MS004701 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGTTTAGGCAAACCTGTTTTGGCCATCTATTAGACTTCTCAATTAGCAAAACCTCATCTCAACTTCTCTTTCACCTAATCCAGTGCCTTTGTAAACCAAGAAAGGCATCAGAATTAAACTTTTATATTGGGGGAAGATATTAAAGTTTGGAATCACGAAATTTGCCCTAGTGACTGGGTTGAACTGTTGTCCATTACCCCAAATAGACATGGATAGGGGGAAGGACACATAAGGAACATTTATTTTGAAGGGGAGAAGTCCGTGATAAGGAAACACTTAAACCTTGCTTTCAAGGTTAACAAAAATGCACCTGAAGATGATATGGTGAAGATGACCTTGCTTTATTATTTAGAGAGTTTTCTTTTGCCACACAAGGACTCCGTGGATGTAGAGATGGACCATATCCTAATGGTAGATGATGAGGAAATATTCAATAACTACCCATGGGGGAGGGTATCATTTGACCTTCTTATTGAATACATGAAAAAGGCGTCAGATAGCCGAGGGCTAATAGGCGTAGGGATGGGTGGATTCATATCTGCACTGATAGTGTGGGCGTATGAGGTCATACCT AGGTTTAGGCAAACCTGTTTTGGCCATCTATTAGACTTCTCAATTAGCAAAACCTCATCTCAACTTCTCTTTCACCTAATCCAGTGCCTTTGTAAACCAAGAAAGGCATCAGAATTAAACTTTTATATTGGGAAGATATTAAAGTTTGGAATCACGAAATTTGCCCTAGTGACTGGGTTGAACTGTTGTCCATTACCCCAAATAGACATGGATAGGGAAGGACACATAAGGAACATTTATTTTGAAGGGGAGAAGTCCGTGATAAGGAAACACTTAAACCTTGCTTTCAAGGTTAACAAAAATGCACCTGAAGATGATATGGTGAAGATGACCTTGCTTTATTATTTAGAGAGTTTTCTTTTGCCACACAAGGACTCCGTGGATGTAGAGATGGACCATATCCTAATGGTAGATGATGAGGAAATATTCAATAACTACCCATGGGGGAGGGTATCATTTGACCTTCTTATTGAATACATGAAAAAGGCGTCAGATAGCCGAGGGCTAATAGGCGTAGGGATGGGTGGATTCATATCTGCACTGATAGTGTGGGCGTATGAGGTCATACCT AGGTTTAGGCAAACCTGTTTTGGCCATCTATTAGACTTCTCAATTAGCAAAACCTCATCTCAACTTCTCTTTCACCTAATCCAGTGCCTTTGTAAACCAAGAAAGGCATCAGAATTAAACTTTTATATTGGGAAGATATTAAAGTTTGGAATCACGAAATTTGCCCTAGTGACTGGGTTGAACTGTTGTCCATTACCCCAAATAGACATGGATAGGGAAGGACACATAAGGAACATTTATTTTGAAGGGGAGAAGTCCGTGATAAGGAAACACTTAAACCTTGCTTTCAAGGTTAACAAAAATGCACCTGAAGATGATATGGTGAAGATGACCTTGCTTTATTATTTAGAGAGTTTTCTTTTGCCACACAAGGACTCCGTGGATGTAGAGATGGACCATATCCTAATGGTAGATGATGAGGAAATATTCAATAACTACCCATGGGGGAGGGTATCATTTGACCTTCTTATTGAATACATGAAAAAGGCGTCAGATAGCCGAGGGCTAATAGGCGTAGGGATGGGTGGATTCATATCTGCACTGATAGTGTGGGCGTATGAGGTCATACCT RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYIGKILKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP Homology
BLAST of MS004701 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 216.5 bits (550), Expect = 2.0e-52 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 0
BLAST of MS004701 vs. NCBI nr
Match: TYK09852.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 177.9 bits (450), Expect = 8.0e-41 Identity = 79/166 (47.59%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of MS004701 vs. NCBI nr
Match: KAA0040869.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 6.8e-40 Identity = 75/163 (46.01%), Postives = 119/163 (73.01%), Query Frame = 0
BLAST of MS004701 vs. NCBI nr
Match: TYK23840.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 6.8e-40 Identity = 75/165 (45.45%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of MS004701 vs. NCBI nr
Match: KAA0051382.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 6.8e-40 Identity = 75/165 (45.45%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of MS004701 vs. ExPASy TrEMBL
Match: A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 9.8e-53 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 0
BLAST of MS004701 vs. ExPASy TrEMBL
Match: A0A5D3CEX9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00200 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 3.9e-41 Identity = 79/166 (47.59%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of MS004701 vs. ExPASy TrEMBL
Match: A0A5A7U6E1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001210 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40 Identity = 75/165 (45.45%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of MS004701 vs. ExPASy TrEMBL
Match: A0A5A7THT9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00190 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40 Identity = 75/163 (46.01%), Postives = 119/163 (73.01%), Query Frame = 0
BLAST of MS004701 vs. ExPASy TrEMBL
Match: A0A5D3DKA6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00030 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40 Identity = 75/165 (45.45%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of MS004701 vs. TAIR 10
Match: AT1G31150.1 (Domain of unknown function (DUF1985) ) HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09 Identity = 54/209 (25.84%), Postives = 92/209 (44.02%), Query Frame = 0
BLAST of MS004701 vs. TAIR 10
Match: AT4G08430.1 (Ulp1 protease family protein ) HSP 1 Score: 52.4 bits (124), Expect = 4.7e-07 Identity = 44/155 (28.39%), Postives = 67/155 (43.23%), Query Frame = 0
BLAST of MS004701 vs. TAIR 10
Match: AT5G45570.1 (Ulp1 protease family protein ) HSP 1 Score: 48.9 bits (115), Expect = 5.2e-06 Identity = 39/151 (25.83%), Postives = 66/151 (43.71%), Query Frame = 0
BLAST of MS004701 vs. TAIR 10
Match: AT2G07240.1 (cysteine-type peptidases;cysteine-type peptidases ) HSP 1 Score: 45.1 bits (105), Expect = 7.5e-05 Identity = 24/84 (28.57%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of MS004701 vs. TAIR 10
Match: AT5G28810.1 (Domain of unknown function (DUF1985) ) HSP 1 Score: 43.1 bits (100), Expect = 2.9e-04 Identity = 21/53 (39.62%), Postives = 29/53 (54.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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