MS002483 (gene) Bitter gourd (TR) v1

Overview
NameMS002483
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Locationscaffold318: 488657 .. 489097 (+)
RNA-Seq ExpressionMS002483
SyntenyMS002483
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTCTCAAAGAGCCATTAGGGTTCATGATTGTGGTGGCTTTGGTCCTTCTTCATTGCTCCACCTTAGTTTCGTCGGCGTGGCCGAGTTGGCCAACATGGCATGTTAATATCGCCAACGAGCTGAATAGCGAACAAACGCTATTCGTGCACTGTCAATCGAAGGATGATGATTTGGGAGAGCACAATATCAGTGTTGGAACTCAATACAGTTTTGCTTTTAAAGACAATATCTGGGGCACTACACTTTTCTGGTGTTACATGCGCAAGCCAAACAATGCTCATGCTGATTTTGATGTGTATTGGGTTGACAACAGTAAAGGTTATTGGCTTTATACCAGATGCAATTGGAAAACTTGTATTTGGATTGCCAAAGACGATGGAATTTACATAAAAGATATTCCTGTGAATCAAGATCAGCTTATTCATAAGTGGGAG

mRNA sequence

ATGGGGTGTCTCAAAGAGCCATTAGGGTTCATGATTGTGGTGGCTTTGGTCCTTCTTCATTGCTCCACCTTAGTTTCGTCGGCGTGGCCGAGTTGGCCAACATGGCATGTTAATATCGCCAACGAGCTGAATAGCGAACAAACGCTATTCGTGCACTGTCAATCGAAGGATGATGATTTGGGAGAGCACAATATCAGTGTTGGAACTCAATACAGTTTTGCTTTTAAAGACAATATCTGGGGCACTACACTTTTCTGGTGTTACATGCGCAAGCCAAACAATGCTCATGCTGATTTTGATGTGTATTGGGTTGACAACAGTAAAGGTTATTGGCTTTATACCAGATGCAATTGGAAAACTTGTATTTGGATTGCCAAAGACGATGGAATTTACATAAAAGATATTCCTGTGAATCAAGATCAGCTTATTCATAAGTGGGAG

Coding sequence (CDS)

ATGGGGTGTCTCAAAGAGCCATTAGGGTTCATGATTGTGGTGGCTTTGGTCCTTCTTCATTGCTCCACCTTAGTTTCGTCGGCGTGGCCGAGTTGGCCAACATGGCATGTTAATATCGCCAACGAGCTGAATAGCGAACAAACGCTATTCGTGCACTGTCAATCGAAGGATGATGATTTGGGAGAGCACAATATCAGTGTTGGAACTCAATACAGTTTTGCTTTTAAAGACAATATCTGGGGCACTACACTTTTCTGGTGTTACATGCGCAAGCCAAACAATGCTCATGCTGATTTTGATGTGTATTGGGTTGACAACAGTAAAGGTTATTGGCTTTATACCAGATGCAATTGGAAAACTTGTATTTGGATTGCCAAAGACGATGGAATTTACATAAAAGATATTCCTGTGAATCAAGATCAGCTTATTCATAAGTGGGAG

Protein sequence

MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
Homology
BLAST of MS002483 vs. NCBI nr
Match: XP_022143694.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 325.9 bits (834), Expect = 1.8e-85
Identity = 142/147 (96.60%), Postives = 144/147 (97.96%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MGCLKEPLGFMIVVALVLLHCSTL SSAWPSWPTWHVNI NELNSEQTLFVHCQSKDDDL
Sbjct: 1   MGCLKEPLGFMIVVALVLLHCSTLASSAWPSWPTWHVNIVNELNSEQTLFVHCQSKDDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           GEHNISVGTQYSFAFKDNIWGTTLFWCY+RKPNN+HADFDVYWVDN KGYWLYTRCNWKT
Sbjct: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNNSHADFDVYWVDNGKGYWLYTRCNWKT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           CIWIAKDDGIYIKDIPVNQDQLIHKWE
Sbjct: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 147

BLAST of MS002483 vs. NCBI nr
Match: XP_022152463.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 238.8 bits (608), Expect = 3.0e-59
Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG +K+PLGF+IVVALVLL CST+  + WP  PTW V+I NEL++ Q LFVHC+SKDDDL
Sbjct: 1   MGGIKKPLGFVIVVALVLLGCSTVALATWP-MPTWTVDIVNELSNGQELFVHCKSKDDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           GEHN+  G QY F FKDN+W TTLFWCY+RKP+N+HA FDVYW D SKG+WLYTRC++K 
Sbjct: 61  GEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKN 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           CIWIAK DGIYIK+IP NQD+L+H WE
Sbjct: 121 CIWIAKADGIYIKNIPSNQDELVHPWE 146

BLAST of MS002483 vs. NCBI nr
Match: XP_022143641.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 8.3e-46
Identity = 85/141 (60.28%), Postives = 109/141 (77.30%), Query Frame = 0

Query: 7   PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNI 66
           P   +I+VA+VL+  ST  + S WP+   W V+I N L+S QTLF+HC+SKDDDLG HN+
Sbjct: 4   PKKLLILVAMVLVCSSTTTAHSTWPN--KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNL 63

Query: 67  SVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIA 126
           +VG ++ + F+DN+WGTTLFWCYMRKP+NA+A F+VYW D SK  WLY  CNW+ CIW A
Sbjct: 64  AVGAKFGWNFRDNLWGTTLFWCYMRKPDNANASFEVYWDDKSKEQWLYNFCNWEDCIWTA 123

Query: 127 KDDGIYIKDIPVNQDQLIHKW 147
           KDDGIYIK+I  N+D+L HKW
Sbjct: 124 KDDGIYIKNILGNKDELAHKW 142

BLAST of MS002483 vs. NCBI nr
Match: KAG6592857.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 84/147 (57.14%), Postives = 101/147 (68.71%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG L+ PL  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DD+
Sbjct: 1   MGDLRMPLRNMIVATLALVAFSTVAMGSWP-LETWTVQVVNGLGGGQTLLAHCKSKNDDM 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           G+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FDVYW D SK  WLYTRC   T
Sbjct: 61  GDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           C+WI KDDG+YIK+   NQD+L+H WE
Sbjct: 121 CVWIGKDDGVYIKNASTNQDELVHPWE 146

BLAST of MS002483 vs. NCBI nr
Match: XP_023514776.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-45
Identity = 84/147 (57.14%), Postives = 100/147 (68.03%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG  + PL  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DDL
Sbjct: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWP-METWTVQVVNGLGGGQTLLAHCKSKNDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           G+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FDVYW D SK  WLYTRC   T
Sbjct: 61  GDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           C+WI KDDG+YIK+   NQD+L+H WE
Sbjct: 121 CVWIGKDDGVYIKNASTNQDELVHPWE 146

BLAST of MS002483 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 0

Query: 1   MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQ 60
           M C+K+  L     +AL     VL+  +T      P    W V + N L + +TLF+HC+
Sbjct: 1   MNCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCK 60

Query: 61  SKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYT 120
           SK+DDLGE N+    ++S+ F +N+  +T FWCYM K +N H + +V+W D      L+ 
Sbjct: 61  SKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DNGHMNVNVFWDD----VILFH 120

Query: 121 RCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           RC WK CIW AK DG+Y+ +    +D L  KWE
Sbjct: 121 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

BLAST of MS002483 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-25
Identity = 51/131 (38.93%), Postives = 81/131 (61.83%), Query Frame = 0

Query: 17  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFK 76
           VL   +T      P    W V +AN L + +TLF+HC+SK++DLG+ N+    ++S+ F 
Sbjct: 23  VLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFG 82

Query: 77  DNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP 136
           +N+  +TLFWCYM K ++ H +  V+W D      L+ RC+WK C+W AK+DG+Y+ +  
Sbjct: 83  ENMLHSTLFWCYMSK-DDGHMNVKVFWDD----VILFHRCDWKNCVWTAKNDGLYLWNSA 142

Query: 137 VNQDQLIHKWE 148
           + +D L  KW+
Sbjct: 143 IGEDVLSEKWK 148

BLAST of MS002483 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.7e-13
Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 0

Query: 37  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAH 96
           V I N+L ++ TL  HC+SKDDDLG   +  G  +SF+F    +G TL++C    PN +H
Sbjct: 50  VEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESH 109

Query: 97  ADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW 147
           + FD+Y      G     +C    C+W  + +G    +    Q  L + W
Sbjct: 110 S-FDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

BLAST of MS002483 vs. ExPASy Swiss-Prot
Match: P0DN94 (S-protein homolog 17 OS=Arabidopsis thaliana OX=3702 GN=SPH17 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0

Query: 37  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PNNA 96
           + IANEL  ++ L++ C SKDD LG H I +G  +   F  N WGTT F C +R+ PN  
Sbjct: 24  IRIANELKFKKNLWMRCYSKDDVLGPHIIPIGGHFLDYFGTNFWGTTRFMCTLRQGPNYI 83

Query: 97  H----ADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIK 134
           H      F ++ +++  G W           W A++DGIY+K
Sbjct: 84  HYQSFTAFKLFSMEDHGGLW----------DWRAREDGIYLK 115

BLAST of MS002483 vs. ExPASy Swiss-Prot
Match: Q9LVX2 (S-protein homolog 31 OS=Arabidopsis thaliana OX=3702 GN=SPH31 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.9e-11
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query: 37  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMR-KPNNA 96
           + I NEL S + L++ C SK+D +G   I VG  Y  +F+ NIWGTT F C ++ +PN  
Sbjct: 24  IRIVNELKSHKNLWMRCYSKNDVIGPKIIPVGYDYVNSFRANIWGTTRFMCTLKQRPNYR 83

Query: 97  H-ADFDVYWVDNSKGYWLYTR-CNWKTCIWIAKDDGIYIK 134
           H  +F  +     K Y  Y    +W    W A++DGIY+K
Sbjct: 84  HYQNFTAF-----KQYTAYDNGADWD---WRAREDGIYLK 115

BLAST of MS002483 vs. ExPASy TrEMBL
Match: A0A6J1CQ33 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 8.9e-86
Identity = 142/147 (96.60%), Postives = 144/147 (97.96%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MGCLKEPLGFMIVVALVLLHCSTL SSAWPSWPTWHVNI NELNSEQTLFVHCQSKDDDL
Sbjct: 1   MGCLKEPLGFMIVVALVLLHCSTLASSAWPSWPTWHVNIVNELNSEQTLFVHCQSKDDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           GEHNISVGTQYSFAFKDNIWGTTLFWCY+RKPNN+HADFDVYWVDN KGYWLYTRCNWKT
Sbjct: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNNSHADFDVYWVDNGKGYWLYTRCNWKT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           CIWIAKDDGIYIKDIPVNQDQLIHKWE
Sbjct: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 147

BLAST of MS002483 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG +K+PLGF+IVVALVLL CST+  + WP  PTW V+I NEL++ Q LFVHC+SKDDDL
Sbjct: 1   MGGIKKPLGFVIVVALVLLGCSTVALATWP-MPTWTVDIVNELSNGQELFVHCKSKDDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           GEHN+  G QY F FKDN+W TTLFWCY+RKP+N+HA FDVYW D SKG+WLYTRC++K 
Sbjct: 61  GEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKN 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           CIWIAK DGIYIK+IP NQD+L+H WE
Sbjct: 121 CIWIAKADGIYIKNIPSNQDELVHPWE 146

BLAST of MS002483 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46
Identity = 85/141 (60.28%), Postives = 109/141 (77.30%), Query Frame = 0

Query: 7   PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNI 66
           P   +I+VA+VL+  ST  + S WP+   W V+I N L+S QTLF+HC+SKDDDLG HN+
Sbjct: 4   PKKLLILVAMVLVCSSTTTAHSTWPN--KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNL 63

Query: 67  SVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIA 126
           +VG ++ + F+DN+WGTTLFWCYMRKP+NA+A F+VYW D SK  WLY  CNW+ CIW A
Sbjct: 64  AVGAKFGWNFRDNLWGTTLFWCYMRKPDNANASFEVYWDDKSKEQWLYNFCNWEDCIWTA 123

Query: 127 KDDGIYIKDIPVNQDQLIHKW 147
           KDDGIYIK+I  N+D+L HKW
Sbjct: 124 KDDGIYIKNILGNKDELAHKW 142

BLAST of MS002483 vs. ExPASy TrEMBL
Match: A0A6J1H5A3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 83/147 (56.46%), Postives = 100/147 (68.03%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG L+  L  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DD+
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWP-LETWTVQVVNGLGGGQTLLAHCKSKNDDM 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           G+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FDVYW D SK  WLYTRC   T
Sbjct: 61  GDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           C+WI KDDG+YIK+   NQD+L+H WE
Sbjct: 121 CVWIGKDDGVYIKNASTNQDELVHPWE 146

BLAST of MS002483 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.9e-45
Identity = 82/147 (55.78%), Postives = 100/147 (68.03%), Query Frame = 0

Query: 1   MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDL 60
           MG L+  L  MIV  L L+  ST+   +WP    W V + N L   QTL  HC+SK+DDL
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWP-LERWTVQVVNGLGGGQTLLAHCKSKNDDL 60

Query: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKT 120
           G+HN++ G  +SF FKDN+W TT FWC + KPNNAHA FDVYW D SK  WLYTRC   T
Sbjct: 61  GDHNLATGALFSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHT 120

Query: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           C+WI KDDG+YIK+   NQD+L+H WE
Sbjct: 121 CVWIGKDDGVYIKNASTNQDELVHPWE 146

BLAST of MS002483 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 117.5 bits (293), Expect = 9.2e-27
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 0

Query: 1   MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQ 60
           M C+K+  L     +AL     VL+  +T      P    W V + N L + +TLF+HC+
Sbjct: 1   MNCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCK 60

Query: 61  SKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYT 120
           SK+DDLGE N+    ++S+ F +N+  +T FWCYM K +N H + +V+W D      L+ 
Sbjct: 61  SKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DNGHMNVNVFWDD----VILFH 120

Query: 121 RCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE 148
           RC WK CIW AK DG+Y+ +    +D L  KWE
Sbjct: 121 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

BLAST of MS002483 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 114.8 bits (286), Expect = 6.0e-26
Identity = 51/131 (38.93%), Postives = 81/131 (61.83%), Query Frame = 0

Query: 17  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFK 76
           VL   +T      P    W V +AN L + +TLF+HC+SK++DLG+ N+    ++S+ F 
Sbjct: 23  VLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFG 82

Query: 77  DNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP 136
           +N+  +TLFWCYM K ++ H +  V+W D      L+ RC+WK C+W AK+DG+Y+ +  
Sbjct: 83  ENMLHSTLFWCYMSK-DDGHMNVKVFWDD----VILFHRCDWKNCVWTAKNDGLYLWNSA 142

Query: 137 VNQDQLIHKWE 148
           + +D L  KW+
Sbjct: 143 IGEDVLSEKWK 148

BLAST of MS002483 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-16
Identity = 51/124 (41.13%), Postives = 66/124 (53.23%), Query Frame = 0

Query: 10  FMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGT 69
           F IV+ L +      VS+A+       V ++N+L   + L VHC+SKDDDLGEH + +G 
Sbjct: 7   FSIVIGLCI-----GVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQ 66

Query: 70  QYSFAFKDNIWGTTLFWCYM-RKPN-NAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKD 129
            Y F F DNIW TT F C M + PN   H DF  Y    SK           +C WI ++
Sbjct: 67  DYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSWSKAL-------EASCKWIGRE 118

Query: 130 DGIY 132
           DGIY
Sbjct: 127 DGIY 118

BLAST of MS002483 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 44/115 (38.26%), Postives = 58/115 (50.43%), Query Frame = 0

Query: 39  IANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PN-NAH 98
           + NELN+ + L V C+SKDD+LG+H + VG      F DN+W  TLFWC + K P+   H
Sbjct: 26  VKNELNN-KVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 99  ADFDVYWVDNSKGYWLYTRCNWKTCI-----WIAKDDGIYIKDIPVNQDQLIHKW 147
             FD Y            R  WK  I     WIA++DGIY    P    +  + W
Sbjct: 86  VAFDAY------------RSQWKADIGPRYLWIAREDGIYYTQHPETPPKKKYDW 127

BLAST of MS002483 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 74.7 bits (182), Expect = 6.9e-14
Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 0

Query: 37  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAH 96
           V I N+L ++ TL  HC+SKDDDLG   +  G  +SF+F    +G TL++C    PN +H
Sbjct: 50  VEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESH 109

Query: 97  ADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW 147
           + FD+Y      G     +C    C+W  + +G    +    Q  L + W
Sbjct: 110 S-FDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143694.11.8e-8596.60S-protein homolog 1-like [Momordica charantia][more]
XP_022152463.13.0e-5970.07S-protein homolog 1-like [Momordica charantia][more]
XP_022143641.18.3e-4660.28S-protein homolog 1-like [Momordica charantia][more]
KAG6592857.11.4e-4557.14S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023514776.11.9e-4557.14S-protein homolog 1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
F4JLS01.3e-2539.22S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1[more]
Q2HQ468.4e-2538.93S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1[more]
F4JLQ59.7e-1333.64S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1[more]
P0DN941.4e-1137.25S-protein homolog 17 OS=Arabidopsis thaliana OX=3702 GN=SPH17 PE=3 SV=1[more]
Q9LVX26.9e-1139.00S-protein homolog 31 OS=Arabidopsis thaliana OX=3702 GN=SPH31 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CQ338.9e-8696.60S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1[more]
A0A6J1DEX41.4e-5970.07S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1[more]
A0A6J1CQW34.0e-4660.28S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1[more]
A0A6J1H5A35.8e-4556.46S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1[more]
A0A6J1L1999.9e-4555.78S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16295.19.2e-2739.22S-protein homologue 1 [more]
AT4G29035.16.0e-2638.93Plant self-incompatibility protein S1 family [more]
AT5G04350.12.5e-1641.13Plant self-incompatibility protein S1 family [more]
AT5G04347.11.4e-1438.26Plant self-incompatibility protein S1 family [more]
AT4G16195.16.9e-1433.64Plant self-incompatibility protein S1 family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 36..146
e-value: 1.2E-28
score: 99.7
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 29..132
NoneNo IPR availablePANTHERPTHR31232:SF34PUTATIVE-RELATEDcoord: 29..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS002483.1MS002483.1mRNA