MS007814 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGTGTTGTGTTGCGTTCTCCATGGCAATGCCCACACTTCTCTCTAGCTTCCTCCTTCTCGTGATCGGAAGCTCCGCCGTGGCGGACGGCGCGTACTGGTGCGTGGTCCGGAGCGACGCGAGCGACTCGGCGCTGCAGTCGGCGCTGGACTACGCCTGCGCCACCGGCGCCGAGTGCGCCCCGATTCTGTCGAACGGCCTCTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTTCAGCGCAAGGCCATGGCCGCCGGCTCCTGCGACTTCGCCGGCGCCGCCACCATTGCCCAGACCGACCCANNNNNNNNNNNNNNNNNNNCTTTTGAGTTTTATTCATTTTTTTTTCCTCTTCTTTTTCAGGTTATGGATCTTGCGTCTACCCATCTTCCATCAGGTACGCTAATTTCTGATTTTTTTTTCCTTTTTCTGCGATAAAATTTATTTTAGTTGAATTACTGAGTTTGGTTCGGTGGTAGACTAAAAATATATTCTATATGGAATCGAAAATTCACTAGTCAAATTAAACATAGCTTAACTGTTTCTGATAAAAGATTGTAGGTTCGGATATCTACTAATGTTTAATTGGTAAGATATATATTTCTGATAAAAATTTTATCGGTGAAGTTTTATATAGAAAAAATTTTAAAGTGGAAGAATTTATTTGATACAAATTATGAAAGTTTAAGGGATGGAATTTATTTGATACAAATTATGAAAGTTTAAGAGATGGAATTTATTATTTAAATTAGAATGTGCATAGAAAACACTTTATTTTTTTTTTATGGAGATTTCTTCATGTTCACGTAAATGGGTTCTCTTTTTAGGGCAAGATTTGAAAGAATTTGTTTCTCTAAGTCTTATTTGATTTCTTAATCTAGTTTAAGGATTTTAGTTTCTTTTATTATTATTATTATTTTATTATTATTTTTTGTGGGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGTAAGAGAGATGGAAAAAGAACCTTTTTTAGGATTTTATTTGAGGATTCATGGGATGGAGGAGTGAATTCCCTAAACATTTATATTCTAAGTTTAATATTTATAATGCATTTACTAATATCTTATTACTTTTTTTTTCACGTAGAATAACTAAATTATATATAACATATAGTTTTTCTCATTTGACATTCAAGAGATATTTCCTTAAATAGTTTTCAAATTGGGGTGGTATGGAAATAAGAATCACGTCTTCTTTTCTCCTTTTGGAAAATCTTTGGTTGAGTATCGATGGTAAAGTATAATTTTTGCCAACATTGTTTTCAAAATTCTCATTTTCTTCCGCTTGATAAAATCAAGATTTTCCTGTCTTTTCTTCTCACATAGAAAATTAATACTCTCTATCTTCAATGCAATTCTTATTACTTAAAAATATATATTTTTTAATCTATCATTTTATTTACTTGTATTTTTATGACATAGAAATGAAAAATAATAAACTTATACATATATTTGAAAAAAATAATGACATTATCAATTACCAAATAATTTAAATTTAATTAAAATATTACTATTTTTTTTAATACAACATGTTAGGGATGAGAGATCGAACTTGCAGTCTCTCGATTTGAGATATATCTCAATTATCACTTAACTACTACTATTTATTTGAAAAAAAAAAGCGGTATAATAATAATACAGATAGAACAGTGTCCAATATCTTTCGGTGGGAATTATCTTAGTTACACACCGTTGGATCAGCGTGGGCCCAGGTTGAGGGCACATCCAACGGTCAGGATAGCATGAATTTATTTTTACAATTTCAAATTAGCTTTTTATTTACTTTTTCTTTATAGAATATTTTGAATTAGCTTTTGAGTGCGCAGGCTGGTCAATAATAATAGTACATGTCAGACTCTGAAAGGTCATTCATTACTGACACTTGTCAGATAAAGCTTGTCCTTTCTTGGGAAAACAAAAAAATAAATTAAAAAATAAACTGAGGAGAAAAAAAAAAGGTAGAAATCACATATTTATCCTGTGAATCTTTGTGTTAAAATTTTACTGTCGAACACAAAATTAAACGTTTAGAGAATTAATAGACACAATTTTAAAAATTTCAATACAAAATTTAGAGAACACATAAGTAATTTAATCAAAATAAATATATCAATTAGTTCTTAAGTTTTAGTTTAATTAACTTCTCTCTTTTTATTTTTTTATCTTTAGTATTACTTCTCCTTTTCCTCTCTTTCTCTCTTCCTTTGCTAGATCTCGGCGATATCGATCCGCTGCAAAATATTTCTGAAGGGATCTCTAAGATGGTCTAGATTTTTTTTTTTTTTTTTTTAAGAAAAAAGACAAGAATAAGAATTAGAAGGAGTGACATGTTGGGTTGTCCCTTAAGGAATCAATTCTTTGTCTAAGAGAATTTGTCCAATTATTTTGCTTATGTTCTCCTTCATTCCTTTGGTCCCTATGGTCCTATAAGTGTCAATAATTTTGCCACCAAGCTTTGTTCAACAATACTTCTTGCCTTGCCCAATGCACTTATCACTGGGCCCACATTTTGAAATTACGTAGCAAACAAAAAATGTTAGGAACCTTACTTTTCTTCAAACCCGTCCTATTTAAGGAAAAAGGTAGATGTACCAAGTTATTCTTACTAAACTTAAAAGATCCATGAAGAAAGATATCTAACAAAGTTCGTTTGTCACAACTTCAGTACTGCAGGAGGACCAATCACACCGACTCCTCCAGCGAACGCAAGCCCAACAATAACAGTGCCAGCCACGACCACCTCACCGAACTTCAACAACGGTGGTACAGATGACACTAATGGACTAAATCCAGTATTCAACCCGACATCAACCACAACTCCAACCAACTCGAAAGCCTCTTCAAGTTTCACGATTCCTAAACTATTGATCTTTGTCTTGTTTTCAATTGCTATCTCACTCACTTTACAAACAATT TTGTGTTGTGTTGCGTTCTCCATGGCAATGCCCACACTTCTCTCTAGCTTCCTCCTTCTCGTGATCGGAAGCTCCGCCGTGGCGGACGGCGCGTACTGGTGCGTGGTCCGGAGCGACGCGAGCGACTCGGCGCTGCAGTCGGCGCTGGACTACGCCTGCGCCACCGGCGCCGAGTGCGCCCCGATTCTGTCGAACGGCCTCTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTTCAGCGCAAGGCCATGGCCGCCGGCTCCTGCGACTTCGCCGGCGCCGCCACCATTGCCCAGACCGACCCANNNNNNNNNNNNNNNNNNNCTTTTGATACTGCAGGAGGACCAATCACACCGACTCCTCCAGCGAACGCAAGCCCAACAATAACAGTGCCAGCCACGACCACCTCACCGAACTTCAACAACGGTGGTACAGATGACACTAATGGACTAAATCCAGTATTCAACCCGACATCAACCACAACTCCAACCAACTCGAAAGCCTCTTCAAGTTTCACGATTCCTAAACTATTGATCTTTGTCTTGTTTTCAATTGCTATCTCACTCACTTTACAAACAATT TTGTGTTGTGTTGCGTTCTCCATGGCAATGCCCACACTTCTCTCTAGCTTCCTCCTTCTCGTGATCGGAAGCTCCGCCGTGGCGGACGGCGCGTACTGGTGCGTGGTCCGGAGCGACGCGAGCGACTCGGCGCTGCAGTCGGCGCTGGACTACGCCTGCGCCACCGGCGCCGAGTGCGCCCCGATTCTGTCGAACGGCCTCTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTTCAGCGCAAGGCCATGGCCGCCGGCTCCTGCGACTTCGCCGGCGCCGCCACCATTGCCCAGACCGACCCANNNNNNNNNNNNNNNNNNNCTTTTGATACTGCAGGAGGACCAATCACACCGACTCCTCCAGCGAACGCAAGCCCAACAATAACAGTGCCAGCCACGACCACCTCACCGAACTTCAACAACGGTGGTACAGATGACACTAATGGACTAAATCCAGTATTCAACCCGACATCAACCACAACTCCAACCAACTCGAAAGCCTCTTCAAGTTTCACGATTCCTAAACTATTGATCTTTGTCTTGTTTTCAATTGCTATCTCACTCACTTTACAAACAATT LCCVAFSMAMPTLLSSFLLLVIGSSAVADGAYWCVVRSDASDSALQSALDYACATGAECAPILSNGLCFLPNTIQAHASYAFNSFFQRKAMAAGSCDFAGAATIAQTDPXXXXXXXFDTAGGPITPTPPANASPTITVPATTTSPNFNNGGTDDTNGLNPVFNPTSTTTPTNSKASSSFTIPKLLIFVLFSIAISLTLQTI Homology
BLAST of MS007814 vs. NCBI nr
Match: XP_038875835.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]) HSP 1 Score: 255.4 bits (651), Expect = 4.2e-64 Identity = 148/201 (73.63%), Postives = 163/201 (81.09%), Query Frame = 0
BLAST of MS007814 vs. NCBI nr
Match: XP_008457240.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 7.9e-63 Identity = 137/188 (72.87%), Postives = 156/188 (82.98%), Query Frame = 0
BLAST of MS007814 vs. NCBI nr
Match: KAE8651770.1 (hypothetical protein Csa_006265 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 2.5e-61 Identity = 136/188 (72.34%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of MS007814 vs. NCBI nr
Match: XP_004138961.2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 2.5e-61 Identity = 136/188 (72.34%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of MS007814 vs. NCBI nr
Match: XP_022959424.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >XP_023548894.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.4 bits (612), Expect = 1.4e-59 Identity = 143/203 (70.44%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of MS007814 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.5e-21 Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 0
BLAST of MS007814 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 8.0e-18 Identity = 60/157 (38.22%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of MS007814 vs. ExPASy Swiss-Prot
Match: Q84V39 (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of MS007814 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16 Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 0
BLAST of MS007814 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.0e-14 Identity = 62/176 (35.23%), Postives = 87/176 (49.43%), Query Frame = 0
BLAST of MS007814 vs. ExPASy TrEMBL
Match: A0A1S3C4M3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103496965 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.8e-63 Identity = 137/188 (72.87%), Postives = 156/188 (82.98%), Query Frame = 0
BLAST of MS007814 vs. ExPASy TrEMBL
Match: A0A0A0LND4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139290 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61 Identity = 136/188 (72.34%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of MS007814 vs. ExPASy TrEMBL
Match: A0A6J1H812 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460407 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 6.7e-60 Identity = 143/203 (70.44%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of MS007814 vs. ExPASy TrEMBL
Match: A0A6J1KVB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita maxima OX=3661 GN=LOC111499021 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 2.0e-59 Identity = 141/203 (69.46%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of MS007814 vs. ExPASy TrEMBL
Match: A0A6J1HKA9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464333 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 2.2e-55 Identity = 132/197 (67.01%), Postives = 148/197 (75.13%), Query Frame = 0
BLAST of MS007814 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 6.9e-33 Identity = 97/203 (47.78%), Postives = 121/203 (59.61%), Query Frame = 0
BLAST of MS007814 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-22 Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 0
BLAST of MS007814 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 92.0 bits (227), Expect = 5.7e-19 Identity = 60/157 (38.22%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of MS007814 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17 Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 0
BLAST of MS007814 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 3.1e-17 Identity = 64/185 (34.59%), Postives = 92/185 (49.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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