MS007886 (gene) Bitter gourd (TR) v1

Overview


Name	MS007886
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cyclin
Location	scaffold13: 2109349 .. 2110659 (-)
RNA-Seq Expression	MS007886
Synteny	MS007886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAGGAGAAAGCACCTCTATGATGCCAAAGCTCATCACTTTCCTCTCCTCTGTACTTCAGCGAGTGGCCGAGTCGAACGACCATCTTGACTCGGCCATTGAAACGCAAAAGGGCTCGGCCTTCCACGGCTTGACTCGGCCCGGGATCTCTCTCCATAGCTACCTAGAGAGGATCCTCAAGTATGCCAATTGCAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGATCGGTTTGCTCAGAGGCAGCCATTGTTGCCCATCAACTCTTATAATGTCCATCGCTTGCTCATTACTAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCGGTAAGTTTTTCAAAAAAGCTTGGATTTTTGCAAAAACTAGTTGAGTACCGAAAAAAAGAAACTTGTTTTTTATTTGAGGGAATTGATGAATTTTTTTTTCTTTTTTTTTGCTTCTAATAATTTGGTGCTCGGAGTTCTACTTCTTGCATTATGTCCATGACCCACCTCTCACTAATACTGGGAGAGGCTTCGTCCACTCTAAAGTCGATTCCGAAAGATAACTAGATTTTAAGTCATTAATTAAGTTCTCTACTTGAAGTTTAAAACTTGAAACTTTTTGTTTTGTTGTCAGTGTGAGTATTTGAGTTAACTTACATGTATTTCGGCTAATTTCACAGGATAACCACGTGACCCTATAACATTTAATTATCAAGAAAACTTGAAAGATTTTATCTTAAGTATGTGGTTACCATGAAATTTGAAACTCATTCCACCAAAAGTAGTTTTGCTTTATTTCACATGTTCCAATGTCGTCATTATGTCGACCCATAGTGTGTTTGAACTCGAAACATTGTAGGATACATCTCAAAGTTTGAAAAGGGAACTGATTTTTTGATGGGTCCTTAAAAGTTTTTGTTTTAAAGGAAGAAGAATCGAGAATTCGACAAAATTTTACTACTTATTCAAGTTCTGTTCTGGGTTTAAATGAGAAGAAAACAATCTCATAATTGACATCTTCATTTTTTTATTCAGGTGCTACAACAACGCTTTCTATGCAAGAGTGGGAGGGATCAGCACAACAGAAATCAATTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACCTTCCACACCTATTGCTCCTCTTTACAAAAGGAGATGCTGCTGCAGCAACCTCCTCTAACTTCTCCAATTACTTCTATAACTTCTTCAGAAATATCACTAAAAACCAAATATTTGAGCTTTGAGGAAGATGAATCTTCCCATCAACAGCAACAAGTAGCTGTT

mRNA sequence

ATGGTGGAAGGAGAAAGCACCTCTATGATGCCAAAGCTCATCACTTTCCTCTCCTCTGTACTTCAGCGAGTGGCCGAGTCGAACGACCATCTTGACTCGGCCATTGAAACGCAAAAGGGCTCGGCCTTCCACGGCTTGACTCGGCCCGGGATCTCTCTCCATAGCTACCTAGAGAGGATCCTCAAGTATGCCAATTGCAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGATCGGTTTGCTCAGAGGCAGCCATTGTTGCCCATCAACTCTTATAATGTCCATCGCTTGCTCATTACTAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCGGTGCTACAACAACGCTTTCTATGCAAGAGTGGGAGGGATCAGCACAACAGAAATCAATTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACCTTCCACACCTATTGCTCCTCTTTACAAAAGGAGATGCTGCTGCAGCAACCTCCTCTAACTTCTCCAATTACTTCTATAACTTCTTCAGAAATATCACTAAAAACCAAATATTTGAGCTTTGAGGAAGATGAATCTTCCCATCAACAGCAACAAGTAGCTGTT

Coding sequence (CDS)

ATGGTGGAAGGAGAAAGCACCTCTATGATGCCAAAGCTCATCACTTTCCTCTCCTCTGTACTTCAGCGAGTGGCCGAGTCGAACGACCATCTTGACTCGGCCATTGAAACGCAAAAGGGCTCGGCCTTCCACGGCTTGACTCGGCCCGGGATCTCTCTCCATAGCTACCTAGAGAGGATCCTCAAGTATGCCAATTGCAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGATCGGTTTGCTCAGAGGCAGCCATTGTTGCCCATCAACTCTTATAATGTCCATCGCTTGCTCATTACTAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCGGTGCTACAACAACGCTTTCTATGCAAGAGTGGGAGGGATCAGCACAACAGAAATCAATTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACCTTCCACACCTATTGCTCCTCTTTACAAAAGGAGATGCTGCTGCAGCAACCTCCTCTAACTTCTCCAATTACTTCTATAACTTCTTCAGAAATATCACTAAAAACCAAATATTTGAGCTTTGAGGAAGATGAATCTTCCCATCAACAGCAACAAGTAGCTGTT

Protein sequence

MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQKGSAFHGLTRPGISLHSYLERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITSSEISLKTKYLSFEEDESSHQQQQVAV

Homology

[Close]

BLAST of MS007886 vs. NCBI nr
Match: XP_022155727.1 (cyclin-U4-1-like [Momordica charantia])

HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQKGSAFHGLTRPGISLHSYLERI 60
           MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQK SAFHGLTRPGISLHSYLERI
Sbjct: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQKSSAFHGLTRPGISLHSYLERI 60

Query: 61  LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY 120
           LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY
Sbjct: 61  LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY 120

Query: 121 ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS 180
           ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS
Sbjct: 121 ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS 180

Query: 181 SEISLKTKYLSFEEDESSHQQQQVAV 207
           SEISLKTKYLSFEEDESSHQQQQVAV
Sbjct: 181 SEISLKTKYLSFEEDESSHQQQQVAV 206

[Close]

BLAST of MS007886 vs. NCBI nr
Match: XP_023548896.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 174/207 (84.06%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEMLL +PPL++ +  
Sbjct: 121 GFYARVGGISTKEINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. NCBI nr
Match: XP_023006685.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-87
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND+L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KY NCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEMLL +PPL++ +  
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. NCBI nr
Match: XP_022958930.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 173/207 (83.57%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEML  +PPL++ +  
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. NCBI nr
Match: KAG6574814.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 173/207 (83.57%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEML  +PPL++ +  
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.2e-65
Identity = 132/204 (64.71%), Postives = 157/204 (76.96%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDS-AIETQKGSAFHGLTRPGISLHSYLER 60
           M E E+ S+M KLI FLSS+L+RVAESND     A ++Q+ S FHGL+RP I++ SYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  ILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAF 120
           I KYANCS SCF+VAYVYLDRF  RQP LPINS+NVHRLLITSV+VAAKF+DD  YNNA+
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120

Query: 121 YARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSIT 180
           YA+VGGIST E+NFLE+DFLFGLGF LNVTPNTF+ Y S LQKEM L QP     + S  
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSR 180

Query: 181 SSEISLKTKYLSFEEDESSHQQQQ 204
           S         ++F +DE+SHQ+QQ
Sbjct: 181 S--------LITFNDDEASHQKQQ 196

[Close]

BLAST of MS007886 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.9e-57
Identity = 113/195 (57.95%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 9   MMPKLITFLSSVLQRVAESNDHLDSAI-ETQKGSAFHGLTRPGISLHSYLERILKYANCS 68
           +MP +IT +SS+LQRV+E+ND L     E ++ SAF+ +T+P IS+ SY+ERI KYA+CS
Sbjct: 19  IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78

Query: 69  NSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGIS 128
           +SC+IVAY+YLDRF Q+QPLLPI+S NVHRL+ITSVLV+AKFMDD CYNNAFYA+VGGI+
Sbjct: 79  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138

Query: 129 TTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQ--QPPLTSPITSITSSEISL 188
           T E+N LE+DFLFG+GF LNVT +T++ YCSSLQ+EM+++    PL  P   + S   +L
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPLLEPAFLVRSFHKNL 198

Query: 189 KTKYLSFEEDESSHQ 201
                 ++ED  + Q
Sbjct: 199 LKNL--YDEDHRNSQ 211

[Close]

BLAST of MS007886 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.6e-56
Identity = 112/201 (55.72%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 9   MMPKLITFLSSVLQRVAESNDHLDSAIETQKGSAFHGLTRPGISLHSYLERILKYANCSN 68
           +MP ++T +S +LQRV+E+ND+L    + QK S+F G+T+P IS+ SYLERI +YANCS 
Sbjct: 21  IMPSVLTAMSYLLQRVSETNDNLS---QKQKPSSFTGVTKPSISIRSYLERIFEYANCSY 80

Query: 69  SCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGIST 128
           SC+IVAY+YLDRF ++QP LPINS+NVHRL+ITSVLV+AKFMDD  YNN +YA+VGGIS 
Sbjct: 81  SCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISR 140

Query: 129 TEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITSSEISLKTK 188
            E+N LE+DFLFG+GF LNVT +TF+ YC  LQ+EM +    + S     +S +IS KTK
Sbjct: 141 EEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLM-KMKSLFLEPSSFKISSKTK 200

Query: 189 YLSFEEDESS----HQQQQVA 206
            + +  +E S    H ++Q+A
Sbjct: 201 LVMYPHEEDSLSTHHNKKQLA 217

[Close]

BLAST of MS007886 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.0e-52
Identity = 111/212 (52.36%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAI----ETQKGSAFHGLTRPGISLHSY 60
           M  GE    +P+++  LSS+LQRVAE ND   +A     E    SAF GLT+P IS+  Y
Sbjct: 1   MRTGEVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGY 60

Query: 61  LERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYN 120
           LERI ++ANCS SC++VAY+YLDRF +R+P L ++S+NVHRLLITSVL A KF+DD CYN
Sbjct: 61  LERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYN 120

Query: 121 NAFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEM-LLQQPPLTS-P 180
           NA++ARVGGIS  E+N+LEVDFLFG+ F LNVTP  F +YC+ LQ EM  L+QPP    P
Sbjct: 121 NAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLP 180

Query: 181 ITSITSSEISLKTKYLSFEEDESSHQQQQVAV 207
                 S+      +   ++ +   QQ Q+AV
Sbjct: 181 RLHCCPSDQDDAGCHHKQQQQQQQQQQHQLAV 212

[Close]

BLAST of MS007886 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 80/157 (50.96%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 11  PKLITFLSSVLQRVAESN-DHLDSAIETQKGSAFHGLTRPGISLHSYLERILKYANCSNS 70
           PK++  L++ L R  + N D LDS       + FHG   P +S+  Y ERI KY+ CS S
Sbjct: 36  PKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFKYSECSPS 95

Query: 71  CFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGISTT 130
           CF++A +Y++R+ Q QP + + S +VHRLLITSV+VAAKF DD  +NNAFYARVGGIST 
Sbjct: 96  CFVLALIYMERYLQ-QPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFYARVGGISTV 155

Query: 131 EINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLL 167
           E+N LE+D LF L F L V   TF +YC  L+KE ++
Sbjct: 156 EMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMV 191

[Close]

BLAST of MS007886 vs. ExPASy TrEMBL
Match: A0A6J1DQ51 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQKGSAFHGLTRPGISLHSYLERI 60
           MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQK SAFHGLTRPGISLHSYLERI
Sbjct: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAIETQKSSAFHGLTRPGISLHSYLERI 60

Query: 61  LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY 120
           LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY
Sbjct: 61  LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY 120

Query: 121 ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS 180
           ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS
Sbjct: 121 ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITS 180

Query: 181 SEISLKTKYLSFEEDESSHQQQQVAV 207
           SEISLKTKYLSFEEDESSHQQQQVAV
Sbjct: 181 SEISLKTKYLSFEEDESSHQQQQVAV 206

[Close]

BLAST of MS007886 vs. ExPASy TrEMBL
Match: A0A6J1L0U3 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND+L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KY NCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEMLL +PPL++ +  
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. ExPASy TrEMBL
Match: A0A6J1H4V3 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.1e-87
Identity = 173/207 (83.57%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK SAFHGLTRP ISLH+YL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEML  +PPL++ +  
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL-- 180

Query: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 204
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205

[Close]

BLAST of MS007886 vs. ExPASy TrEMBL
Match: A0A0A0KER4 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 160/218 (73.39%), Postives = 171/218 (78.44%), Query Frame = 0


Query: 1   MVEGESTS-MMPKLITFLSSVLQRVAESNDHL---DSAIETQKGSAFHGLTRPGISLHSY 60
           MVE ESTS  MPKLITFLSSVLQRVAESND L   DSA ETQK SAFHGLTRP ISL SY
Sbjct: 1   MVEQESTSCSMPKLITFLSSVLQRVAESNDDLDNNDSATETQKNSAFHGLTRPSISLQSY 60

Query: 61  LERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYN 120
           LERI KYANCSNSCFIVAYVYLDRFAQ+QPLLPINSYNVHRLLITSVLVAAKFMDD CYN
Sbjct: 61  LERIFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCYN 120

Query: 121 NAFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTS--- 180
           NAFYARVGGIST EINFLEVDFLFGLGF LNVTP TFHTY S LQ E+ L  PP T+   
Sbjct: 121 NAFYARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLNPPFTNISI 180

Query: 181 ------PITSITSSEISLKTKYLSFEEDE--SSHQQQQ 204
                 P      + ++ KT +++F+ D   S HQ+ Q
Sbjct: 181 LAPPLPPPPPPPQTSLNNKTLFITFQPDHQPSHHQKNQ 218

[Close]

BLAST of MS007886 vs. ExPASy TrEMBL
Match: A0A1S4E2M4 (cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 163/225 (72.44%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 1   MVEG-ESTS-MMPKLITFLSSVLQRVAESNDHLDS---AIETQKGSAFHGLTRPGISLHS 60
           MVE  ESTS  MPKLITFLSSVLQRVAESND LD    A ETQK SAFHGLTRP ISL S
Sbjct: 120 MVEAEESTSCSMPKLITFLSSVLQRVAESNDDLDDNDLATETQKNSAFHGLTRPSISLQS 179

Query: 61  YLERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCY 120
           YLERI KYANCSNSCFIVAYVYLDRFAQ+QPLLPINSYNVHRLLITSVLVAAKFMDD CY
Sbjct: 180 YLERIFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCY 239

Query: 121 NNAFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPP----- 180
           NNAFYARVGGIST EINFLEVDFLFGLGF LNVTP TFHTY S LQ E+ L  PP     
Sbjct: 240 NNAFYARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLHPPFSNIS 299

Query: 181 -LTSPITSITSSEISLKTK--YLSFEED-------ESSHQQQQVA 206
            LT P      S+ SL  K  +++F++D       + + QQQQ+A
Sbjct: 300 MLTPPPPPPPPSQTSLNNKALFITFQQDHQPNSHHQKNQQQQQLA 344

[Close]

BLAST of MS007886 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 248.8 bits (634), Expect = 3.7e-66
Identity = 132/204 (64.71%), Postives = 157/204 (76.96%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDS-AIETQKGSAFHGLTRPGISLHSYLER 60
           M E E+ S+M KLI FLSS+L+RVAESND     A ++Q+ S FHGL+RP I++ SYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  ILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAF 120
           I KYANCS SCF+VAYVYLDRF  RQP LPINS+NVHRLLITSV+VAAKF+DD  YNNA+
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120

Query: 121 YARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSIT 180
           YA+VGGIST E+NFLE+DFLFGLGF LNVTPNTF+ Y S LQKEM L QP     + S  
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSR 180

Query: 181 SSEISLKTKYLSFEEDESSHQQQQ 204
           S         ++F +DE+SHQ+QQ
Sbjct: 181 S--------LITFNDDEASHQKQQ 196

[Close]

BLAST of MS007886 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-58
Identity = 113/195 (57.95%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 9   MMPKLITFLSSVLQRVAESNDHLDSAI-ETQKGSAFHGLTRPGISLHSYLERILKYANCS 68
           +MP +IT +SS+LQRV+E+ND L     E ++ SAF+ +T+P IS+ SY+ERI KYA+CS
Sbjct: 19  IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78

Query: 69  NSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGIS 128
           +SC+IVAY+YLDRF Q+QPLLPI+S NVHRL+ITSVLV+AKFMDD CYNNAFYA+VGGI+
Sbjct: 79  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138

Query: 129 TTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQ--QPPLTSPITSITSSEISL 188
           T E+N LE+DFLFG+GF LNVT +T++ YCSSLQ+EM+++    PL  P   + S   +L
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPLLEPAFLVRSFHKNL 198

Query: 189 KTKYLSFEEDESSHQ 201
                 ++ED  + Q
Sbjct: 199 LKNL--YDEDHRNSQ 211

[Close]

BLAST of MS007886 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-57
Identity = 112/201 (55.72%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 9   MMPKLITFLSSVLQRVAESNDHLDSAIETQKGSAFHGLTRPGISLHSYLERILKYANCSN 68
           +MP ++T +S +LQRV+E+ND+L    + QK S+F G+T+P IS+ SYLERI +YANCS 
Sbjct: 21  IMPSVLTAMSYLLQRVSETNDNLS---QKQKPSSFTGVTKPSISIRSYLERIFEYANCSY 80

Query: 69  SCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFYARVGGIST 128
           SC+IVAY+YLDRF ++QP LPINS+NVHRL+ITSVLV+AKFMDD  YNN +YA+VGGIS 
Sbjct: 81  SCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISR 140

Query: 129 TEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITSITSSEISLKTK 188
            E+N LE+DFLFG+GF LNVT +TF+ YC  LQ+EM +    + S     +S +IS KTK
Sbjct: 141 EEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLM-KMKSLFLEPSSFKISSKTK 200

Query: 189 YLSFEEDESS----HQQQQVA 206
            + +  +E S    H ++Q+A
Sbjct: 201 LVMYPHEEDSLSTHHNKKQLA 217

[Close]

BLAST of MS007886 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 73/166 (43.98%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 3   EGESTSMMPKLITFLSSVLQRVAESNDHLDSAIE--TQKGSAFHGLTRPGISLHSYLERI 62
           E  + +  P+++T +S V++++   N+ L    +   +   AFHG+  P IS+  YLERI
Sbjct: 17  ESATEAATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERI 76

Query: 63  LKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNAFY 122
            KY  CS +CF+V YVY+DR A + P   + S NVHRLL+T V++AAK +DD  YNN FY
Sbjct: 77  YKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFY 136

Query: 123 ARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLL 167
           ARVGG+S  ++N +E++ LF L F + V+   F +YC  L+KEM L
Sbjct: 137 ARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]

BLAST of MS007886 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 144.8 bits (364), Expect = 7.6e-35
Identity = 74/165 (44.85%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHLDSAI--ETQKGSAFHGLTRPGISLHSYLE 60
           ++EG+     P +++ LSS L+R    N H D  +       + F G + P IS+  YL+
Sbjct: 22  IIEGKRLKKPPTVLSRLSSSLERSLLLN-HDDKILLGSPDSVTVFDGRSPPEISIAHYLD 81

Query: 61  RILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNNA 120
           RI KY+ CS SCF++A++Y+D F  +   L +   NVHRL+IT+V++AAK  DDR +NNA
Sbjct: 82  RIFKYSCCSPSCFVIAHIYIDHFLHKTRAL-LKPLNVHRLIITTVMLAAKVFDDRYFNNA 141

Query: 121 FYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKE 164
           +YARVGG++T E+N LE++ LF L F L V P TFHT+C  L+K+
Sbjct: 142 YYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

The following BLAST results are available for this feature:

BLAST of MS007886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155727.1	2.6e-109	99.51	cyclin-U4-1-like [Momordica charantia]	[more]
XP_023548896.1	2.1e-87	84.06	cyclin-U4-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006685.1	3.6e-87	83.57	cyclin-U4-1-like [Cucurbita maxima]	[more]
XP_022958930.1	1.0e-86	83.57	cyclin-U4-1-like [Cucurbita moschata]	[more]
KAG6574814.1	1.0e-86	83.57	Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS007886 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	5.2e-65	64.71	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LY16	6.9e-57	57.95	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q9FKF6	7.6e-56	55.72	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q7XC35	1.0e-52	52.36	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q75HV0	1.3e-36	50.96	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]

BLAST of MS007886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ51	1.2e-109	99.51	Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1	[more]
A0A6J1L0U3	1.7e-87	83.57	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1	[more]
A0A6J1H4V3	5.1e-87	83.57	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1	[more]
A0A0A0KER4	2.0e-75	73.39	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1	[more]
A0A1S4E2M4	2.2e-74	72.44	cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1	[more]

BLAST of MS007886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	3.7e-66	64.71	cyclin p4;1	[more]
AT5G07450.1	4.9e-58	57.95	cyclin p4;3	[more]
AT5G61650.1	5.4e-57	55.72	CYCLIN P4;2	[more]
AT3G21870.1	8.1e-37	43.98	cyclin p2;1	[more]
AT3G63120.1	7.6e-35	44.85	cyclin p1;1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 22..146 e-value: 2.2E-38 score: 132.2
None	No IPR available	GENE3D	1.10.472.10		coord: 5..205 e-value: 5.8E-57 score: 194.7
None	No IPR available	PANTHER	PTHR15615:SF91	CYCLIN-U4-1	coord: 6..203
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 6..203
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 1..206 e-value: 1.7E-75 score: 251.4
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 51..139 e-value: 6.56592E-5 score: 38.3737
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 53..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007886.1	MS007886.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding