MS002480 (gene) Bitter gourd (TR) v1

Overview


Name	MS002480
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold318: 477620 .. 477961 (+)
RNA-Seq Expression	MS002480
Synteny	MS002480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGCGTGTGGACATCGTCAATGGGTTGAGCAGCGGACAGACACTGTTCATACATTGTAAGTCCAAAGACGATGATTTGGGAATACACAACCTTGCGGTCGGAGCTAAGTTTGGTTGGAACTTCAGAGACAATCTTTGGGGAACAACATTGTTCTGGTGTTACATGCGCAAACCGAACAATGCTAATGCTTCTTTTGAAGTATATTGGGATGACAAGAGTAAAGAACAATGGCTATATAATTTTTGCAATTGGGAGGATTGCATTTGGACCGCCAAAGATGATGGAATTTATATAAAAAATATCCTTGGGAATAAGGACGAGCTAGCTCACAAATGGGGA

mRNA sequence

AAATGGCGTGTGGACATCGTCAATGGGTTGAGCAGCGGACAGACACTGTTCATACATTGTAAGTCCAAAGACGATGATTTGGGAATACACAACCTTGCGGTCGGAGCTAAGTTTGGTTGGAACTTCAGAGACAATCTTTGGGGAACAACATTGTTCTGGTGTTACATGCGCAAACCGAACAATGCTAATGCTTCTTTTGAAGTATATTGGGATGACAAGAGTAAAGAACAATGGCTATATAATTTTTGCAATTGGGAGGATTGCATTTGGACCGCCAAAGATGATGGAATTTATATAAAAAATATCCTTGGGAATAAGGACGAGCTAGCTCACAAATGGGGA

Coding sequence (CDS)

AAATGGCGTGTGGACATCGTCAATGGGTTGAGCAGCGGACAGACACTGTTCATACATTGTAAGTCCAAAGACGATGATTTGGGAATACACAACCTTGCGGTCGGAGCTAAGTTTGGTTGGAACTTCAGAGACAATCTTTGGGGAACAACATTGTTCTGGTGTTACATGCGCAAACCGAACAATGCTAATGCTTCTTTTGAAGTATATTGGGATGACAAGAGTAAAGAACAATGGCTATATAATTTTTGCAATTGGGAGGATTGCATTTGGACCGCCAAAGATGATGGAATTTATATAAAAAATATCCTTGGGAATAAGGACGAGCTAGCTCACAAATGGGGA

Protein sequence

KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG

Homology

[Close]

BLAST of MS002480 vs. NCBI nr
Match: XP_022143641.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKP+
Sbjct: 30  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPD 89

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 115
           NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG
Sbjct: 90  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 143

[Close]

BLAST of MS002480 vs. NCBI nr
Match: XP_022143694.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 73/112 (65.18%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W V+IVN L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCY+RKPNN
Sbjct: 35  WHVNIVNELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNN 94

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           ++A F+VYW D  K  WLY  CNW+ CIW AKDDGIYIK+I  N+D+L HKW
Sbjct: 95  SHADFDVYWVDNGKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW 146

[Close]

BLAST of MS002480 vs. NCBI nr
Match: XP_004292390.1 (PREDICTED: uncharacterized protein LOC101314627 [Fragaria vesca subsp. vesca])

HSP 1 Score: 181.0 bits (458), Expect = 5.7e-42
Identity = 76/114 (66.67%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           KW V +VNGLSS +TLF+HCKSKDDDLGIHNLAVG +  W+FR+N  GTTLFWCYMR   
Sbjct: 30  KWHVHVVNGLSSRRTLFVHCKSKDDDLGIHNLAVGTETNWSFRENFIGTTLFWCYMRTDR 89

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 115
              ASF+V+W++    +WL   CNW+DCIWTA+DDGIYIKNI  N DEL HKWG
Sbjct: 90  EEYASFDVFWEEHD-HKWLQTRCNWKDCIWTARDDGIYIKNIPNNSDELIHKWG 142

[Close]

BLAST of MS002480 vs. NCBI nr
Match: XP_022152463.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 74/112 (66.07%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKP+N
Sbjct: 34  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 93

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           ++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKNI  N+DEL H W
Sbjct: 94  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 145

[Close]

BLAST of MS002480 vs. NCBI nr
Match: XP_024200376.1 (S-protein homolog 74 [Rosa chinensis] >PRQ31789.1 putative plant self-incompatibility S1 [Rosa chinensis])

HSP 1 Score: 171.8 bits (434), Expect = 3.4e-39
Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W V IVNGLSSG+ LF+HCKSKD+DLGIHNLAVG +  W+F++N  GTTLFWCY+R    
Sbjct: 28  WHVHIVNGLSSGRILFVHCKSKDNDLGIHNLAVGTETTWSFKENFIGTTLFWCYLRTDRE 87

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 115
             A F+V+W + ++ +WL   CNW+DCIWTA+DDG+YIKNI  N DEL H+WG
Sbjct: 88  EYADFDVFWSEHNR-KWLQTRCNWKDCIWTARDDGVYIKNIPNNSDELIHQWG 139

[Close]

BLAST of MS002480 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30
Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           +W+V +VNGL++G+TLFIHCKSK+DDLG  NL    +F WNF +N+  +T FWCYM K +
Sbjct: 40  EWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-D 99

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           N + +  V+WDD      L++ C W++CIWTAK DG+Y+ N    +D L+ KW
Sbjct: 100 NGHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS002480 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           +W+V + NGL++G+TLFIHCKSK++DLG  NL    +F WNF +N+  +TLFWCYM K +
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-D 99

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           + + + +V+WDD      L++ C+W++C+WTAK+DG+Y+ N    +D L+ KW
Sbjct: 100 DGHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS002480 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-11
Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 3   RVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNA 62
           RV I N   +   L IHCKS+DDDLG H LA G  FGW F  N   +TL++C   +    
Sbjct: 47  RVTIQN--DNDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMK 106

Query: 63  NASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIY 99
              FE+Y  ++       +F    +C W A+ DGIY
Sbjct: 107 KGVFEIYRANR-------DFYRCANCTWKAEKDGIY 133

[Close]

BLAST of MS002480 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           K  V+I N L +  TL  HCKSKDDDLG   L  G  + ++F    +G TL++C    PN
Sbjct: 47  KRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPN 106

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
            ++ SF++Y D   ++    N C  + C+W  + +G    N    + +L + W
Sbjct: 107 ESH-SFDIYKD--HRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of MS002480 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 16  LFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSK 75
           L +HCKS+DDD G H L  G  +GW F  N   +TL++C   +       F++Y      
Sbjct: 44  LGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIY------ 103

Query: 76  EQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
            + + +     +C W AK+DGIY    +  K+ L +KW
Sbjct: 104 -KAVRDSSRCRNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS002480 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.5e-67
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKP+
Sbjct: 30  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPD 89

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 115
           NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG
Sbjct: 90  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 143

[Close]

BLAST of MS002480 vs. ExPASy TrEMBL
Match: A0A6J1CQ33 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.5e-43
Identity = 73/112 (65.18%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W V+IVN L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCY+RKPNN
Sbjct: 35  WHVNIVNELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNN 94

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           ++A F+VYW D  K  WLY  CNW+ CIW AKDDGIYIK+I  N+D+L HKW
Sbjct: 95  SHADFDVYWVDNGKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW 146

[Close]

BLAST of MS002480 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.0e-42
Identity = 74/112 (66.07%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKP+N
Sbjct: 34  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 93

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           ++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKNI  N+DEL H W
Sbjct: 94  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 145

[Close]

BLAST of MS002480 vs. ExPASy TrEMBL
Match: A0A2P6QC93 (S-protein homolog OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0039321 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 2   WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNN 61
           W V IVNGLSSG+ LF+HCKSKD+DLGIHNLAVG +  W+F++N  GTTLFWCY+R    
Sbjct: 28  WHVHIVNGLSSGRILFVHCKSKDNDLGIHNLAVGTETTWSFKENFIGTTLFWCYLRTDRE 87

Query: 62  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKWG 115
             A F+V+W + ++ +WL   CNW+DCIWTA+DDG+YIKNI  N DEL H+WG
Sbjct: 88  EYADFDVFWSEHNR-KWLQTRCNWKDCIWTARDDGVYIKNIPNNSDELIHQWG 139

[Close]

BLAST of MS002480 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39
Identity = 70/113 (61.95%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           +W V +VNGL  GQTL  HCKSK+DDLG HNLA GA F + F+DN+W TT FWC + KPN
Sbjct: 33  RWTVQVVNGLGGGQTLLAHCKSKNDDLGDHNLATGALFSFTFKDNVWQTTEFWCTLTKPN 92

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           NA+ASF+VYW D SK+QWLY  C    C+W  KDDG+YIKN   N+DEL H W
Sbjct: 93  NAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPW 145

[Close]

BLAST of MS002480 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 133.7 bits (335), Expect = 9.7e-32
Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           +W+V +VNGL++G+TLFIHCKSK+DDLG  NL    +F WNF +N+  +T FWCYM K +
Sbjct: 40  EWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-D 99

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           N + +  V+WDD      L++ C W++CIWTAK DG+Y+ N    +D L+ KW
Sbjct: 100 NGHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS002480 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 128.3 bits (321), Expect = 4.1e-30
Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           +W+V + NGL++G+TLFIHCKSK++DLG  NL    +F WNF +N+  +TLFWCYM K +
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-D 99

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
           + + + +V+WDD      L++ C+W++C+WTAK+DG+Y+ N    +D L+ KW
Sbjct: 100 DGHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS002480 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-12
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 1   KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPN 60
           K  V+I N L +  TL  HCKSKDDDLG   L  G  + ++F    +G TL++C    PN
Sbjct: 47  KRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPN 106

Query: 61  NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 114
            ++ SF++Y D   ++    N C  + C+W  + +G    N    + +L + W
Sbjct: 107 ESH-SFDIYKD--HRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of MS002480 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-12
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 2   WRVDIV--NGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKP 61
           WR  +V    L  G  L IHCKSK DDLGIH +    ++ + F+ NLW +TLF+C  +  
Sbjct: 26  WRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWD 85

Query: 62  NNANASFEVYWDDKSKEQWLYNFCNWE 87
           +    SF++Y  D  ++Q + + C WE
Sbjct: 86  SQFK-SFDIY--DAQRDQGICDDCQWE 109

[Close]

BLAST of MS002480 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.8 bits (164), Expect = 6.5e-12
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 4   VDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNAN 63
           V I N L  G TL +HCKS DDDLG+  LA    + + FR ++ GTTLF+C+   P  + 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 64  ASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDG 97
             F++Y DD+   +   +  N   CIW     G
Sbjct: 99  -RFDIYDDDRDGVRSHISCIN---CIWDISIQG 127

The following BLAST results are available for this feature:

BLAST of MS002480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143641.1	1.1e-66	99.12	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143694.1	1.1e-42	65.18	S-protein homolog 1-like [Momordica charantia]	[more]
XP_004292390.1	5.7e-42	66.67	PREDICTED: uncharacterized protein LOC101314627 [Fragaria vesca subsp. vesca]	[more]
XP_022152463.1	1.6e-41	66.07	S-protein homolog 1-like [Momordica charantia]	[more]
XP_024200376.1	3.4e-39	61.95	S-protein homolog 74 [Rosa chinensis] >PRQ31789.1 putative plant self-incompatib...	[more]

BLAST of MS002480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.4e-30	49.56	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.7e-29	46.90	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN92	1.4e-11	39.58	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F4JLQ5	1.8e-11	33.63	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F2Q9V4	1.8e-11	33.67	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of MS002480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQW3	5.5e-67	99.12	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1	[more]
A0A6J1CQ33	5.5e-43	65.18	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1	[more]
A0A6J1DEX4	8.0e-42	66.07	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1	[more]
A0A2P6QC93	1.7e-39	61.95	S-protein homolog OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0039321 PE=3 SV=1	[more]
A0A6J1L199	2.8e-39	61.95	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1	[more]

BLAST of MS002480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	9.7e-32	49.56	S-protein homologue 1	[more]
AT4G29035.1	4.1e-30	46.90	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.3e-12	33.63	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	5.0e-12	39.08	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	6.5e-12	38.71	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 4..113 e-value: 3.1E-29 score: 101.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 2..113
None	No IPR available	PANTHER	PTHR31232:SF60	SUBFAMILY NOT NAMED	coord: 2..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002480.1	MS002480.1	mRNA