MS007781 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCAAATATTACCGTTGTTGTTACCCATCAGCGACCTACATGCTACTGATGAATTGATCTCAACTCCAAAGCAAGTTACAGTGATCATCGTTAACGAGTTGGCTCTTATTCCACTATTGGGCGTTCACTGTAGATCCAAAGAAGACGATTTTGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGACAACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCACTGCTTTACTATTTATGACTACAAAAGAGAT ATGCTCCAAATATTACCGTTGTTGTTACCCATCAGCGACCTACATGCTACTGATGAATTGATCTCAACTCCAAAGCAAGTTACAGTGATCATCGTTAACGAGTTGGCTCTTATTCCACTATTGGGCGTTCACTGTAGATCCAAAGAAGACGATTTTGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGACAACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCACTGCTTTACTATTTATGACTACAAAAGAGAT ATGCTCCAAATATTACCGTTGTTGTTACCCATCAGCGACCTACATGCTACTGATGAATTGATCTCAACTCCAAAGCAAGTTACAGTGATCATCGTTAACGAGTTGGCTCTTATTCCACTATTGGGCGTTCACTGTAGATCCAAAGAAGACGATTTTGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGACAACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCACTGCTTTACTATTTATGACTACAAAAGAGAT MLQILPLLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD Homology
BLAST of MS007781 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of MS007781 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of MS007781 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25 Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of MS007781 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 3.9e-23 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of MS007781 vs. NCBI nr
Match: KAA0046083.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17 Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of MS007781 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.9e-13 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of MS007781 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.0e-09 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of MS007781 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of MS007781 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08 Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of MS007781 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.3e-07 Identity = 34/79 (43.04%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of MS007781 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of MS007781 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of MS007781 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26 Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of MS007781 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of MS007781 vs. ExPASy TrEMBL
Match: A0A5A7TR91 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00040 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 5.3e-18 Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of MS007781 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-14 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of MS007781 vs. TAIR 10
Match: AT3G55252.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11 Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of MS007781 vs. TAIR 10
Match: AT3G54925.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of MS007781 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of MS007781 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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