MS003471 (gene) Bitter gourd (TR) v1

Overview


Name	MS003471
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	sister chromatid cohesion 1 protein 2 isoform X1
Location	scaffold234: 3010107 .. 3014920 (-)
RNA-Seq Expression	MS003471
Synteny	MS003471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTACCTTGTCCTTGGCCTTGCCCGGATATACTCCAAAAAAGTTGAATATCTGTATATTGACTGCAATGGAGTGCTGACAGAAATCAACGAATTTGTGGTCAATACAAAGGAAGACACGAGAAAGGAAACTTTGCGAACACCTTACTACGCTATTACCATTCCTAAAAGATTTGAACTTGATGCGTTTGATCTGGGGATTCTCGAGGATGTTACTGGGTAGGTATTCGGTTAGTTAATCTCTCGGTTAGGCTTATCTTATGCATCTTTCATTATAATTATTTTTAACTTGAAGTTATCTAATTTTCAGAAGTAATGTGGCATCCCATGAAGAGATTACCCTTAAAGGTTCACTGTCTGTTTTACATTCTTCTGCTGATATTTATTTTTCATTTCCTTCTAACACTTCTACCTGCATCTTATGTAATTTATGCAGATAATGTGTGGAAAAATGATGTCATGCTGTCATTTGATGAGGCAAGTTTGTCATCATCATGCTTAGAACTTGAGTCAGACCTAAATTAATTTGATTGATGATGTTGGTTCTAGTGTTTCAACGCCACAATACTGTTCTGTTTGTATAATAGTTGTTAATGATTTTTGAGATACCTCTAGTCAATTTAAGAGTTTAACGTTAGAAGTTCAAATTTCATCAGACTTATAGTTGACAATTTTATCTCACTGCTGCAGAACCATCGCAAGGAAATCATTGCACTTCACAGTATTTGCTTTTCTGATGATACAGAGTATGAGGCTGAGCTCCCCTGTTACTTGATTTCAATATTCTATTTTCATTCTAAGTTGGGGAGAAAGTCTTTAATATTATTATTGCTTCAGTGTCTTTTCACTTCACCTCAAGGACATTGAGATGCAGGCAAGCACATCACATTACCACATTATGCCAGAAAATTCTCAAGTGAGTACATTCTCTCGAGTAAAATACGAGGTTGGGGTATCCACTGGAATTGATAGTGCACATCTAAAAGCAATCAAACTATTTGATGAAGATCATCAATCTGATGAAGGAGATCTATTGAAGGAGAAAATGCAGCAATATGAAGATGTAGTCCCTGAATCAAGCACTGAAATGTTTTTGGCTGATGGGTTTTCTTATGAAGAAAATGTAATTGTCAAGGCAATTTCTATTATAGAGGAAGAACATTCAGAGCATGTGAAATCATCTGATGAAGATCATCTGAGTGAGGGAATCTATAGGGAACACGATCGATCAGAAAATGAACTTGAGTTCATGAATGAAGACCATATTATCTGCAACTCAGAAAGAAGCATGGAGAACCTTAGAGATAATACTGTAACTCTAGTGGATAGCATGGATATTGATATGTCTTGTGGCGTGCAAAATGAACCTAAAAATCTTATTGAAATGGATAGTGAAGGGCATGATTTGGAAATTCTTGAAATGAAATCACCAGAAATGGAAGACCATGATGATGTTAGAAACAATCTTCAACTATCTATTTCAGTTGATGGAATTTCTGATCCCAAATTTCCAGATTTTGCAGGTGTGTAAAATTTTCCGACCCAAGTTCCACAATTTAAATGATTTATCTAGAATTTCATTATGTGCCATTTTGTCTCCAACCTTTCTTAGTGGAACAAATGCTTCTGTATTATTTTGACTACTCGAACCGTGTGTTATACTTATGCCTAGTGTGAAAATCTGTCCTATTTTTCCCATTTAGGTATCAAGACACCTGAGTTTACAACAATTTCGACACCAGCTAACAAGGAGAGACCTAGGGCAACAAGGAAAAGAAAATGCATTGTCGATGATAATATAGTTTTGTCTAATGAGTAAGTTATCATAACCTTTAAGTTGGATCTTGCAAATGTTAGACAGTTACTTTGGATTCCCAACCAATGTGTTTTCAACTGGTGTTGCATGTTTTGAAGGTCTGGACTCTGGATGGTTCCTGAAGAGATTGTGAGGATAAACTTTTTATATTTATAATACTTGAAGAGCACCTCGTTGTAGTTAGTGACTTGTAGAAAAAAATTGAATGCCTTTTGCCCTCGAATGTTAGAAAACCAGTAGCCTGATTTTTCACCTTAATTCTGGGTTAGATCAGATCTATTGCTGAACAATTGTCTTCTTTTGAATAACAAATGAGATAATATGTTGCTAAATTATTTCAGGACACTTAAGCAAAGCATATATGATGCAAGTGACTTGGTTTCAAAAAGAAGAAAATGTCCTCATAGTGCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAATCTCTCCTTTGGTTTCTCGGTGCCTTTGATGTCCTGTAAGTTTTTGAGACTCTCGCTTGTGTTTTTTTTAAGTCATACTTAATATTAATAAGCAAAAAGTTTATTTGGAAAATTAATCTTATAGACAGTTTCTGAAAGCTTTTTTTTGTTTTAAATAATAAATATATATATGTAAAGATAAAATAAAAAGACACTTTTTTGTCGTCTGATGGTGGTTTTCTACAGGTGTTTCGTCAGATCTTAGGTCCCTCCTTTCTGAGACCAGAGTGAATATATCACAATCTGCTGAAATGTTGAAATCTCCTGAAAACTTGGATGCTCCAAGTTCCCCGGTTCTTCACATGCTAGTAAAAATAGATAGCCCTGTAACAATTTTAAAAAATGGAGAACATTCAAATGCACCGGAGATATCTGGATCTATAACTACCAACAGGTTGGAGCAAACTATGACTTGTGTAGACAGAGTTTCTGAATCTTCTGTCCTGGAACAGTTGTCCACATCAGAACCTCAAACTTCAGGTAGACTTGAGCAAATATCAGTGGCACCTGGAACACCTCAAACTTCAGGTAGACTTGAGCAAATATCAATCGCACCCGGAACACCTCAAACTTCAGGTAGGCTTGAGCAGATATCAATAGCACCCGGAACACCTGTTCGGTGCCCAACATCAGCTAGATCATTTGGGAGTCCAGAGAGTCCTAAAGTTCCTAACTCGAATGCTGTAAGGCTTGTGAATTTTTTAAAATTGTACAGCAAACGTATATCTTGTCAATTACCAAGGACTTTATCTTCATTCATGTTTTAAATGAGAGTCCATGTTAGTCACACTGATAGACTGGATAATATCAGATACCAAACTTACTTGAGGCCAATTGTAGCCATTTTATTTGCAGTTTCCATAATGGATATTTGTAAATATACCCTTTGATGATTCCTAATTTCCCCCCCTTCGTTTGGCAGATAAGGTTTTGTGAAGCGGATGAGATAGAATCTGGTAAGGAGCATCACGAAGCGTTTTATTGTGTTATTCAGGAATTTATTTATAGGTTATATATTTAATGTTGGATTTTTTTTAATTATTGTAGATGGATGGTCTGGGAGAACCAGGTAAAGTGGATTGGGTTGTGTGGTCTTCACATTTCTCGTCTGCTCTACATTTCATTCCCACTTGATTTTAACTTCTTAAACCTCTGATGACACAGAATGGTAGCCGAATATCTTCTCCAAAATTTTACAAGTAGAAGGGTGGAAAGTGTGGAAAAGGTTGTAAATTTATCACACCTTCTTAGAGAAAAGACTAGAAAAGAGAGTTCAAGTGTATTCTACGAGATATTGGTATGTTTCATCTTCTTTTGTTTTGATTTTCTTATTTTATTCTGAGTCGTTTTCTGATTTTTCATTTTTCTTCTTGTTGTTTGATAATGGGTAGTGCGTGTTGAAGTGTATTTCTCTGAGGTATTGTCACCTTTTCTGAAAAGGGACTTTGATGCATTTTAGGCATATGGGCGTTATTATATAATTTCGTTAAAAATGTTGACAAGATTATATTAGATTATTATCTGAATCGTTCACCTGGTTTTGCAACCTCCCCAGCATTTTCAGAAAACTCTCTCAATGAAACTATACTGATTGTTTTCATTAAAATGGTAAAAAGTTACAAAGTTCTGAACTTCCTTATATTAGTATACAAAGATCCTCTACAATCTGAACGATTGCAAGAAAGAGTCAGAAATTATATTTGAAGTAACCCCCAAAGTTCGTCAATCAGCAATAAAAGAACATTCAAACAACAAACCCAACAAATTAAAGGAGCCCGTGGTGGATTACCATCGAACCCATAATGGACAAAATCTAGCCGAAAACTCAACCATCAAGATATAACCGAACAAGACCAAAATGGGTATTTTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTTATTTTTTATTTTTAACAAAACCCTAGAAAGTTAGAAAGGAAATTCCATATAGCCGTTATCTTTAGAAAGACTTCTGAAGAGAGACATGCAACGTAGGGCTGATACAAGGATAAGAAAAATGAAGCTTTGAAAAAGTTTAGCTGTAATGCATTGAACCGAAATGAATTTGCATAGTGGTCATTCCTATCTATAGTGACAACTCATCTGAAATATTAGACTCTTGCAAGTTTTTTCTGATAACCAGATATTGTAGCGTTGTAGACTCGTATGCTTTGAAAAAGTTTAGCCATAAAAACTAAAGACATTGTGATTGATTTCATACTTCATATTGAATTATTAGTACAGTTTGGTTCTCACATGCTCTGTTGTCAGCGCTTGATCCATCATTCTGTGGTAAAAAAACATGCCAAGCGCTGTGAAATCCCCTGTTTTTCATATTAAACCATTACAATCGTTGGTGCGAGGGGTGACATTCAAATATGATACTGCAGGTACTGAAAACGAAAGACTGCGTGGATGTGAAACAGGATCATGCCTACGGTGACATCTTAGTATGGAAATTGCCAAACTGGGGCACAGCTTTTGGAACTGGTTTGTCCATCGCGCATGACGAC

mRNA sequence

ATGGCCTACCTTGTCCTTGGCCTTGCCCGGATATACTCCAAAAAAGTTGAATATCTGTATATTGACTGCAATGGAGTGCTGACAGAAATCAACGAATTTGTGGTCAATACAAAGGAAGACACGAGAAAGGAAACTTTGCGAACACCTTACTACGCTATTACCATTCCTAAAAGATTTGAACTTGATGCGTTTGATCTGGGGATTCTCGAGGATGTTACTGGTTCAAATTTCATCAGACTTATAGTTGACAATTTTATCTCACTGCTGCAGAACCATCGCAAGGAAATCATTGCACTTCACAGTATTTGCTTTTCTGATGATACAGATGTCTTTTCACTTCACCTCAAGGACATTGAGATGCAGGCAAGCACATCACATTACCACATTATGCCAGAAAATTCTCAAGTGAGTACATTCTCTCGAGTAAAATACGAGGTTGGGGTATCCACTGGAATTGATAGTGCACATCTAAAAGCAATCAAACTATTTGATGAAGATCATCAATCTGATGAAGGAGATCTATTGAAGGAGAAAATGCAGCAATATGAAGATGTAGTCCCTGAATCAAGCACTGAAATGTTTTTGGCTGATGGGTTTTCTTATGAAGAAAATGTAATTGTCAAGGCAATTTCTATTATAGAGGAAGAACATTCAGAGCATGTGAAATCATCTGATGAAGATCATCTGAGTGAGGGAATCTATAGGGAACACGATCGATCAGAAAATGAACTTGAGTTCATGAATGAAGACCATATTATCTGCAACTCAGAAAGAAGCATGGAGAACCTTAGAGATAATACTGTAACTCTAGTGGATAGCATGGATATTGATATGTCTTGTGGCGTGCAAAATGAACCTAAAAATCTTATTGAAATGGATAGTGAAGGGCATGATTTGGAAATTCTTGAAATGAAATCACCAGAAATGGAAGACCATGATGATGTTAGAAACAATCTTCAACTATCTATTTCAGTTGATGGAATTTCTGATCCCAAATTTCCAGATTTTGCAGGTATCAAGACACCTGAGTTTACAACAATTTCGACACCAGCTAACAAGGAGAGACCTAGGGCAACAAGGAAAAGAAAATGCATTGTCGATGATAATATAGTTTTGTCTAATGAGACACTTAAGCAAAGCATATATGATGCAAGTGACTTGGTTTCAAAAAGAAGAAAATGTCCTCATAGTGCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAATCTCTCCTTTGGTTTCTCGGTGCCTTTGATGTCCTGTGTTTCGTCAGATCTTAGGTCCCTCCTTTCTGAGACCAGAGTGAATATATCACAATCTGCTGAAATGTTGAAATCTCCTGAAAACTTGGATGCTCCAAGTTCCCCGGTTCTTCACATGCTAGTAAAAATAGATAGCCCTGTAACAATTTTAAAAAATGGAGAACATTCAAATGCACCGGAGATATCTGGATCTATAACTACCAACAGGTTGGAGCAAACTATGACTTGTGTAGACAGAGTTTCTGAATCTTCTGTCCTGGAACAGTTGTCCACATCAGAACCTCAAACTTCAGGTAGGCTTGAGCAGATATCAATAGCACCCGGAACACCTGTTCGGTGCCCAACATCAGCTAGATCATTTGGGAGTCCAGAGAGTCCTAAAGTTCCTAACTCGAATGCTGTAAGGCTTGTGAATTTTTTAAAATTGTACAGCAAACGTATATCTTGTCAATTACCAAGGACTTTATCTTCATTCATAATGGTAGCCGAATATCTTCTCCAAAATTTTACAAGTAGAAGGGTGGAAAGTGTGGAAAAGGTTGTAAATTTATCACACCTTCTTAGAGAAAAGACTAGAAAAGAGAGTTCAAGTGTATTCTACGAGATATTGGTACTGAAAACGAAAGACTGCGTGGATGTGAAACAGGATCATGCCTACGGTGACATCTTAGTATGGAAATTGCCAAACTGGGGCACAGCTTTTGGAACTGGTTTGTCCATCGCGCATGACGAC

Coding sequence (CDS)

ATGGCCTACCTTGTCCTTGGCCTTGCCCGGATATACTCCAAAAAAGTTGAATATCTGTATATTGACTGCAATGGAGTGCTGACAGAAATCAACGAATTTGTGGTCAATACAAAGGAAGACACGAGAAAGGAAACTTTGCGAACACCTTACTACGCTATTACCATTCCTAAAAGATTTGAACTTGATGCGTTTGATCTGGGGATTCTCGAGGATGTTACTGGTTCAAATTTCATCAGACTTATAGTTGACAATTTTATCTCACTGCTGCAGAACCATCGCAAGGAAATCATTGCACTTCACAGTATTTGCTTTTCTGATGATACAGATGTCTTTTCACTTCACCTCAAGGACATTGAGATGCAGGCAAGCACATCACATTACCACATTATGCCAGAAAATTCTCAAGTGAGTACATTCTCTCGAGTAAAATACGAGGTTGGGGTATCCACTGGAATTGATAGTGCACATCTAAAAGCAATCAAACTATTTGATGAAGATCATCAATCTGATGAAGGAGATCTATTGAAGGAGAAAATGCAGCAATATGAAGATGTAGTCCCTGAATCAAGCACTGAAATGTTTTTGGCTGATGGGTTTTCTTATGAAGAAAATGTAATTGTCAAGGCAATTTCTATTATAGAGGAAGAACATTCAGAGCATGTGAAATCATCTGATGAAGATCATCTGAGTGAGGGAATCTATAGGGAACACGATCGATCAGAAAATGAACTTGAGTTCATGAATGAAGACCATATTATCTGCAACTCAGAAAGAAGCATGGAGAACCTTAGAGATAATACTGTAACTCTAGTGGATAGCATGGATATTGATATGTCTTGTGGCGTGCAAAATGAACCTAAAAATCTTATTGAAATGGATAGTGAAGGGCATGATTTGGAAATTCTTGAAATGAAATCACCAGAAATGGAAGACCATGATGATGTTAGAAACAATCTTCAACTATCTATTTCAGTTGATGGAATTTCTGATCCCAAATTTCCAGATTTTGCAGGTATCAAGACACCTGAGTTTACAACAATTTCGACACCAGCTAACAAGGAGAGACCTAGGGCAACAAGGAAAAGAAAATGCATTGTCGATGATAATATAGTTTTGTCTAATGAGACACTTAAGCAAAGCATATATGATGCAAGTGACTTGGTTTCAAAAAGAAGAAAATGTCCTCATAGTGCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAATCTCTCCTTTGGTTTCTCGGTGCCTTTGATGTCCTGTGTTTCGTCAGATCTTAGGTCCCTCCTTTCTGAGACCAGAGTGAATATATCACAATCTGCTGAAATGTTGAAATCTCCTGAAAACTTGGATGCTCCAAGTTCCCCGGTTCTTCACATGCTAGTAAAAATAGATAGCCCTGTAACAATTTTAAAAAATGGAGAACATTCAAATGCACCGGAGATATCTGGATCTATAACTACCAACAGGTTGGAGCAAACTATGACTTGTGTAGACAGAGTTTCTGAATCTTCTGTCCTGGAACAGTTGTCCACATCAGAACCTCAAACTTCAGGTAGGCTTGAGCAGATATCAATAGCACCCGGAACACCTGTTCGGTGCCCAACATCAGCTAGATCATTTGGGAGTCCAGAGAGTCCTAAAGTTCCTAACTCGAATGCTGTAAGGCTTGTGAATTTTTTAAAATTGTACAGCAAACGTATATCTTGTCAATTACCAAGGACTTTATCTTCATTCATAATGGTAGCCGAATATCTTCTCCAAAATTTTACAAGTAGAAGGGTGGAAAGTGTGGAAAAGGTTGTAAATTTATCACACCTTCTTAGAGAAAAGACTAGAAAAGAGAGTTCAAGTGTATTCTACGAGATATTGGTACTGAAAACGAAAGACTGCGTGGATGTGAAACAGGATCATGCCTACGGTGACATCTTAGTATGGAAATTGCCAAACTGGGGCACAGCTTTTGGAACTGGTTTGTCCATCGCGCATGACGAC

Protein sequence

MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFELDAFDLGILEDVTGSNFIRLIVDNFISLLQNHRKEIIALHSICFSDDTDVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTILKNGEHSNAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD

Homology

[Close]

BLAST of MS003471 vs. NCBI nr
Match: XP_022134001.1 (sister chromatid cohesion 1 protein 2 isoform X1 [Momordica charantia] >XP_022134002.1 sister chromatid cohesion 1 protein 2 isoform X2 [Momordica charantia])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 630/707 (89.11%), Postives = 637/707 (90.10%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE
Sbjct: 57  MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 116

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDN------FISLLQNHRKEIIALHSICFSDDTDV 120
           LDAFDLGILEDVTGSN        + DN       +S  +NHRKEIIALHSICFSDDTDV
Sbjct: 117 LDAFDLGILEDVTGSNVASHEEITLKDNVWKNDVMLSFDENHRKEIIALHSICFSDDTDV 176

Query: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180
           FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD
Sbjct: 177 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 236

Query: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240
           EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS
Sbjct: 237 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 296

Query: 241 EGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLI 300
           EGIYRE DRSENELEFMNEDHIICNSERSMENLRDNT+TLVDSMDIDMSCGVQNEPKNLI
Sbjct: 297 EGIYREQDRSENELEFMNEDHIICNSERSMENLRDNTITLVDSMDIDMSCGVQNEPKNLI 356

Query: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360
           EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP
Sbjct: 357 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 416

Query: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420
           ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL
Sbjct: 417 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 476

Query: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480
           SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI
Sbjct: 477 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 536

Query: 481 LKNGEHSNAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSE---------------- 540
           LKNGEHSNAPEISGSITTNR EQTMTCVDRVSESSVLEQLSTSE                
Sbjct: 537 LKNGEHSNAPEISGSITTNRSEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISVAPGT 596

Query: 541 ----------------PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLV 600
                           PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNA+R  
Sbjct: 597 PQTSGRLEQISIAPGTPQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAIRFC 656

Query: 601 NFLKLYSKRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660
              ++ S   S    RT     MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS
Sbjct: 657 EADEIESDGWS---GRTR----MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 716

Query: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 666
           VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD
Sbjct: 717 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 756

[Close]

BLAST of MS003471 vs. NCBI nr
Match: XP_022134003.1 (sister chromatid cohesion 1 protein 2 isoform X3 [Momordica charantia])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 630/707 (89.11%), Postives = 637/707 (90.10%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE
Sbjct: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDN------FISLLQNHRKEIIALHSICFSDDTDV 120
           LDAFDLGILEDVTGSN        + DN       +S  +NHRKEIIALHSICFSDDTDV
Sbjct: 61  LDAFDLGILEDVTGSNVASHEEITLKDNVWKNDVMLSFDENHRKEIIALHSICFSDDTDV 120

Query: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180
           FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD
Sbjct: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180

Query: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240
           EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS
Sbjct: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240

Query: 241 EGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLI 300
           EGIYRE DRSENELEFMNEDHIICNSERSMENLRDNT+TLVDSMDIDMSCGVQNEPKNLI
Sbjct: 241 EGIYREQDRSENELEFMNEDHIICNSERSMENLRDNTITLVDSMDIDMSCGVQNEPKNLI 300

Query: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360
           EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP
Sbjct: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360

Query: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420
           ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL
Sbjct: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420

Query: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480
           SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI
Sbjct: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480

Query: 481 LKNGEHSNAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSE---------------- 540
           LKNGEHSNAPEISGSITTNR EQTMTCVDRVSESSVLEQLSTSE                
Sbjct: 481 LKNGEHSNAPEISGSITTNRSEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISVAPGT 540

Query: 541 ----------------PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLV 600
                           PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNA+R  
Sbjct: 541 PQTSGRLEQISIAPGTPQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAIRFC 600

Query: 601 NFLKLYSKRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660
              ++ S   S    RT     MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS
Sbjct: 601 EADEIESDGWS---GRTR----MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660

Query: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 666
           VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD
Sbjct: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 700

[Close]

BLAST of MS003471 vs. NCBI nr
Match: XP_038884214.1 (LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 2 [Benincasa hispida])

HSP 1 Score: 814.7 bits (2103), Expect = 5.9e-232
Identity = 464/680 (68.24%), Postives = 526/680 (77.35%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLYIDCN VLTEINEFVV TK  T     +TP +AIT+PKRFE
Sbjct: 57  MAYLLLGIARIYSKKVEYLYIDCNKVLTEINEFVVRTKNSTN----QTPCFAITLPKRFE 116

Query: 61  LDAFDLGILEDVTGSNF-----IRL---IVDNFISLL--QNHRKEIIALHSICFSDDT-- 120
           LD FDLGILED+T S+      I L   I  N I LL  +NH +EI ALHSI +SDDT  
Sbjct: 117 LDKFDLGILEDLTRSHMASHEEITLRDNIWKNDIMLLLDENHGQEITALHSIRYSDDTIF 176

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLKDIEMQASTSH+HIMPE  QVSTFS  KYEV VSTGI+ AHLKAI+ FDEDH
Sbjct: 177 EDVFSPHLKDIEMQASTSHHHIMPEKCQVSTFSDEKYEVEVSTGIEDAHLKAIEQFDEDH 236

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM QY + VPE+STEM L + FS+E+ ++VK +S IE E SE+VKSSD+D
Sbjct: 237 RSDEEETWKEKMLQYRNAVPEASTEMVLTNRFSHEKIIMVKTVSTIERESSENVKSSDKD 296

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
           + SEG+YRE  RSENELEF+N  + I  SERS+E LRDNT+TL+D MDIDMS G QNEP 
Sbjct: 297 YQSEGMYREQIRSENELEFINGGNNINTSERSIEKLRDNTITLLDGMDIDMSWGAQNEPT 356

Query: 301 NLIEMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTI 360
            LI MDSEG +L+ LEM+SP+M+D D  RN+L LSIS+DG+ D K PDF G K PEFTTI
Sbjct: 357 KLIVMDSEGDNLKFLEMQSPKMKDCDGSRNDLPLSISLDGVFDSKIPDFTGTKAPEFTTI 416

Query: 361 STPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQI 420
           STPANKERPR +RKRKC VDD IVL NE LK+SIYDASDLVSKRRKCP SALTAWKASQI
Sbjct: 417 STPANKERPRTSRKRKCTVDDTIVLPNEKLKRSIYDASDLVSKRRKCPCSALTAWKASQI 476

Query: 421 SNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSP 480
           S LS GFS+PLMSCVSS+LRSLLSET+VNIS+S E++K P NLD PSSP  HMLVK+D P
Sbjct: 477 SRLSSGFSIPLMSCVSSELRSLLSETKVNISKSTELVKFPGNLDVPSSPAFHMLVKMDIP 536

Query: 481 VTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQIS 540
            T L+ GEHSN PEISGSIT  R EQ   CVDR  VSE+SVL QLS SEPQTS  LEQI+
Sbjct: 537 FTTLETGEHSNEPEISGSITMYRSEQITACVDRVAVSEASVL-QLSISEPQTSDGLEQIA 596

Query: 541 IAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAEY 600
           IAPGTPVRC TSAR F SP+SPKVPNS+A   + F ++          RT     MVAEY
Sbjct: 597 IAPGTPVRCSTSARLFRSPDSPKVPNSSA--QIRFCEVDEPETDGGSGRTR----MVAEY 656

Query: 601 LLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDILV 660
           LLQ        S+E+ VNLSHLL +KTRKES+ VFYEILVLKTKDCVDVKQD AYGDILV
Sbjct: 657 LLQ-------RSLEEAVNLSHLLSDKTRKESAGVFYEILVLKTKDCVDVKQDCAYGDILV 716

Query: 661 WKLPNWGTAFGTGLSIAHDD 666
           WKLPNW  AFGT LSI  +D
Sbjct: 717 WKLPNWXAAFGTSLSITCED 718

[Close]

BLAST of MS003471 vs. NCBI nr
Match: XP_008441366.1 (PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 1.7e-231
Identity = 462/681 (67.84%), Postives = 529/681 (77.68%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLY DCN VLTEINEFVV TK  TRK T  TPYYAIT+P+RFE
Sbjct: 57  MAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFE 116

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDNF------ISLLQNHRKEIIALHSICFSDDT-- 120
           LD FDLGI+ED+TGS+ +      + DN       +SL QNH +EI ALHS+C SD T  
Sbjct: 117 LDEFDLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIF 176

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLK+IEMQAST H+HIMPE  Q+ST S  +YEV VST I+SA +KAI+ FDEDH
Sbjct: 177 EDVFSPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDH 236

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM Q+E+VVPE+STEM L + FSYEE V VK +SI E E SE+VK S ED
Sbjct: 237 RSDEEETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSRED 296

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
             SEG+ RE  +S+NE EF+N  + I  SERS+E LRDNT+TL+DSMDIDMS G Q EP 
Sbjct: 297 CHSEGMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPM 356

Query: 301 NLIEMDS-EGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTT 360
            LI   S EG +L+  EM+SPEM+D D  RN+ QLSIS+DG+ D +FPDF G KTPEFTT
Sbjct: 357 KLIGTGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTT 416

Query: 361 ISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQ 420
           ISTPANKERPR +RKRKCIVDD IVL NE LK+SIYDA DLVSKRRKCP SALTAWKASQ
Sbjct: 417 ISTPANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQ 476

Query: 421 ISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDS 480
           IS LSFGFS+PLMSCVS +LRSL  ET VNIS+S E++KSPENLD PSSP  H LVK+DS
Sbjct: 477 ISRLSFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDS 536

Query: 481 PVTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQI 540
           PVTI K GEHSN PEISGSI T R EQ  TCVDR  VSE+SVLE LSTSEPQ S  LEQI
Sbjct: 537 PVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQI 596

Query: 541 SIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAE 600
           +IAPGTPVRC TSAR F SP+SPKV NSNA++     +L +   S    RT     MVAE
Sbjct: 597 AIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWS---GRTR----MVAE 656

Query: 601 YLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDIL 660
           YLLQNFT++R++S E+ VNLSHLL  KTRKES+ +FYEILVLKTKDCVDVKQD AYGDIL
Sbjct: 657 YLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDIL 716

Query: 661 VWKLPNWGTAFGTGLSIAHDD 666
           VWKL NW TAFG+GLSI  +D
Sbjct: 717 VWKLSNWSTAFGSGLSIMCED 727

[Close]

BLAST of MS003471 vs. NCBI nr
Match: KAA0056598.1 (sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 813.1 bits (2099), Expect = 1.7e-231
Identity = 462/681 (67.84%), Postives = 529/681 (77.68%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLY DCN VLTEINEFVV TK  TRK T  TPYYAIT+P+RFE
Sbjct: 23  MAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFE 82

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDNF------ISLLQNHRKEIIALHSICFSDDT-- 120
           LD FDLGI+ED+TGS+ +      + DN       +SL QNH +EI ALHS+C SD T  
Sbjct: 83  LDEFDLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIF 142

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLK+IEMQAST H+HIMPE  Q+ST S  +YEV VST I+SA +KAI+ FDEDH
Sbjct: 143 EDVFSPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDH 202

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM Q+E+VVPE+STEM L + FSYEE V VK +SI E E SE+VK S ED
Sbjct: 203 RSDEEETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSRED 262

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
             SEG+ RE  +S+NE EF+N  + I  SERS+E LRDNT+TL+DSMDIDMS G Q EP 
Sbjct: 263 CHSEGMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPM 322

Query: 301 NLIEMDS-EGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTT 360
            LI   S EG +L+  EM+SPEM+D D  RN+ QLSIS+DG+ D +FPDF G KTPEFTT
Sbjct: 323 KLIGTGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTT 382

Query: 361 ISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQ 420
           ISTPANKERPR +RKRKCIVDD IVL NE LK+SIYDA DLVSKRRKCP SALTAWKASQ
Sbjct: 383 ISTPANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQ 442

Query: 421 ISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDS 480
           IS LSFGFS+PLMSCVS +LRSL  ET VNIS+S E++KSPENLD PSSP  H LVK+DS
Sbjct: 443 ISRLSFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDS 502

Query: 481 PVTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQI 540
           PVTI K GEHSN PEISGSI T R EQ  TCVDR  VSE+SVLE LSTSEPQ S  LEQI
Sbjct: 503 PVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQI 562

Query: 541 SIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAE 600
           +IAPGTPVRC TSAR F SP+SPKV NSNA++     +L +   S    RT     MVAE
Sbjct: 563 AIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWS---GRTR----MVAE 622

Query: 601 YLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDIL 660
           YLLQNFT++R++S E+ VNLSHLL  KTRKES+ +FYEILVLKTKDCVDVKQD AYGDIL
Sbjct: 623 YLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDIL 682

Query: 661 VWKLPNWGTAFGTGLSIAHDD 666
           VWKL NW TAFG+GLSI  +D
Sbjct: 683 VWKLSNWSTAFGSGLSIMCED 693

[Close]

BLAST of MS003471 vs. ExPASy Swiss-Prot
Match: Q9FQ20 (Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana OX=3702 GN=SYN2 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-38
Identity = 201/759 (26.48%), Postives = 322/759 (42.42%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKET-----LRTPYYAITI 60
           +AYL+LG+ RIYSKKV++L+ DCN  L  + EFV   KE  R++T          ++I +
Sbjct: 57  LAYLLLGVVRIYSKKVDFLFDDCNKALIGVKEFV--AKERNREKTGVSLPASIECFSIAL 116

Query: 61  PKRFELDAFDLGILEDVTGSNFIRLIVDNFI--SLLQNHRKEIIALHSICFSDDT----- 120
           P+RFELDAFDLG+LED  G N ++   D  +     +  R ++ ++      +D      
Sbjct: 117 PERFELDAFDLGVLEDFHGGN-VKPHEDITLKDGSQETERMDMYSMERFDMEEDLLFTFH 176

Query: 121 DVFSLHLKDIEMQASTSHYHIMPENSQVSTFS---RVKYEVGVSTGIDSAHLKAIKLFDE 180
           + FS +  + + ++      +  EN + +T     RV     + +   S   +      E
Sbjct: 177 ETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASRHRE 236

Query: 181 DHQSDEGDLLKE-------KMQQYEDVV--------------PESSTEMFLADGF--SYE 240
           D +SD  D+L E       ++ Q ED V               ESS +    DG   + E
Sbjct: 237 DPESD--DILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENLE 296

Query: 241 ENVIVKAISIIEEEHSEHVKSSDEDHLSEGIYREHDRSENELEFMNEDHI---------- 300
                K  S  E +H   + S  E  + E I+   D+         E  I          
Sbjct: 297 SEKTSKKTSCEEMQHDRSLPS--ECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPE 356

Query: 301 ---ICNS---ERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDLEILEMKS 360
              +  S   +  +E  RD+     +  D ++  G   E     E++  G +   L   +
Sbjct: 357 PVSVTGSRDLQEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMT 416

Query: 361 PEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRATRKRKCIV 420
              +D     N     ++V   +  +     G  +P+F+ I TPA KE  R +RKRKC++
Sbjct: 417 VS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLI 476

Query: 421 DDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLMSCVSSDL 480
           DD +++ N+ +K+ I D+S L++KRR  PH+     +  + +N    F  PL+   SSDL
Sbjct: 477 DDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSSDL 536

Query: 481 RSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTILKNGEHSNAPEI---- 540
           +SL  +  + +   A    +P++           L  + SP  IL + +  N  EI    
Sbjct: 537 QSLFCQP-IKLKNWA-TTGTPKDTKIARHKEKSSLDTVRSPGVILSSDQTENTQEIMETP 596

Query: 541 -----------------------SGSITTNRLEQTMTCVDRVSESSVL---EQLSTSE-- 600
                                  + S T+    QT    +   + SV+     + TSE  
Sbjct: 597 QAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSEQT 656

Query: 601 ---PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYS------ 649
              P+T    EQ+ IAP TPVR   S R F  P +    +  A    +F +  S      
Sbjct: 657 VIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYVEN 716

[Close]

BLAST of MS003471 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-10
Identity = 158/700 (22.57%), Postives = 276/700 (39.43%), Query Frame = 0


Query: 2   AYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFEL 61
           ++L++G+ RIYSKKV+YLY D N + T + +  V+T+ +  ++  + P  ++T+P+   L
Sbjct: 57  SHLLVGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNL 116

Query: 62  DAFDL-GILEDVTGSNFIRLIVDNFISLLQNHRKEIIALHSICFSDDTDVFSLHLKDIEM 121
           D FDL     D+   N  R   D  I+L       I    ++ F +D    S+ + D++ 
Sbjct: 117 DEFDLEDDTLDMEFDNHTRSEED--ITLTDQIPTGIDPYVAVTFDEDIISESIPM-DVDQ 176

Query: 122 QASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSDEGDLLKEKMQ 181
                  H             +  E    TG D+    +   FD    S           
Sbjct: 177 STEPVSRHT----------GEIDVETAHETGPDNEPRDSNIAFDTGTYS----------- 236

Query: 182 QYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDE-DHLSEGIYREHDR 241
                 P + TE F       + N+  + I   E   +    +  E + + +  +     
Sbjct: 237 ------PRNVTEEFTEVQDPRQSNLTEERIPNSERNDATSPGTVPEIERMRDAAHDLSPT 296

Query: 242 SENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDL 301
           S        +D  +  +E   E L +   T + S+D +M             ++S  H  
Sbjct: 297 SHPSFAAQQQDVRVERTESLDETLNEKEPT-IPSIDEEM-------------LNSGRHSA 356

Query: 302 EILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRAT 361
             L   SP                S  G S+ +  DF    +P+     +P  + + RA 
Sbjct: 357 FELRSGSPG---------------SAAG-SEEERADFVH-PSPQLVLQPSPPPQPQRRA- 416

Query: 362 RKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLM 421
           RKRK   D   VL+N+ + + + D SD + KR+K P S L  W+ +  S     F+ PL 
Sbjct: 417 RKRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNNQSRKDQNFNEPLF 476

Query: 422 SCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPS--SPVLHMLVKIDSPVTILKNGEHS 481
           +  S DLR++  +  V  +    +  S E L  P+  SP     V+I +PV+ + +  + 
Sbjct: 477 TGFSDDLRNVFEKDYV--ASKPHLAVSDETLPEPASVSPTREAEVEI-NPVSPIPDSTNP 536

Query: 482 NAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISIA------PGTP 541
           ++     ++  +  +QT   +D         +   +E Q+    +   +        G P
Sbjct: 537 DS-----TVQLSPAQQTEDVLDSAGPRPAHAESVATEAQSPRTFDNDDMGIEHLRDGGFP 596

Query: 542 VRCPT--------------------SARSFGS-PESPKVPNSNAVRLVNFLKLYSKRISC 601
           V  P+                       S+ + P +  VP     +    L   S+R   
Sbjct: 597 VYMPSPPPRSSPFRTDDFTTQSGNWETESYRTEPSTSTVPEDLPGQRNLGLSPVSERTDE 656

Query: 602 QL-------------PRTLSSFIM------VAEYLLQNFTSRRVESVEKV--VNLSHLLR 650
           +L             P +  S  +      +A+YL Q  +S    S      ++LS +L 
Sbjct: 657 ELYFLEVGGNSPVGTPASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILA 685

[Close]

BLAST of MS003471 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-04
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 582  VAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYG 641
            VA+Y LQ    +  E+ + V+    LL  KTRKE+S +F+E LVLKT+D + V+Q   Y 
Sbjct: 958  VAKY-LQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQGKPYE 1017

Query: 642  DILVWKLP 650
             I++   P
Sbjct: 1018 SIIIKPRP 1024

HSP 2 Score: 46.6 bits (109), Expect = 1.3e-03
Identity = 85/360 (23.61%), Postives = 145/360 (40.28%), Query Frame = 0


Query: 2   AYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFEL 61
           ++L+LG+ RIYS+KV YL+ DC+  L ++ +   +   D   E    PY++IT+P+ F+L
Sbjct: 57  SHLLLGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDL 116

Query: 62  DAFDLGILEDVTGSNFIRLIVDNFISLLQNHRKEIIALHSICFSDDTDVFSLHLKDIEMQ 121
           D F+L   E   G+      VD+ +S      KE I L               L +    
Sbjct: 117 DDFELPDNEIFQGN-----YVDHHVS-----TKEQITLQDTMDGVVYSTSQFGLDERFGD 176

Query: 122 ASTSHYHIMPENSQVSTFSRVKYEVGVSTGID-SAHLKAIKLFDEDHQSDEGDLLKEKMQ 181
             TS   +  + +       +  +     GID +A+L A     +D      + +     
Sbjct: 177 GDTSQAALDLDEAVFQDKDVIGSDDEGVPGIDHNAYLDAAAPGIKDSMEGVSEAMPMDFN 236

Query: 182 QYEDVVPESSTEMFLADGFSYEENVIVK---AISIIEEEHSEHVKSSDEDHLSEGIYREH 241
           + E V   +    F+ D  + +   +V+   + S+ E+   +     ++ +  EGI    
Sbjct: 237 E-EQVEDLAMNNEFIEDAQAPQTPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSG 296

Query: 242 DRSENELEFMNEDHIICNSERSMENLRDNTVT--LVDSMDIDMSCGVQNEPKNLIEMDSE 301
           + + NE+    ED        S  N  ++ VT   VD   ID +   QNEP+   E    
Sbjct: 297 ELNANEMPKRGED------LSSEYNAPESAVTPVEVDKSQIDENVNTQNEPEE--ERAEH 356

Query: 302 GH-DLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKE 355
            H         + EMED   V N    ++  D        +  G +  +   I+T  N+E
Sbjct: 357 VHVTSPCCSHITTEMEDPGQVMNEAGANVVPDKPDAVPPLETPGEENRDHFAIATEVNQE 397

[Close]

BLAST of MS003471 vs. ExPASy TrEMBL
Match: A0A6J1BYC1 (sister chromatid cohesion 1 protein 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006387 PE=3 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 630/707 (89.11%), Postives = 637/707 (90.10%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE
Sbjct: 57  MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 116

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDN------FISLLQNHRKEIIALHSICFSDDTDV 120
           LDAFDLGILEDVTGSN        + DN       +S  +NHRKEIIALHSICFSDDTDV
Sbjct: 117 LDAFDLGILEDVTGSNVASHEEITLKDNVWKNDVMLSFDENHRKEIIALHSICFSDDTDV 176

Query: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180
           FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD
Sbjct: 177 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 236

Query: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240
           EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS
Sbjct: 237 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 296

Query: 241 EGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLI 300
           EGIYRE DRSENELEFMNEDHIICNSERSMENLRDNT+TLVDSMDIDMSCGVQNEPKNLI
Sbjct: 297 EGIYREQDRSENELEFMNEDHIICNSERSMENLRDNTITLVDSMDIDMSCGVQNEPKNLI 356

Query: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360
           EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP
Sbjct: 357 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 416

Query: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420
           ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL
Sbjct: 417 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 476

Query: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480
           SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI
Sbjct: 477 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 536

Query: 481 LKNGEHSNAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSE---------------- 540
           LKNGEHSNAPEISGSITTNR EQTMTCVDRVSESSVLEQLSTSE                
Sbjct: 537 LKNGEHSNAPEISGSITTNRSEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISVAPGT 596

Query: 541 ----------------PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLV 600
                           PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNA+R  
Sbjct: 597 PQTSGRLEQISIAPGTPQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAIRFC 656

Query: 601 NFLKLYSKRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660
              ++ S   S    RT     MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS
Sbjct: 657 EADEIESDGWS---GRTR----MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 716

Query: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 666
           VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD
Sbjct: 717 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 756

[Close]

BLAST of MS003471 vs. ExPASy TrEMBL
Match: A0A6J1C0U1 (sister chromatid cohesion 1 protein 2 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006387 PE=3 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 630/707 (89.11%), Postives = 637/707 (90.10%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE
Sbjct: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDN------FISLLQNHRKEIIALHSICFSDDTDV 120
           LDAFDLGILEDVTGSN        + DN       +S  +NHRKEIIALHSICFSDDTDV
Sbjct: 61  LDAFDLGILEDVTGSNVASHEEITLKDNVWKNDVMLSFDENHRKEIIALHSICFSDDTDV 120

Query: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180
           FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD
Sbjct: 121 FSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSD 180

Query: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240
           EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS
Sbjct: 181 EGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDEDHLS 240

Query: 241 EGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLI 300
           EGIYRE DRSENELEFMNEDHIICNSERSMENLRDNT+TLVDSMDIDMSCGVQNEPKNLI
Sbjct: 241 EGIYREQDRSENELEFMNEDHIICNSERSMENLRDNTITLVDSMDIDMSCGVQNEPKNLI 300

Query: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360
           EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP
Sbjct: 301 EMDSEGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTP 360

Query: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420
           ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL
Sbjct: 361 ANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNL 420

Query: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480
           SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI
Sbjct: 421 SFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTI 480

Query: 481 LKNGEHSNAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSE---------------- 540
           LKNGEHSNAPEISGSITTNR EQTMTCVDRVSESSVLEQLSTSE                
Sbjct: 481 LKNGEHSNAPEISGSITTNRSEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISVAPGT 540

Query: 541 ----------------PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLV 600
                           PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNA+R  
Sbjct: 541 PQTSGRLEQISIAPGTPQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAIRFC 600

Query: 601 NFLKLYSKRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660
              ++ S   S    RT     MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS
Sbjct: 601 EADEIESDGWS---GRTR----MVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSS 660

Query: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 666
           VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD
Sbjct: 661 VFYEILVLKTKDCVDVKQDHAYGDILVWKLPNWGTAFGTGLSIAHDD 700

[Close]

BLAST of MS003471 vs. ExPASy TrEMBL
Match: A0A5A7UND2 (Sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001110 PE=3 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 8.3e-232
Identity = 462/681 (67.84%), Postives = 529/681 (77.68%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLY DCN VLTEINEFVV TK  TRK T  TPYYAIT+P+RFE
Sbjct: 23  MAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFE 82

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDNF------ISLLQNHRKEIIALHSICFSDDT-- 120
           LD FDLGI+ED+TGS+ +      + DN       +SL QNH +EI ALHS+C SD T  
Sbjct: 83  LDEFDLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIF 142

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLK+IEMQAST H+HIMPE  Q+ST S  +YEV VST I+SA +KAI+ FDEDH
Sbjct: 143 EDVFSPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDH 202

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM Q+E+VVPE+STEM L + FSYEE V VK +SI E E SE+VK S ED
Sbjct: 203 RSDEEETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSRED 262

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
             SEG+ RE  +S+NE EF+N  + I  SERS+E LRDNT+TL+DSMDIDMS G Q EP 
Sbjct: 263 CHSEGMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPM 322

Query: 301 NLIEMDS-EGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTT 360
            LI   S EG +L+  EM+SPEM+D D  RN+ QLSIS+DG+ D +FPDF G KTPEFTT
Sbjct: 323 KLIGTGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTT 382

Query: 361 ISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQ 420
           ISTPANKERPR +RKRKCIVDD IVL NE LK+SIYDA DLVSKRRKCP SALTAWKASQ
Sbjct: 383 ISTPANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQ 442

Query: 421 ISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDS 480
           IS LSFGFS+PLMSCVS +LRSL  ET VNIS+S E++KSPENLD PSSP  H LVK+DS
Sbjct: 443 ISRLSFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDS 502

Query: 481 PVTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQI 540
           PVTI K GEHSN PEISGSI T R EQ  TCVDR  VSE+SVLE LSTSEPQ S  LEQI
Sbjct: 503 PVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQI 562

Query: 541 SIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAE 600
           +IAPGTPVRC TSAR F SP+SPKV NSNA++     +L +   S    RT     MVAE
Sbjct: 563 AIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWS---GRTR----MVAE 622

Query: 601 YLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDIL 660
           YLLQNFT++R++S E+ VNLSHLL  KTRKES+ +FYEILVLKTKDCVDVKQD AYGDIL
Sbjct: 623 YLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDIL 682

Query: 661 VWKLPNWGTAFGTGLSIAHDD 666
           VWKL NW TAFG+GLSI  +D
Sbjct: 683 VWKLSNWSTAFGSGLSIMCED 693

[Close]

BLAST of MS003471 vs. ExPASy TrEMBL
Match: A0A1S3B3X4 (sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485500 PE=3 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 8.3e-232
Identity = 462/681 (67.84%), Postives = 529/681 (77.68%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLY DCN VLTEINEFVV TK  TRK T  TPYYAIT+P+RFE
Sbjct: 57  MAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFE 116

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDNF------ISLLQNHRKEIIALHSICFSDDT-- 120
           LD FDLGI+ED+TGS+ +      + DN       +SL QNH +EI ALHS+C SD T  
Sbjct: 117 LDEFDLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIF 176

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLK+IEMQAST H+HIMPE  Q+ST S  +YEV VST I+SA +KAI+ FDEDH
Sbjct: 177 EDVFSPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDH 236

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM Q+E+VVPE+STEM L + FSYEE V VK +SI E E SE+VK S ED
Sbjct: 237 RSDEEETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSRED 296

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
             SEG+ RE  +S+NE EF+N  + I  SERS+E LRDNT+TL+DSMDIDMS G Q EP 
Sbjct: 297 CHSEGMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPM 356

Query: 301 NLIEMDS-EGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTT 360
            LI   S EG +L+  EM+SPEM+D D  RN+ QLSIS+DG+ D +FPDF G KTPEFTT
Sbjct: 357 KLIGTGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTT 416

Query: 361 ISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQ 420
           ISTPANKERPR +RKRKCIVDD IVL NE LK+SIYDA DLVSKRRKCP SALTAWKASQ
Sbjct: 417 ISTPANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQ 476

Query: 421 ISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDS 480
           IS LSFGFS+PLMSCVS +LRSL  ET VNIS+S E++KSPENLD PSSP  H LVK+DS
Sbjct: 477 ISRLSFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDS 536

Query: 481 PVTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQI 540
           PVTI K GEHSN PEISGSI T R EQ  TCVDR  VSE+SVLE LSTSEPQ S  LEQI
Sbjct: 537 PVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQI 596

Query: 541 SIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAE 600
           +IAPGTPVRC TSAR F SP+SPKV NSNA++     +L +   S    RT     MVAE
Sbjct: 597 AIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWS---GRTR----MVAE 656

Query: 601 YLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDIL 660
           YLLQNFT++R++S E+ VNLSHLL  KTRKES+ +FYEILVLKTKDCVDVKQD AYGDIL
Sbjct: 657 YLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDIL 716

Query: 661 VWKLPNWGTAFGTGLSIAHDD 666
           VWKL NW TAFG+GLSI  +D
Sbjct: 717 VWKLSNWSTAFGSGLSIMCED 727

[Close]

BLAST of MS003471 vs. ExPASy TrEMBL
Match: A0A1S3B388 (sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485500 PE=3 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 4.1e-231
Identity = 461/681 (67.69%), Postives = 527/681 (77.39%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFE 60
           MAYL+LG+ARIYSKKVEYLY DCN VLTEINEFVV TK  TRK T  TPYYAIT+P+RFE
Sbjct: 57  MAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFE 116

Query: 61  LDAFDLGILEDVTGSNFIR----LIVDNF------ISLLQNHRKEIIALHSICFSDDT-- 120
           LD FDLGI+ED+TGS+ +      + DN       +SL QNH +EI ALHS+C SD T  
Sbjct: 117 LDEFDLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIF 176

Query: 121 -DVFSLHLKDIEMQASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDH 180
            DVFS HLK+IEMQAST H+HIMPE  Q+ST S  +YEV VST I+SA +KAI+ FDEDH
Sbjct: 177 EDVFSPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDH 236

Query: 181 QSDEGDLLKEKMQQYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDED 240
           +SDE +  KEKM Q+E+VVPE+STEM L + FSYEE V VK +SI E E SE+VK S ED
Sbjct: 237 RSDEEETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSRED 296

Query: 241 HLSEGIYREHDRSENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPK 300
             SEG+ RE  +S+NE EF+N  + I  SERS+E LRDNT+TL+DSMDIDMS G Q EP 
Sbjct: 297 CHSEGMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPM 356

Query: 301 NLIEMDS-EGHDLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTT 360
            LI   S EG +L+  EM+SPEM+D D  RN+ QLSIS+DG+ D +FPDF G KTPEFTT
Sbjct: 357 KLIGTGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTT 416

Query: 361 ISTPANKERPRATRKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQ 420
           ISTPANKERPR +RKRKCIVDD IVL NE LK+SIYDA DLVSKRRKCP SALTAWKASQ
Sbjct: 417 ISTPANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQ 476

Query: 421 ISNLSFGFSVPLMSCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDS 480
           IS LSFGFS+PLMSCVS +LRSL  ET VNIS+S E++KSPENLD PSSP  H LVK+DS
Sbjct: 477 ISRLSFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDS 536

Query: 481 PVTILKNGEHSNAPEISGSITTNRLEQTMTCVDR--VSESSVLEQLSTSEPQTSGRLEQI 540
           PVTI K GEHSN PEISGSI T R EQ  TCVDR  VSE+SVLE LSTSEPQ S  LEQI
Sbjct: 537 PVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQI 596

Query: 541 SIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYSKRISCQLPRTLSSFIMVAE 600
           +IAPGTPVRC TSAR F SP+SPKV NSNA   + F ++          RT     MVAE
Sbjct: 597 AIAPGTPVRCSTSARLFRSPDSPKVSNSNA--QIKFCEVDELETDGWSGRTR----MVAE 656

Query: 601 YLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYGDIL 660
           YLLQNFT++R++S E+ VNLSHLL  KTRKES+ +FYEILVLKTKDCVDVKQD AYGDIL
Sbjct: 657 YLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDIL 716

Query: 661 VWKLPNWGTAFGTGLSIAHDD 666
           VWKL NW TAFG+GLSI  +D
Sbjct: 717 VWKLSNWSTAFGSGLSIMCED 728

[Close]

BLAST of MS003471 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 162.9 bits (411), Expect = 8.7e-40
Identity = 203/758 (26.78%), Postives = 321/758 (42.35%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKET-----LRTPYYAITI 60
           +AYL+LG+ RIYSKKV++L+ DCN  L  + EFV   KE  R++T          ++I +
Sbjct: 57  LAYLLLGVVRIYSKKVDFLFDDCNKALIGVKEFV--AKERNREKTGVSLPASIECFSIAL 116

Query: 61  PKRFELDAFDLGILEDVTGSNFIRLIVDNFI--SLLQNHRKEIIALHSICFSDDT----- 120
           P+RFELDAFDLG+LED  G N ++   D  +     +  R ++ ++      +D      
Sbjct: 117 PERFELDAFDLGVLEDFHGGN-VKPHEDITLKDGSQETERMDMYSMERFDMEEDLLFTFH 176

Query: 121 DVFSLHLKDIEMQASTSHYHIMPENSQVSTFS---RVKYEVGVSTGIDSAHLKAIKLFDE 180
           + FS +  + + ++      +  EN + +T     RV     + +   S   +      E
Sbjct: 177 ETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASRHRE 236

Query: 181 DHQSDEGDLLKE-------KMQQYEDVV--------------PESSTEMFLADGF--SYE 240
           D +SD  D+L E       ++ Q ED V               ESS +    DG   + E
Sbjct: 237 DPESD--DILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENLE 296

Query: 241 ENVIVKAISIIEEEHSEHVKSSDEDHLSEGIYREHDRSENELEFMNEDHI---------- 300
                K  S  E +H   + S  E  + E I+   D+         E  I          
Sbjct: 297 SEKTSKKTSCEEMQHDRSLPS--ECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPE 356

Query: 301 ---ICNS---ERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDLEILEMKS 360
              +  S   +  +E  RD+     +  D ++  G   E     E++  G +   L   +
Sbjct: 357 PVSVTGSRDLQEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMT 416

Query: 361 PEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRATRKRKCIV 420
              +D     N     ++V   +  +     G  +P+F+ I TPA KE  R +RKRKC++
Sbjct: 417 VS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLI 476

Query: 421 DDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLMSCVSSDL 480
           DD +++ N+ +K+ I D+S L++KRR  PH+     +  + +N    F  PL+   SSDL
Sbjct: 477 DDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSSDL 536

Query: 481 RSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTILKNGEHSNAPEI---- 540
           +SL  +  + +   A    +P++           L  + SP  IL + +  N  EI    
Sbjct: 537 QSLFCQP-IKLKNWA-TTGTPKDTKIARHKEKSSLDTVRSPGVILSSDQTENTQEIMETP 596

Query: 541 -----------------------SGSITTNRLEQTMTCVDRVSESSVL---EQLSTSE-- 600
                                  + S T+    QT    +   + SV+     + TSE  
Sbjct: 597 QAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSEQT 656

Query: 601 ---PQTSGRLEQISIAPGTPVRCPTSARSFGSP-----------------ESPKV----P 649
              P+T    EQ+ IAP TPVR   S R F  P                 E P V     
Sbjct: 657 VIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYVEN 716

[Close]

BLAST of MS003471 vs. TAIR 10
Match: AT5G40840.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-39
Identity = 201/759 (26.48%), Postives = 322/759 (42.42%), Query Frame = 0


Query: 1   MAYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKET-----LRTPYYAITI 60
           +AYL+LG+ RIYSKKV++L+ DCN  L  + EFV   KE  R++T          ++I +
Sbjct: 57  LAYLLLGVVRIYSKKVDFLFDDCNKALIGVKEFV--AKERNREKTGVSLPASIECFSIAL 116

Query: 61  PKRFELDAFDLGILEDVTGSNFIRLIVDNFI--SLLQNHRKEIIALHSICFSDDT----- 120
           P+RFELDAFDLG+LED  G N ++   D  +     +  R ++ ++      +D      
Sbjct: 117 PERFELDAFDLGVLEDFHGGN-VKPHEDITLKDGSQETERMDMYSMERFDMEEDLLFTFH 176

Query: 121 DVFSLHLKDIEMQASTSHYHIMPENSQVSTFS---RVKYEVGVSTGIDSAHLKAIKLFDE 180
           + FS +  + + ++      +  EN + +T     RV     + +   S   +      E
Sbjct: 177 ETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASRHRE 236

Query: 181 DHQSDEGDLLKE-------KMQQYEDVV--------------PESSTEMFLADGF--SYE 240
           D +SD  D+L E       ++ Q ED V               ESS +    DG   + E
Sbjct: 237 DPESD--DILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENLE 296

Query: 241 ENVIVKAISIIEEEHSEHVKSSDEDHLSEGIYREHDRSENELEFMNEDHI---------- 300
                K  S  E +H   + S  E  + E I+   D+         E  I          
Sbjct: 297 SEKTSKKTSCEEMQHDRSLPS--ECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPE 356

Query: 301 ---ICNS---ERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDLEILEMKS 360
              +  S   +  +E  RD+     +  D ++  G   E     E++  G +   L   +
Sbjct: 357 PVSVTGSRDLQEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMT 416

Query: 361 PEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRATRKRKCIV 420
              +D     N     ++V   +  +     G  +P+F+ I TPA KE  R +RKRKC++
Sbjct: 417 VS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLI 476

Query: 421 DDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLMSCVSSDL 480
           DD +++ N+ +K+ I D+S L++KRR  PH+     +  + +N    F  PL+   SSDL
Sbjct: 477 DDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSSDL 536

Query: 481 RSLLSETRVNISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTILKNGEHSNAPEI---- 540
           +SL  +  + +   A    +P++           L  + SP  IL + +  N  EI    
Sbjct: 537 QSLFCQP-IKLKNWA-TTGTPKDTKIARHKEKSSLDTVRSPGVILSSDQTENTQEIMETP 596

Query: 541 -----------------------SGSITTNRLEQTMTCVDRVSESSVL---EQLSTSE-- 600
                                  + S T+    QT    +   + SV+     + TSE  
Sbjct: 597 QAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSEQT 656

Query: 601 ---PQTSGRLEQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYS------ 649
              P+T    EQ+ IAP TPVR   S R F  P +    +  A    +F +  S      
Sbjct: 657 VIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYVEN 716

[Close]

BLAST of MS003471 vs. TAIR 10
Match: AT5G40840.3 (Rad21/Rec8-like family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-26
Identity = 120/449 (26.73%), Postives = 194/449 (43.21%), Query Frame = 0


Query: 257 ERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDLEILEMKSPEMEDHDDVR 316
           +  +E  RD+     +  D ++  G   E     E++  G +   L   +   +D     
Sbjct: 228 QEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMTVS-KDPSSEF 287

Query: 317 NNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRATRKRKCIVDDNIVLSNET 376
           N     ++V   +  +     G  +P+F+ I TPA KE  R +RKRKC++DD +++ N+ 
Sbjct: 288 NATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKV 347

Query: 377 LKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLMSCVSSDLRSLLSETRVN 436
           +K+ I D+S L++KRR  PH+     +  + +N    F  PL+   SSDL+SL  +  + 
Sbjct: 348 MKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSSDLQSLFCQP-IK 407

Query: 437 ISQSAEMLKSPENLDAPSSPVLHMLVKIDSPVTILKNGEHSNAPEI-------------- 496
           +   A    +P++           L  + SP  IL + +  N  EI              
Sbjct: 408 LKNWA-TTGTPKDTKIARHKEKSSLDTVRSPGVILSSDQTENTQEIMETPQAAALAGLKV 467

Query: 497 -------------SGSITTNRLEQTMTCVDRVSESSVL---EQLSTSE-----PQTSGRL 556
                        + S T+    QT    +   + SV+     + TSE     P+T    
Sbjct: 468 TAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSEQTVIAPETPVVS 527

Query: 557 EQISIAPGTPVRCPTSARSFGSPESPKVPNSNAVRLVNFLKLYS---------------- 616
           EQ+ IAP TPVR   S R F  P +    +  A    +F +  S                
Sbjct: 528 EQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYVENRDLDTILMND 587

Query: 617 ------KRISCQLPRTLSSFIMVAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSV 649
                 +R   Q     S    VA++L + F  +R    E+ V+L  L R +T+KES+ +
Sbjct: 588 EQVNADERQDLQQETWSSRTRNVAKFLEKTFLEQREREEEEKVSLLQLCRGRTQKESARL 647

[Close]

BLAST of MS003471 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-12
Identity = 158/700 (22.57%), Postives = 276/700 (39.43%), Query Frame = 0


Query: 2   AYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFEL 61
           ++L++G+ RIYSKKV+YLY D N + T + +  V+T+ +  ++  + P  ++T+P+   L
Sbjct: 57  SHLLVGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNL 116

Query: 62  DAFDL-GILEDVTGSNFIRLIVDNFISLLQNHRKEIIALHSICFSDDTDVFSLHLKDIEM 121
           D FDL     D+   N  R   D  I+L       I    ++ F +D    S+ + D++ 
Sbjct: 117 DEFDLEDDTLDMEFDNHTRSEED--ITLTDQIPTGIDPYVAVTFDEDIISESIPM-DVDQ 176

Query: 122 QASTSHYHIMPENSQVSTFSRVKYEVGVSTGIDSAHLKAIKLFDEDHQSDEGDLLKEKMQ 181
                  H             +  E    TG D+    +   FD    S           
Sbjct: 177 STEPVSRHT----------GEIDVETAHETGPDNEPRDSNIAFDTGTYS----------- 236

Query: 182 QYEDVVPESSTEMFLADGFSYEENVIVKAISIIEEEHSEHVKSSDE-DHLSEGIYREHDR 241
                 P + TE F       + N+  + I   E   +    +  E + + +  +     
Sbjct: 237 ------PRNVTEEFTEVQDPRQSNLTEERIPNSERNDATSPGTVPEIERMRDAAHDLSPT 296

Query: 242 SENELEFMNEDHIICNSERSMENLRDNTVTLVDSMDIDMSCGVQNEPKNLIEMDSEGHDL 301
           S        +D  +  +E   E L +   T + S+D +M             ++S  H  
Sbjct: 297 SHPSFAAQQQDVRVERTESLDETLNEKEPT-IPSIDEEM-------------LNSGRHSA 356

Query: 302 EILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKERPRAT 361
             L   SP                S  G S+ +  DF    +P+     +P  + + RA 
Sbjct: 357 FELRSGSPG---------------SAAG-SEEERADFVH-PSPQLVLQPSPPPQPQRRA- 416

Query: 362 RKRKCIVDDNIVLSNETLKQSIYDASDLVSKRRKCPHSALTAWKASQISNLSFGFSVPLM 421
           RKRK   D   VL+N+ + + + D SD + KR+K P S L  W+ +  S     F+ PL 
Sbjct: 417 RKRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNNQSRKDQNFNEPLF 476

Query: 422 SCVSSDLRSLLSETRVNISQSAEMLKSPENLDAPS--SPVLHMLVKIDSPVTILKNGEHS 481
           +  S DLR++  +  V  +    +  S E L  P+  SP     V+I +PV+ + +  + 
Sbjct: 477 TGFSDDLRNVFEKDYV--ASKPHLAVSDETLPEPASVSPTREAEVEI-NPVSPIPDSTNP 536

Query: 482 NAPEISGSITTNRLEQTMTCVDRVSESSVLEQLSTSEPQTSGRLEQISIA------PGTP 541
           ++     ++  +  +QT   +D         +   +E Q+    +   +        G P
Sbjct: 537 DS-----TVQLSPAQQTEDVLDSAGPRPAHAESVATEAQSPRTFDNDDMGIEHLRDGGFP 596

Query: 542 VRCPT--------------------SARSFGS-PESPKVPNSNAVRLVNFLKLYSKRISC 601
           V  P+                       S+ + P +  VP     +    L   S+R   
Sbjct: 597 VYMPSPPPRSSPFRTDDFTTQSGNWETESYRTEPSTSTVPEDLPGQRNLGLSPVSERTDE 656

Query: 602 QL-------------PRTLSSFIM------VAEYLLQNFTSRRVESVEKV--VNLSHLLR 650
           +L             P +  S  +      +A+YL Q  +S    S      ++LS +L 
Sbjct: 657 ELYFLEVGGNSPVGTPASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILA 685

[Close]

BLAST of MS003471 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-05
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 582  VAEYLLQNFTSRRVESVEKVVNLSHLLREKTRKESSSVFYEILVLKTKDCVDVKQDHAYG 641
            VA+Y LQ    +  E+ + V+    LL  KTRKE+S +F+E LVLKT+D + V+Q   Y 
Sbjct: 958  VAKY-LQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQGKPYE 1017

Query: 642  DILVWKLP 650
             I++   P
Sbjct: 1018 SIIIKPRP 1024

HSP 2 Score: 46.6 bits (109), Expect = 9.1e-05
Identity = 85/360 (23.61%), Postives = 145/360 (40.28%), Query Frame = 0


Query: 2   AYLVLGLARIYSKKVEYLYIDCNGVLTEINEFVVNTKEDTRKETLRTPYYAITIPKRFEL 61
           ++L+LG+ RIYS+KV YL+ DC+  L ++ +   +   D   E    PY++IT+P+ F+L
Sbjct: 57  SHLLLGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDL 116

Query: 62  DAFDLGILEDVTGSNFIRLIVDNFISLLQNHRKEIIALHSICFSDDTDVFSLHLKDIEMQ 121
           D F+L   E   G+      VD+ +S      KE I L               L +    
Sbjct: 117 DDFELPDNEIFQGN-----YVDHHVS-----TKEQITLQDTMDGVVYSTSQFGLDERFGD 176

Query: 122 ASTSHYHIMPENSQVSTFSRVKYEVGVSTGID-SAHLKAIKLFDEDHQSDEGDLLKEKMQ 181
             TS   +  + +       +  +     GID +A+L A     +D      + +     
Sbjct: 177 GDTSQAALDLDEAVFQDKDVIGSDDEGVPGIDHNAYLDAAAPGIKDSMEGVSEAMPMDFN 236

Query: 182 QYEDVVPESSTEMFLADGFSYEENVIVK---AISIIEEEHSEHVKSSDEDHLSEGIYREH 241
           + E V   +    F+ D  + +   +V+   + S+ E+   +     ++ +  EGI    
Sbjct: 237 E-EQVEDLAMNNEFIEDAQAPQTPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSG 296

Query: 242 DRSENELEFMNEDHIICNSERSMENLRDNTVT--LVDSMDIDMSCGVQNEPKNLIEMDSE 301
           + + NE+    ED        S  N  ++ VT   VD   ID +   QNEP+   E    
Sbjct: 297 ELNANEMPKRGED------LSSEYNAPESAVTPVEVDKSQIDENVNTQNEPEE--ERAEH 356

Query: 302 GH-DLEILEMKSPEMEDHDDVRNNLQLSISVDGISDPKFPDFAGIKTPEFTTISTPANKE 355
            H         + EMED   V N    ++  D        +  G +  +   I+T  N+E
Sbjct: 357 VHVTSPCCSHITTEMEDPGQVMNEAGANVVPDKPDAVPPLETPGEENRDHFAIATEVNQE 397

The following BLAST results are available for this feature:

BLAST of MS003471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134001.1	0.0e+00	89.11	sister chromatid cohesion 1 protein 2 isoform X1 [Momordica charantia] >XP_02213...	[more]
XP_022134003.1	0.0e+00	89.11	sister chromatid cohesion 1 protein 2 isoform X3 [Momordica charantia]	[more]
XP_038884214.1	5.9e-232	68.24	LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 2 [Benincasa hispida]	[more]
XP_008441366.1	1.7e-231	67.84	PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo]	[more]
KAA0056598.1	1.7e-231	67.84	sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of MS003471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ20	1.6e-38	26.48	Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana OX=3702 GN=SYN2 PE...	[more]
Q9FQ19	1.1e-10	22.57	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	2.0e-04	41.18	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]

BLAST of MS003471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYC1	0.0e+00	89.11	sister chromatid cohesion 1 protein 2 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1C0U1	0.0e+00	89.11	sister chromatid cohesion 1 protein 2 isoform X3 OS=Momordica charantia OX=3673 ...	[more]
A0A5A7UND2	8.3e-232	67.84	Sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3B3X4	8.3e-232	67.84	sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3B388	4.1e-231	67.69	sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of MS003471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40840.1	8.7e-40	26.78	Rad21/Rec8-like family protein	[more]
AT5G40840.2	1.1e-39	26.48	Rad21/Rec8-like family protein	[more]
AT5G40840.3	1.1e-26	26.73	Rad21/Rec8-like family protein	[more]
AT3G59550.1	7.7e-12	22.57	Rad21/Rec8-like family protein	[more]
AT5G16270.1	1.4e-05	41.18	sister chromatid cohesion 1 protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 601..645 e-value: 2.5E-16 score: 58.7
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 577..655 e-value: 5.6E-15 score: 56.9
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 3..39 e-value: 1.1E-5 score: 25.6
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..657
None	No IPR available	PANTHER	PTHR12585:SF49	SISTER CHROMATID COHESION 1 PROTEIN 2	coord: 1..657
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 583..649

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003471.1	MS003471.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0008278	cohesin complex
molecular_function	GO:0005515	protein binding