEPVTDNRCTGARRRKSGSVKRFRQDSTLSDMPMSQNAELTLAVVESGVRVEPIGVENSG 377

Query: 361 YHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNK 420
           YHGESLSRNN+TD+ARNE SIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEV+VDNK
Sbjct: 378 YHGESLSRNNRTDDARNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVVVDNK 437

Query: 421 FLKANNPLLLINFYEQHLRYTPRS 442
           FLKANNPLLLINFYEQHLRYT RS
Sbjct: 438 FLKANNPLLLINFYEQHLRYTTRS 452

[Close]

BLAST of MS007896 vs. NCBI nr
Match: KAG7013388.1 (Chromo domain-containing protein LHP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 654.1 bits (1686), Expect = 8.8e-184
Identity = 350/442 (79.19%), Postives = 385/442 (87.10%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VV+GSI DAMDGGE  +HGGDSD  ++N+++NPING      PSTSHLS THQEQNL+E 
Sbjct: 18  VVMGSIQDAMDGGE--VHGGDSDYVDMNTNNNPINGGE----PSTSHLSKTHQEQNLDEP 77

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           +   E DE+DEQ+G E  F A   +RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 78  D---EQDEQDEQDGTEAAFDA---QRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPE 137

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQHRDNFSTYNVTD 180
           TANTWEPLENL +CSEFIEAFE  L +GK RKRKRKHGVVH QTKKRQ R NFSTYNVTD
Sbjct: 138 TANTWEPLENLHTCSEFIEAFEQSLISGKQRKRKRKHGVVHVQTKKRQQRANFSTYNVTD 197

Query: 181 VEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNL 240
           VEISVVDQRLPSAPIN+ S T+PY  S+SVV NHEGEKNGDVTAIER +  DIDN GRN 
Sbjct: 198 VEISVVDQRLPSAPINIPSLTNPYARSRSVVYNHEGEKNGDVTAIERGRLADIDNAGRNA 257

Query: 241 PLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVE 300
             RF++KK E EYDPKLSELKATVLTNIAI DKLAI+F + RT+ENN PAAGLSK+  VE
Sbjct: 258 TQRFEQKKAEHEYDPKLSELKATVLTNIAIGDKLAIDFHDARTTENNVPAAGLSKTGSVE 317

Query: 301 PISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYH 360
            ++ENRCTGAKRRKSGSVKRFRQ+ST+SELP+ QN ELTLAVV+SGVGVEP+GVENSGYH
Sbjct: 318 LVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESGVGVEPIGVENSGYH 377

Query: 361 GESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 420
           GESLSRNN+TDEARNEPSIIKI+KPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL
Sbjct: 378 GESLSRNNRTDEARNEPSIIKIVKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 437

Query: 421 KANNPLLLINFYEQHLRYTPRS 442
           KANNPLLLINFYEQHL YT RS
Sbjct: 438 KANNPLLLINFYEQHLHYTTRS 447

[Close]

BLAST of MS007896 vs. NCBI nr
Match: XP_008460094.1 (PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo])

HSP 1 Score: 652.9 bits (1683), Expect = 2.0e-183
Identity = 350/445 (78.65%), Postives = 389/445 (87.42%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VVVGSI DAMD GE  +HGG+SD AN N ++NPING+     PS SHL++THQ+QNLEE 
Sbjct: 19  VVVGSIQDAMDSGE--VHGGNSDYANANINNNPINGSE----PSNSHLTETHQDQNLEEP 78

Query: 61  -EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWP 120
            +DD EGDEEDEQ+GDE  F   AS+RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWP
Sbjct: 79  DDDDGEGDEEDEQDGDEAAF---ASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWP 138

Query: 121 ETANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQH--RDNFSTYN 180
           E ANTWEPLENL +CS+FIEAFE  L TGK RKRKRKHGVVHTQTKKRQH  R +FS YN
Sbjct: 139 EAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQQRGSFSAYN 198

Query: 181 VTDVEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVG 240
           VTDVEISVVDQRLPSAP+N+SS T+PY HSQS+V NHEGEKNGDVTAIER KQTDIDN+G
Sbjct: 199 VTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERGKQTDIDNMG 258

Query: 241 RNLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSV 300
           RN   R + KKDE EYDPKLSELKATVLTNIA+TDK  IN Q+ RT+ENN  AAGLSK  
Sbjct: 259 RNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNGSAAGLSKGA 318

Query: 301 PVEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENS 360
            VEP+++NRCTGA+RRKSGSV+RFR +ST+SELP +Q+AELTLAVV+SGV VEP+GVENS
Sbjct: 319 FVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVRVEPIGVENS 378

Query: 361 GYHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDN 420
           GYHGESLSRNNKTD+ARNE SIIKIIKPLGYSASVSNN+QDVLVTFVAMRSDGTEV+VDN
Sbjct: 379 GYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDN 438

Query: 421 KFLKANNPLLLINFYEQHLRYTPRS 442
           KFLKA NPLLLINFYEQHLRYT RS
Sbjct: 439 KFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of MS007896 vs. NCBI nr
Match: KAG6574806.1 (Chromo domain-containing protein LHP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 650.2 bits (1676), Expect = 1.3e-182
Identity = 349/442 (78.96%), Postives = 384/442 (86.88%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VV+GSI DAMDGGE  +HGGDSD  ++N+++NPING      PSTSHLS THQEQNL+E 
Sbjct: 18  VVMGSIQDAMDGGE--VHGGDSDYVDMNTNNNPINGGE----PSTSHLSKTHQEQNLDEP 77

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           +   E DE+DEQ+G E  F A   +RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 78  D---EQDEQDEQDGTEAAFDA---QRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPE 137

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQHRDNFSTYNVTD 180
           TANTWEPLENL +CSEFIEAFE  L +GK RKRKRKHGVVH QTKKRQ R NFSTYNVTD
Sbjct: 138 TANTWEPLENLHTCSEFIEAFEQSLISGKQRKRKRKHGVVHVQTKKRQQRANFSTYNVTD 197

Query: 181 VEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNL 240
           VEISVVDQRLPSAPIN+ S T+PY  S+SVV NHEGEKNGDVTAIER +  DIDN GRN 
Sbjct: 198 VEISVVDQRLPSAPINIPSLTNPYARSRSVVYNHEGEKNGDVTAIERGRLADIDNAGRNA 257

Query: 241 PLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVE 300
             RF++KK E EYD KLSELKATVLTNIAI DKLAI+F + RT+ENN PAAGLSK+  VE
Sbjct: 258 TQRFEQKKAEHEYDLKLSELKATVLTNIAIGDKLAIDFHDARTTENNVPAAGLSKTGSVE 317

Query: 301 PISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYH 360
            ++ENRCTGAKRRKSGSVKRFRQ+ST+SELP+ QN ELTLAVV+SGVGVEP+GVENSGYH
Sbjct: 318 LVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESGVGVEPIGVENSGYH 377

Query: 361 GESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 420
           GESLSRNN+TDEARNEPSIIKI+KPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL
Sbjct: 378 GESLSRNNRTDEARNEPSIIKIVKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 437

Query: 421 KANNPLLLINFYEQHLRYTPRS 442
           KANNPLLLINFYEQHL YT RS
Sbjct: 438 KANNPLLLINFYEQHLHYTTRS 447

[Close]

BLAST of MS007896 vs. ExPASy Swiss-Prot
Match: Q946J8 (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 5.6e-64
Identity = 177/419 (42.24%), Postives = 240/419 (57.28%), Query Frame = 0


Query: 36  GASSSAAPSTSHLSDTHQEQNLEEAEDDAEGDEEDEQEGDEHDFSAPA----SERTNLDE 95
           G         S L +   ++  E+ +++ E DE+++  GDE D          ER  LDE
Sbjct: 46  GGGGGGGSGESILREIGDDRPTEDGDEEEEEDEDEDDGGDEEDEEGEGEGGQEERPKLDE 105

Query: 96  GFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHRLTTGK-- 155
           GF+EIEAIRRKRVRKG++QYLIKWRGWPETANTWEPLENLQS ++ I+AFE  L  GK  
Sbjct: 106 GFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPG 165

Query: 156 RKRKRKHGVVHTQTKKRQHRDNFS--TYNVTDVEISVVDQRLPSAP----INMSSFTHPY 215
           RKRKRK+   H+Q KK+Q   + S      +D   S+ +  LP  P    ++ SS  +  
Sbjct: 166 RKRKRKYAGPHSQMKKKQRLTSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRD 225

Query: 216 VHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLPLRFDRKKDEREYDPKLSELKATV 275
           V +++   +++ E N     + R  +  IDN              E+EYDP L+EL+  V
Sbjct: 226 VEAKNAYVSNQVEANSGSVGMARQVRL-IDN--------------EKEYDPTLNELRGPV 285

Query: 276 LTNIAITDKLAINFQEGRTSE-NNSPAAGLSKSVPVEPISENRCTGAKRRKSGSVKRFRQ 335
                 ++    +   G  SE +N    GL K  P E    +R  GAKRRKSGSVKRF+Q
Sbjct: 286 NN----SNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQ 345

Query: 336 ESTISE---LPMAQNAELTLAVVDSGVGVEPMGVENSG-YHGESLSRNNKTDEARNEPSI 395
           + + S     P  QN    L  +DS   +  MG E  G     +LS+  K +E      I
Sbjct: 346 DGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIEEL----DI 405

Query: 396 IKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLLINFYEQHLRY 438
            KI+KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA+NP LLI FYEQHL+Y
Sbjct: 406 TKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKY 441

[Close]

BLAST of MS007896 vs. ExPASy Swiss-Prot
Match: Q944N1 (Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-49
Identity = 154/431 (35.73%), Postives = 220/431 (51.04%), Query Frame = 0


Query: 22  SDCANVNSSSN-PINGASSSAAPSTSHLSDTHQEQNLEEAEDDAEGDEEDEQEGDE---- 81
           S+ A   SS    ++G ++       +  D   +   E    + EG+ E++ E  E    
Sbjct: 13  SEAAGAGSSRKLDLDGVAAERQERNGYPEDAGSKCEEEPVAGEGEGEGEEKDEAPEVVRV 72

Query: 82  --HDFSAPASE-RTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQS 141
              D    A + +  L EGF+EIE +RR+R  KG++ YLIKWRGWPE+ANTWEP  NL S
Sbjct: 73  EKGDGDGVAKKVKPKLAEGFYEIETVRRRRTVKGKVYYLIKWRGWPESANTWEPETNLSS 132

Query: 142 CSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQHRDNFS----TYNVTDVEISVVDQR 201
           C++ I+A+E  L +GK R+RKRK G   T    +Q R  FS    TYN   V++ ++++ 
Sbjct: 133 CTDIIDAYEESLKSGKLRRRKRKFGATQTHPMIKQQR-RFSAPVATYNGPAVKVRIIEEP 192

Query: 202 LPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLPLRFDRKKD 261
            PS P+N+   T        +V ++  E N  V  +           G  L LR     +
Sbjct: 193 TPSPPLNVLKAT-------DLVDSNGSELNSKVDEVVN---------GNGLRLR-----E 252

Query: 262 EREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVEPISENRCTG 321
           + E + KLSELK    TN    D              N    G  K    E    +RCTG
Sbjct: 253 QNELNLKLSELKGATSTNGNPVD-----------ISGNGLTNGFPKVNGAEFYQSDRCTG 312

Query: 322 AKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHGESLSRNNK 381
           AK+RKSG V+RF++E+T +     Q         D+  G         G H   +     
Sbjct: 313 AKKRKSGCVRRFKRETTSAVKDDTQ---------DALAGGPLATFMQDGSHNHVM----V 372

Query: 382 TDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLLI 440
            D++++  +I +++ P+ Y AS SN++ DV VTFVA R+DG  V+VDNKFLK NNPLLLI
Sbjct: 373 ADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLI 397

[Close]

BLAST of MS007896 vs. ExPASy Swiss-Prot
Match: Q339W7 (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.4e-43
Identity = 146/403 (36.23%), Postives = 202/403 (50.12%), Query Frame = 0


Query: 53  QEQNLEEAEDDAEGDEEDEQEGDEHDFS----------APASERT--NLDEGFFEIEAIR 112
           +E+  E+AE + EG EE EQ   E + S          AP  + +   L EG++EIE IR
Sbjct: 55  EEEEWEDAE-EVEGGEESEQAAAEEEDSPLVVVEAEAAAPVVDGSPPKLAEGYYEIEDIR 114

Query: 113 RKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHRLTTGKRKRKRKHGVVH 172
           R+R+RKG+LQYL+KWRGWPE+ANTWEPLENL +CS+ I+AFE RL + +  RKRK  +  
Sbjct: 115 RRRLRKGKLQYLVKWRGWPESANTWEPLENLSACSDIIDAFEMRLQSPRPGRKRKRKI-- 174

Query: 173 TQTKKRQHRDNFSTYNVTDVEISVVDQRLPSAP-INMSSFTH-PYVHSQSVVCNHEGEKN 232
                            T V  S         P ++  S T  P    + + C     + 
Sbjct: 175 ---------------TTTPVAGSNPSHGKRGRPRLDAKSHTRAPAPEPKQLPCRTSCRRA 234

Query: 233 GDVTAIERAKQTDIDNVGRNLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQ 292
            + ++   A      +V RN      +       +   S +  T    + ++ +L     
Sbjct: 235 TNCSSKTVAGLDASGSVVRN------QLAQNIVQEGSSSVISRTPCQELPLSIRLTDQQN 294

Query: 293 EGRTSENNSPAAGLSKSVPVEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELT 352
           E      +S +  L   V V P    + TGAK+RKSG+V+RF Q       P     E  
Sbjct: 295 EHHLVNGSSNSENL---VKVPPSQGGQVTGAKKRKSGNVRRFEQNK-----PTQGQGECG 354

Query: 353 LAVVDSGVGVEPMGVENSGYHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDV 412
             VV   VG         G  G+      KT+   N   I KIIKP+ ++A+V+N++Q V
Sbjct: 355 ALVVAEDVG------STEGETGD----KKKTEGCPNRVHITKIIKPVRFAAAVNNDVQQV 414

Query: 413 LVTFVAMRSDGTEVMVDNKFLKANNPLLLINFYEQHLRYTPRS 442
            +TF A+RSDG EVMVD+K LKANNPLLLI++YEQ LRY P S
Sbjct: 415 SITFKALRSDGQEVMVDDKELKANNPLLLISYYEQCLRYNPTS 415

[Close]

BLAST of MS007896 vs. ExPASy Swiss-Prot
Match: O95931 (Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-08
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 85  ERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHR 144
           E + + E  F +E+IR+KRVRKG+++YL+KW+GWP   +TWEP E++      + A+E +
Sbjct: 2   ELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILD-PRLVMAYEEK 61

Query: 145 LTTGKRKRKRKHG 158
               +    RK G
Sbjct: 62  EERDRASGYRKRG 73

[Close]

BLAST of MS007896 vs. ExPASy Swiss-Prot
Match: Q8VDS3 (Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-08
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 85  ERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHR 144
           E + + E  F +E+IR+KRVRKG+++YL+KW+GWP   +TWEP E++      + A+E +
Sbjct: 2   ELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILD-PRLVMAYEEK 61

Query: 145 LTTGKRKRKRKHG 158
               +    RK G
Sbjct: 62  EERDRASGYRKRG 73

[Close]

BLAST of MS007896 vs. ExPASy TrEMBL
Match: A0A6J1DR80 (chromo domain-containing protein LHP1-like OS=Momordica charantia OX=3673 GN=LOC111022803 PE=4 SV=1)

HSP 1 Score: 842.4 bits (2175), Expect = 8.5e-241
Identity = 437/441 (99.09%), Postives = 437/441 (99.09%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VVVGSIHDAMDGGELHLHGGDS CANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA
Sbjct: 20  VVVGSIHDAMDGGELHLHGGDSYCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 79

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 80  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 139

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV 180
           TANTWEPLENLQSCSEFIEAFEHRLT GKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV
Sbjct: 140 TANTWEPLENLQSCSEFIEAFEHRLTMGKRKRKRKHGVVHTQTKKRQHRDNFSTYNVTDV 199

Query: 181 EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLP 240
           EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNG VTAIERAKQTDIDNVGRNLP
Sbjct: 200 EISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGAVTAIERAKQTDIDNVGRNLP 259

Query: 241 LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVEP 300
           LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSV VEP
Sbjct: 260 LRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVAVEP 319

Query: 301 ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG 360
           ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG
Sbjct: 320 ISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYHG 379

Query: 361 ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK 420
           ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK
Sbjct: 380 ESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLK 439

Query: 421 ANNPLLLINFYEQHLRYTPRS 442
           ANNPLLLINFYEQHLRYTPRS
Sbjct: 440 ANNPLLLINFYEQHLRYTPRS 460

[Close]

BLAST of MS007896 vs. ExPASy TrEMBL
Match: A0A1S3CBU8 (chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC103499007 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 9.5e-184
Identity = 350/445 (78.65%), Postives = 389/445 (87.42%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VVVGSI DAMD GE  +HGG+SD AN N ++NPING+     PS SHL++THQ+QNLEE 
Sbjct: 19  VVVGSIQDAMDSGE--VHGGNSDYANANINNNPINGSE----PSNSHLTETHQDQNLEEP 78

Query: 61  -EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWP 120
            +DD EGDEEDEQ+GDE  F   AS+RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWP
Sbjct: 79  DDDDGEGDEEDEQDGDEAAF---ASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWP 138

Query: 121 ETANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQH--RDNFSTYN 180
           E ANTWEPLENL +CS+FIEAFE  L TGK RKRKRKHGVVHTQTKKRQH  R +FS YN
Sbjct: 139 EAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQQRGSFSAYN 198

Query: 181 VTDVEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVG 240
           VTDVEISVVDQRLPSAP+N+SS T+PY HSQS+V NHEGEKNGDVTAIER KQTDIDN+G
Sbjct: 199 VTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERGKQTDIDNMG 258

Query: 241 RNLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSV 300
           RN   R + KKDE EYDPKLSELKATVLTNIA+TDK  IN Q+ RT+ENN  AAGLSK  
Sbjct: 259 RNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNGSAAGLSKGA 318

Query: 301 PVEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENS 360
            VEP+++NRCTGA+RRKSGSV+RFR +ST+SELP +Q+AELTLAVV+SGV VEP+GVENS
Sbjct: 319 FVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVRVEPIGVENS 378

Query: 361 GYHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDN 420
           GYHGESLSRNNKTD+ARNE SIIKIIKPLGYSASVSNN+QDVLVTFVAMRSDGTEV+VDN
Sbjct: 379 GYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDN 438

Query: 421 KFLKANNPLLLINFYEQHLRYTPRS 442
           KFLKA NPLLLINFYEQHLRYT RS
Sbjct: 439 KFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of MS007896 vs. ExPASy TrEMBL
Match: A0A6J1H4P7 (chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC111460458 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 5.2e-182
Identity = 347/442 (78.51%), Postives = 383/442 (86.65%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VV+GSI DAMDGGE  +HGGDSD  ++N+++NPING      PSTSHLS+THQEQNL+E 
Sbjct: 18  VVMGSIQDAMDGGE--VHGGDSDYVDMNTNNNPINGGE----PSTSHLSETHQEQNLDEP 77

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           +   E DE+DEQ+G E  F A   +RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 78  D---EQDEQDEQDGTEAAFDA---QRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPE 137

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQHRDNFSTYNVTD 180
           TANTWEPLENL +CSEFIEAFE  L +GK RKRKRKHGVVH QTKKRQ R NFSTYNVTD
Sbjct: 138 TANTWEPLENLHTCSEFIEAFEESLISGKQRKRKRKHGVVHVQTKKRQQRANFSTYNVTD 197

Query: 181 VEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNL 240
           VEISVVDQRLPSAPIN+ S T+PY  S+SVV NHEGEKNGDVTAIER +  DIDN GRN 
Sbjct: 198 VEISVVDQRLPSAPINIPSLTNPYARSRSVVYNHEGEKNGDVTAIERGRLADIDNAGRNA 257

Query: 241 PLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVE 300
             RF++KK E EYDPKLSELKATVLTNIAI DKLAI+F + RT+ENN PAAGLSK+  VE
Sbjct: 258 TQRFEQKKAEHEYDPKLSELKATVLTNIAIGDKLAIDFHDARTTENNIPAAGLSKTGSVE 317

Query: 301 PISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYH 360
            ++ENRCTGAKRRKSGSVKRFRQ+ST+SELP+ QN ELTLAVV+SGVG EP+GVENSGYH
Sbjct: 318 LVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESGVGAEPIGVENSGYH 377

Query: 361 GESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 420
           GESLS NN+TDEARNEPSIIKI+KPLG SASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL
Sbjct: 378 GESLSWNNRTDEARNEPSIIKIVKPLGCSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 437

Query: 421 KANNPLLLINFYEQHLRYTPRS 442
           KANNPLLLINFYEQHL YT RS
Sbjct: 438 KANNPLLLINFYEQHLHYTTRS 447

[Close]

BLAST of MS007896 vs. ExPASy TrEMBL
Match: A0A0A0KBN0 (Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 6.8e-182
Identity = 348/445 (78.20%), Postives = 385/445 (86.52%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           V VGSI DAMD GE  +HGG+SD ANVN ++ PING+     PS SHL++THQ+QNLEE 
Sbjct: 19  VAVGSIQDAMDSGE--VHGGNSDYANVNINNKPINGSE----PSNSHLTETHQDQNLEEV 78

Query: 61  -EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWP 120
            +DD EGDEEDEQ+GDE  F   AS+RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWP
Sbjct: 79  DDDDGEGDEEDEQDGDEAAF---ASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWP 138

Query: 121 ETANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQH--RDNFSTYN 180
           ETANTWEPLENL +CS+FIEAFE  L TGK RKRKRKHGVVHTQTKKRQH  R +FS YN
Sbjct: 139 ETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQQRGSFSAYN 198

Query: 181 VTDVEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVG 240
           VTDVEISVVDQRLPSAP+NMSS T+P+ HSQS+V NHEGEKNGDVTAIER KQTDIDN+G
Sbjct: 199 VTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERGKQTDIDNMG 258

Query: 241 RNLPLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSV 300
           R    R + KKDE EYDPKLSELKATVLTNIAITDK  INFQ+ R +ENN  AAGLSK  
Sbjct: 259 RKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNGSAAGLSKGA 318

Query: 301 PVEPISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENS 360
            VEP+++NRCTGA+RRKSGSV+RFR +ST+S LP +QNAELTLAVV+SG  VEP+GVENS
Sbjct: 319 FVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGARVEPIGVENS 378

Query: 361 GYHGESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDN 420
           GYHGESLSRNNKTD+ARNE SI KIIKPLGYSASVSNN+QDVLVTFVAMRSDGTEV+VDN
Sbjct: 379 GYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDN 438

Query: 421 KFLKANNPLLLINFYEQHLRYTPRS 442
           KFLKA NPLLLINFYEQHLRYT RS
Sbjct: 439 KFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of MS007896 vs. ExPASy TrEMBL
Match: A0A6J1KVS2 (chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111499147 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.2e-181
Identity = 347/442 (78.51%), Postives = 383/442 (86.65%), Query Frame = 0


Query: 1   VVVGSIHDAMDGGELHLHGGDSDCANVNSSSNPINGASSSAAPSTSHLSDTHQEQNLEEA 60
           VV+G I DAMDGGE  +HGGDSD  ++N+++NPING      PSTSHLS+THQEQNL+E 
Sbjct: 18  VVMGPIQDAMDGGE--VHGGDSDYVDMNTNNNPINGGE----PSTSHLSETHQEQNLDEP 77

Query: 61  EDDAEGDEEDEQEGDEHDFSAPASERTNLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPE 120
           +   E DE+DEQ+G E  F   A++RTNLD+GF+EIEAIRRKRVRKGQLQYLIKWRGWPE
Sbjct: 78  D---EQDEQDEQDGTEAAF---AAQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPE 137

Query: 121 TANTWEPLENLQSCSEFIEAFEHRLTTGK-RKRKRKHGVVHTQTKKRQHRDNFSTYNVTD 180
           TANTWEPLENL +CSEFIEAFE  L +GK RKRKRKHGVVH QTKKRQ R NFSTYNVTD
Sbjct: 138 TANTWEPLENLHTCSEFIEAFEQSLISGKQRKRKRKHGVVHVQTKKRQQRANFSTYNVTD 197

Query: 181 VEISVVDQRLPSAPINMSSFTHPYVHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNL 240
           VEISVVDQRLPSAPINM S T+PY  S+SVV NHEGEKNGDVTAIER +  DIDNVGRN 
Sbjct: 198 VEISVVDQRLPSAPINMPSLTNPYARSRSVVYNHEGEKNGDVTAIERGRLADIDNVGRNA 257

Query: 241 PLRFDRKKDEREYDPKLSELKATVLTNIAITDKLAINFQEGRTSENNSPAAGLSKSVPVE 300
             RF++KK E EYDPKLSELKAT LTNIAI DKLAI+F + RT+ENN  AAGLSK+  VE
Sbjct: 258 TQRFEQKKAEHEYDPKLSELKATGLTNIAIGDKLAIDFHDARTTENNVLAAGLSKTGSVE 317

Query: 301 PISENRCTGAKRRKSGSVKRFRQESTISELPMAQNAELTLAVVDSGVGVEPMGVENSGYH 360
            ++ENRCTGAKRRKSGSVKRFRQ+ST+SELP+ QN ELTLAVV+S VGVEP+GVENSGYH
Sbjct: 318 LVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESSVGVEPIGVENSGYH 377

Query: 361 GESLSRNNKTDEARNEPSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 420
           GE LSRNN+TDEARNEPSIIKI+KPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL
Sbjct: 378 GERLSRNNRTDEARNEPSIIKIVKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFL 437

Query: 421 KANNPLLLINFYEQHLRYTPRS 442
           KANNPLLLINFYEQHL YT RS
Sbjct: 438 KANNPLLLINFYEQHLHYTTRS 447

[Close]

BLAST of MS007896 vs. TAIR 10
Match: AT5G17690.1 (like heterochromatin protein (LHP1) )

HSP 1 Score: 246.5 bits (628), Expect = 4.0e-65
Identity = 177/419 (42.24%), Postives = 240/419 (57.28%), Query Frame = 0


Query: 36  GASSSAAPSTSHLSDTHQEQNLEEAEDDAEGDEEDEQEGDEHDFSAPA----SERTNLDE 95
           G         S L +   ++  E+ +++ E DE+++  GDE D          ER  LDE
Sbjct: 46  GGGGGGGSGESILREIGDDRPTEDGDEEEEEDEDEDDGGDEEDEEGEGEGGQEERPKLDE 105

Query: 96  GFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSEFIEAFEHRLTTGK-- 155
           GF+EIEAIRRKRVRKG++QYLIKWRGWPETANTWEPLENLQS ++ I+AFE  L  GK  
Sbjct: 106 GFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPG 165

Query: 156 RKRKRKHGVVHTQTKKRQHRDNFS--TYNVTDVEISVVDQRLPSAP----INMSSFTHPY 215
           RKRKRK+   H+Q KK+Q   + S      +D   S+ +  LP  P    ++ SS  +  
Sbjct: 166 RKRKRKYAGPHSQMKKKQRLTSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRD 225

Query: 216 VHSQSVVCNHEGEKNGDVTAIERAKQTDIDNVGRNLPLRFDRKKDEREYDPKLSELKATV 275
           V +++   +++ E N     + R  +  IDN              E+EYDP L+EL+  V
Sbjct: 226 VEAKNAYVSNQVEANSGSVGMARQVRL-IDN--------------EKEYDPTLNELRGPV 285

Query: 276 LTNIAITDKLAINFQEGRTSE-NNSPAAGLSKSVPVEPISENRCTGAKRRKSGSVKRFRQ 335
                 ++    +   G  SE +N    GL K  P E    +R  GAKRRKSGSVKRF+Q
Sbjct: 286 NN----SNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQ 345

Query: 336 ESTISE---LPMAQNAELTLAVVDSGVGVEPMGVENSG-YHGESLSRNNKTDEARNEPSI 395
           + + S     P  QN    L  +DS   +  MG E  G     +LS+  K +E      I
Sbjct: 346 DGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIEEL----DI 405

Query: 396 IKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLLINFYEQHLRY 438
            KI+KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA+NP LLI FYEQHL+Y
Sbjct: 406 TKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKY 441

The following BLAST results are available for this feature:

BLAST of MS007896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155759.1	1.8e-240	99.09	chromo domain-containing protein LHP1-like [Momordica charantia]	[more]
XP_038874378.1	2.5e-186	79.28	chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo...	[more]
KAG7013388.1	8.8e-184	79.19	Chromo domain-containing protein LHP1, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_008460094.1	2.0e-183	78.65	PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo]	[more]
KAG6574806.1	1.3e-182	78.96	Chromo domain-containing protein LHP1, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of MS007896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946J8	5.6e-64	42.24	Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE...	[more]
Q944N1	3.9e-49	35.73	Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2	[more]
Q339W7	2.4e-43	36.23	Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica O...	[more]
O95931	1.5e-08	39.73	Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1	[more]
Q8VDS3	1.5e-08	39.73	Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1	[more]

BLAST of MS007896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR80	8.5e-241	99.09	chromo domain-containing protein LHP1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CBU8	9.5e-184	78.65	chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A6J1H4P7	5.2e-182	78.51	chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KBN0	6.8e-182	78.20	Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4...	[more]
A0A6J1KVS2	1.2e-181	78.51	chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of MS007896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17690.1	4.0e-65	42.24	like heterochromatin protein (LHP1)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017984	Chromo domain subgroup	PRINTS	PR00504	CHROMODOMAIN	coord: 104..118 score: 41.33 coord: 91..99 score: 32.96 coord: 119..131 score: 51.03
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 93..146 e-value: 6.8E-16 score: 68.8
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 94..153 score: 18.313301
IPR008251	Chromo shadow domain	SMART	SM00300	ChS_2	coord: 362..440 e-value: 2.3E-10 score: 50.4
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 94..144 e-value: 3.7E-16 score: 58.8
None	No IPR available	GENE3D	2.40.50.40		coord: 88..159 e-value: 6.7E-22 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..51
None	No IPR available	PANTHER	PTHR47240:SF2	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 36..440
None	No IPR available	CDD	cd18982	CSD	coord: 386..435 e-value: 2.0789E-24 score: 93.3782
None	No IPR available	CDD	cd00024	CD_CSD	coord: 94..142 e-value: 1.60579E-21 score: 85.2212
IPR044251	Chromo domain-containing protein LHP1	PANTHER	PTHR47240	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 36..440
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 111..131
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 88..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007896.1	MS007896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
cellular_component	GO:0005634	nucleus