MS007850 (gene) Bitter gourd (TR) v1

Overview


Name	MS007850
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold13: 1797946 .. 1798215 (-)
RNA-Seq Expression	MS007850
Synteny	MS007850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGTATGATATGGGCAACAGCAGAGGATTTAGCGAGGAACAGAGGGCGCGTTCTATCACTTTATCGCCAAATATTGAGGAGCCTCAACTCCCCAATGTTGCCTCTCAGCTTCGCAGCAAGGTTAGCAAAGAAGGCAGAAGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAACGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCTCTCTCCCTTTTAAGAAAGGGAGAAATTCCCAAATATATTCAA

mRNA sequence

ATGGCGAAAGGTATGATATGGGCAACAGCAGAGGATTTAGCGAGGAACAGAGGGCGCGTTCTATCACTTTATCGCCAAATATTGAGGAGCCTCAACTCCCCAATGTTGCCTCTCAGCTTCGCAGCAAGGTTAGCAAAGAAGGCAGAAGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAACGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCTCTCTCCCTTTTAAGAAAGGGAGAAATTCCCAAATATATTCAA

Coding sequence (CDS)

ATGGCGAAAGGTATGATATGGGCAACAGCAGAGGATTTAGCGAGGAACAGAGGGCGCGTTCTATCACTTTATCGCCAAATATTGAGGAGCCTCAACTCCCCAATGTTGCCTCTCAGCTTCGCAGCAAGGTTAGCAAAGAAGGCAGAAGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAACGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCTCTCTCCCTTTTAAGAAAGGGAGAAATTCCCAAATATATTCAA

Protein sequence

MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEERSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ

Homology

[Close]

BLAST of MS007850 vs. NCBI nr
Match: XP_022155709.1 (uncharacterized protein LOC111022772 [Momordica charantia] >XP_022155710.1 uncharacterized protein LOC111022772 [Momordica charantia])

HSP 1 Score: 174.1 bits (440), Expect = 5.5e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. NCBI nr
Match: KAG7013408.1 (putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1   MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
           MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 129 MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 188

Query: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
           RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 189 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 218

[Close]

BLAST of MS007850 vs. NCBI nr
Match: XP_022958896.1 (uncharacterized protein LOC111460046 [Cucurbita moschata])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. NCBI nr
Match: XP_038874375.1 (uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874377.1 uncharacterized protein LOC120067065 [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 2.3e-38
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG++WATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. NCBI nr
Match: XP_023547728.1 (uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASE+
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASED 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. ExPASy TrEMBL
Match: A0A6J1DN67 (uncharacterized protein LOC111022772 OS=Momordica charantia OX=3673 GN=LOC111022772 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. ExPASy TrEMBL
Match: A0A6J1H3E8 (uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC111460046 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.5e-39
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. ExPASy TrEMBL
Match: A0A5A7TEG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00090 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.2e-38
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. ExPASy TrEMBL
Match: A0A0A0LL01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.2e-38
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. ExPASy TrEMBL
Match: A0A1S3C4V6 (uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.2e-38
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG+IWATAEDLARNRGRV+SLYRQILRSLNSP LPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of MS007850 vs. TAIR 10
Match: AT1G65032.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 2.1e-26
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 3  KGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEERS 62
          K +IW TAE+ A+NRG+VLSLYRQ+LRS+NSP L LS+A+RLAKKAEVR IFL  SEE S
Sbjct: 2  KSLIWLTAEEAAKNRGKVLSLYRQLLRSINSPKLQLSYASRLAKKAEVRTIFLFGSEEIS 61

Query: 63 LHNIEDLIDTAEYSLSLLRKGEIP 87
           HN+ DLI T EY+LS L++G+IP
Sbjct: 62 KHNVADLIRTGEYALSQLKQGKIP 85

The following BLAST results are available for this feature:

BLAST of MS007850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155709.1	5.5e-40	100.00	uncharacterized protein LOC111022772 [Momordica charantia] >XP_022155710.1 uncha...	[more]
KAG7013408.1	1.8e-38	96.67	putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022958896.1	1.8e-38	96.67	uncharacterized protein LOC111460046 [Cucurbita moschata]	[more]
XP_038874375.1	2.3e-38	95.56	uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 unchara...	[more]
XP_023547728.1	3.9e-38	95.56	uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS007850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS007850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN67	2.6e-40	100.00	uncharacterized protein LOC111022772 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1H3E8	8.5e-39	96.67	uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A5A7TEG5	7.2e-38	94.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL01	7.2e-38	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1	[more]
A0A1S3C4V6	7.2e-38	94.44	uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=...	[more]

BLAST of MS007850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65032.1	2.1e-26	67.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36724	COMPLEX 1 LYR-LIKE PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007850.1	MS007850.1	mRNA