MS002429 (gene) Bitter gourd (TR) v1

Overview


Name	MS002429
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	membrane protein of ER body 2-like isoform X1
Location	scaffold318: 10064 .. 10537 (-)
RNA-Seq Expression	MS002429
Synteny	MS002429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCAGATCTTTGGATGAACAAGCAACAAACTGGATCGCATGAATCAAATGACGAAAACGATGAACAGTATGAAGAATTATTTGGAGATCGAAAAAATTATCGTCTCCATTTCACAACGGCTATGTTATCATTCGTATTTTTTGGCTTGGTACCTCCTCTTGTTTATGGCTTCACGTTTCGCAACCCTGAGGACAAAAATCTCAAGATCCCAACAGTTACAATAGCTGCTGTTTTATGCATTGCATTACTTGGTGCGATTAAAGCTTACATTGGGAGACAAAACAACTGTGTTGGATATATCAATACCATTGGCAAATGTATTGTTGATGCAATAGGCACAGCAATTCTTACAACTATTGGAGGTGACATAATTGGAAATTACATTGACCAACTTGGTTGGTTTGAACCAAATAAAATACCAACCTTGTTCCTCCCCAGCATGAGTTTTCACAATCGTACCCGTGGAGCCTTT

mRNA sequence

ATATCAGATCTTTGGATGAACAAGCAACAAACTGGATCGCATGAATCAAATGACGAAAACGATGAACAGTATGAAGAATTATTTGGAGATCGAAAAAATTATCGTCTCCATTTCACAACGGCTATGTTATCATTCGTATTTTTTGGCTTGGTACCTCCTCTTGTTTATGGCTTCACGTTTCGCAACCCTGAGGACAAAAATCTCAAGATCCCAACAGTTACAATAGCTGCTGTTTTATGCATTGCATTACTTGGTGCGATTAAAGCTTACATTGGGAGACAAAACAACTGTGTTGGATATATCAATACCATTGGCAAATGTATTGTTGATGCAATAGGCACAGCAATTCTTACAACTATTGGAGGTGACATAATTGGAAATTACATTGACCAACTTGGTTGGTTTGAACCAAATAAAATACCAACCTTGTTCCTCCCCAGCATGAGTTTTCACAATCGTACCCGTGGAGCCTTT

Coding sequence (CDS)

ATATCAGATCTTTGGATGAACAAGCAACAAACTGGATCGCATGAATCAAATGACGAAAACGATGAACAGTATGAAGAATTATTTGGAGATCGAAAAAATTATCGTCTCCATTTCACAACGGCTATGTTATCATTCGTATTTTTTGGCTTGGTACCTCCTCTTGTTTATGGCTTCACGTTTCGCAACCCTGAGGACAAAAATCTCAAGATCCCAACAGTTACAATAGCTGCTGTTTTATGCATTGCATTACTTGGTGCGATTAAAGCTTACATTGGGAGACAAAACAACTGTGTTGGATATATCAATACCATTGGCAAATGTATTGTTGATGCAATAGGCACAGCAATTCTTACAACTATTGGAGGTGACATAATTGGAAATTACATTGACCAACTTGGTTGGTTTGAACCAAATAAAATACCAACCTTGTTCCTCCCCAGCATGAGTTTTCACAATCGTACCCGTGGAGCCTTT

Protein sequence

ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF

Homology

[Close]

BLAST of MS002429 vs. NCBI nr
Match: XP_022144855.1 (membrane protein of ER body 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTF 60
           ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFV FGLVPPLVYGFTF
Sbjct: 179 ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVSFGLVPPLVYGFTF 238

Query: 61  RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTI 120
           RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDA GTAILTTI
Sbjct: 239 RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDATGTAILTTI 298

Query: 121 GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF 159
           GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
Sbjct: 299 GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF 336

[Close]

BLAST of MS002429 vs. NCBI nr
Match: XP_038897300.1 (membrane protein of ER body-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFT 60
           IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FT
Sbjct: 252 ISELWIKNHESGTDEAEDQENSERYENVFGDRKNYRLHFGVALLSFVLFGLMPPLVYCFT 311

Query: 61  FRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTT 120
           F  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV ++N IG C+VDA+GT++LTT
Sbjct: 312 FCKPEDKILKVPTVTIVVVLCIALLGVAKAYIERKTNCVEFVNIIGNCVVDALGTSVLTT 371

Query: 121 IGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT 155
           IGG++I NYID+ GWF+PNKIPTLF P  SF N T
Sbjct: 372 IGGELIENYIDKAGWFDPNKIPTLFQPGFSFENGT 406

[Close]

BLAST of MS002429 vs. NCBI nr
Match: XP_038897301.1 (membrane protein of ER body-like protein isoform X2 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFT 60
           IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FT
Sbjct: 234 ISELWIKNHESGTDEAEDQENSERYENVFGDRKNYRLHFGVALLSFVLFGLMPPLVYCFT 293

Query: 61  FRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTT 120
           F  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV ++N IG C+VDA+GT++LTT
Sbjct: 294 FCKPEDKILKVPTVTIVVVLCIALLGVAKAYIERKTNCVEFVNIIGNCVVDALGTSVLTT 353

Query: 121 IGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT 155
           IGG++I NYID+ GWF+PNKIPTLF P  SF N T
Sbjct: 354 IGGELIENYIDKAGWFDPNKIPTLFQPGFSFENGT 388

[Close]

BLAST of MS002429 vs. NCBI nr
Match: XP_038897303.1 (uncharacterized protein LOC120085412 isoform X4 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFT 60
           IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FT
Sbjct: 225 ISELWIKNHESGTDEAEDQENSERYENVFGDRKNYRLHFGVALLSFVLFGLMPPLVYCFT 284

Query: 61  FRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTT 120
           F  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV ++N IG C+VDA+GT++LTT
Sbjct: 285 FCKPEDKILKVPTVTIVVVLCIALLGVAKAYIERKTNCVEFVNIIGNCVVDALGTSVLTT 344

Query: 121 IGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT 155
           IGG++I NYID+ GWF+PNKIPTLF P  SF N T
Sbjct: 345 IGGELIENYIDKAGWFDPNKIPTLFQPGFSFENGT 379

[Close]

BLAST of MS002429 vs. NCBI nr
Match: XP_038897302.1 (membrane protein of ER body 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFT 60
           IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FT
Sbjct: 229 ISELWIKNHESGTDEAEDQENSERYENVFGDRKNYRLHFGVALLSFVLFGLMPPLVYCFT 288

Query: 61  FRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTT 120
           F  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV ++N IG C+VDA+GT++LTT
Sbjct: 289 FCKPEDKILKVPTVTIVVVLCIALLGVAKAYIERKTNCVEFVNIIGNCVVDALGTSVLTT 348

Query: 121 IGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT 155
           IGG++I NYID+ GWF+PNKIPTLF P  SF N T
Sbjct: 349 IGGELIENYIDKAGWFDPNKIPTLFQPGFSFENGT 383

[Close]

BLAST of MS002429 vs. ExPASy Swiss-Prot
Match: F4KFS7 (Membrane protein of ER body 2 OS=Arabidopsis thaliana OX=3702 GN=MEB2 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 44/121 (36.36%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 16  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTI 75
           S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V +
Sbjct: 403 SSDQEKDRYEELLGRRTKSRIHILVAVMSYIFFGLIPPLVYAFSFYETGIKNYKLISVFL 462

Query: 76  AAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQ 133
            +++C+ LLG+IK Y+ +  N  G    Y+ +        + +  ++ + GDI+G YI++
Sbjct: 463 GSLVCVILLGSIKVYVRKPTNSCGSTKAYLKSAAYYTSIVVASCGISYVVGDIMGEYIEK 522

[Close]

BLAST of MS002429 vs. ExPASy Swiss-Prot
Match: Q8W4P8 (Membrane protein of ER body 1 OS=Arabidopsis thaliana OX=3702 GN=MEB1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14
Identity = 43/134 (32.09%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 8   KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPE 67
           ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   
Sbjct: 473 RKQTNTDDSPEEGEGEEDRYEEVLGRREYSRIHRVIAISSFVIFGLIPPLVYGFSFRKKM 532

Query: 68  DK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTIGG 127
           +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ T+ +    A   +  +   G
Sbjct: 533 EKRQEYKVLAVYAVSLLCIVLLSIAKAYVSKKRD---YVKTLFRYTTTATTASGFSQFVG 592

Query: 128 DIIGNYIDQLGWFE 137
            ++  ++++ G+++
Sbjct: 593 YLVSQWLEKSGFYD 603

[Close]

BLAST of MS002429 vs. ExPASy Swiss-Prot
Match: Q8LPT3 (Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0


Query: 18  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAA 77
           +E + +Y+ L G R+N+ LH T A+LSF+  G++PP+VY F+F    +K+ K+ +V  A+
Sbjct: 618 EEEEGRYKRLLGRRENFTLHATVAILSFIITGILPPVVYYFSFSEKHNKDYKVASVFGAS 677

Query: 78  VLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGTAILTTIGGDIIGNYIDQL-- 137
           + CI LL   KA++        Y+ +I   G   V   G +        ++GN+++QL  
Sbjct: 678 LFCIVLLAIAKAHVRYPRG--SYLKSILYYGSIAVSVSGISY-------VVGNFLEQLLE 737

Query: 138 --GWFEPNKIPTLFLPSMSFHNRTRG 157
             GW + ++ P   +   S   R  G
Sbjct: 738 KHGWSDGSETPVGQMMLSSLMGRKAG 754

[Close]

BLAST of MS002429 vs. ExPASy TrEMBL
Match: A0A6J1CSU1 (membrane protein of ER body 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014436 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.1e-85
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTF 60
           ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFV FGLVPPLVYGFTF
Sbjct: 179 ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVSFGLVPPLVYGFTF 238

Query: 61  RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTI 120
           RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDA GTAILTTI
Sbjct: 239 RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDATGTAILTTI 298

Query: 121 GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF 159
           GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
Sbjct: 299 GGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF 336

[Close]

BLAST of MS002429 vs. ExPASy TrEMBL
Match: A0A6J1JX70 (membrane protein of ER body 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488291 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45
Identity = 89/144 (61.81%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTF 60
           IS  W + Q++G  E  +E  ++YE++FGDRKNYRLH T A+LSF+ FGLVPPL+YGFTF
Sbjct: 226 ISKHWKSGQESGPDEQREEEVDRYEQVFGDRKNYRLHLTVAILSFLIFGLVPPLLYGFTF 285

Query: 61  RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTI 120
           R PEDK LKIPTVTI +VLCI LLG  KAYI +  NC+ Y++ IG CI DAIGT+ +TT+
Sbjct: 286 RKPEDKFLKIPTVTIVSVLCIGLLGVGKAYIEKPENCLVYVHIIGGCIADAIGTSAVTTL 345

Query: 121 GGDIIGNYIDQLGW--FEPNKIPT 143
           GG++I NY+D+ GW  FEPNK+PT
Sbjct: 346 GGELIQNYVDRAGWFDFEPNKVPT 369

[Close]

BLAST of MS002429 vs. ExPASy TrEMBL
Match: A0A6J1JXX6 (membrane protein of ER body-like protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488504 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTF 60
           IS L  NK +   +E  +   + YEE  GDR++Y LHFT AMLSF+ FGL+PPLVYGF+F
Sbjct: 326 ISGLKSNKLKKEPNERGEAKVDSYEEALGDRQHYLLHFTIAMLSFLIFGLLPPLVYGFSF 385

Query: 61  RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTI 120
           RN +D +LK+  V  +++LCIALL   KAY  R  N   Y  T+   I    G + L+ +
Sbjct: 386 RNTDDGDLKLAAVAASSLLCIALLAIAKAYAQRARNWQAYAKTLVYYITLGFGASGLSYL 445

Query: 121 GGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA 158
            G      ++Q GWF+ + + PTL LP+M F   T G+
Sbjct: 446 AGKEFDKLLEQFGWFKGDPLPPTLSLPNMDFATPTWGS 483

[Close]

BLAST of MS002429 vs. ExPASy TrEMBL
Match: A0A6J1JNK9 (membrane protein of ER body 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488504 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTF 60
           IS L  NK +   +E  +   + YEE  GDR++Y LHFT AMLSF+ FGL+PPLVYGF+F
Sbjct: 329 ISGLKSNKLKKEPNERGEAKVDSYEEALGDRQHYLLHFTIAMLSFLIFGLLPPLVYGFSF 388

Query: 61  RNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTI 120
           RN +D +LK+  V  +++LCIALL   KAY  R  N   Y  T+   I    G + L+ +
Sbjct: 389 RNTDDGDLKLAAVAASSLLCIALLAIAKAYAQRARNWQAYAKTLVYYITLGFGASGLSYL 448

Query: 121 GGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA 158
            G      ++Q GWF+ + + PTL LP+M F   T G+
Sbjct: 449 AGKEFDKLLEQFGWFKGDPLPPTLSLPNMDFATPTWGS 486

[Close]

BLAST of MS002429 vs. ExPASy TrEMBL
Match: A0A0A0K8E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352500 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.9e-26
Identity = 67/159 (42.14%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 1   ISDLWMNKQQTGSHESNDEND-EQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFT 60
           +S L  N+ +  S++S+D    + YEE  GDR +Y LHFTTA+LSF+ FGL+PPLVYGF+
Sbjct: 367 LSGLKSNQLKKESNQSDDRAQVDPYEEALGDRHHYLLHFTTAVLSFLIFGLLPPLVYGFS 426

Query: 61  FRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTT 120
           FR+ +D +LK+  V  +++LCIALL   KAY+ + NN   Y  T+   +    G + L+ 
Sbjct: 427 FRDTDDGDLKLAAVAASSLLCIALLAIAKAYVQKANNWKEYAKTLVYYVTLGFGASGLSY 486

Query: 121 IGGDIIGNYIDQLGWFEPNK-IPTLFLPSMSFHNRTRGA 158
           + G  +   ++QLGWF+ ++ +PTL LP+M     T G+
Sbjct: 487 LAGKEVNILLEQLGWFKKDQSVPTLLLPNMDLAKPTWGS 525

[Close]

BLAST of MS002429 vs. TAIR 10
Match: AT5G24290.2 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 44/121 (36.36%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 16  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTI 75
           S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V +
Sbjct: 387 SSDQEKDRYEELLGRRTKSRIHILVAVMSYIFFGLIPPLVYAFSFYETGIKNYKLISVFL 446

Query: 76  AAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQ 133
            +++C+ LLG+IK Y+ +  N  G    Y+ +        + +  ++ + GDI+G YI++
Sbjct: 447 GSLVCVILLGSIKVYVRKPTNSCGSTKAYLKSAAYYTSIVVASCGISYVVGDIMGEYIEK 506

[Close]

BLAST of MS002429 vs. TAIR 10
Match: AT5G24290.1 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 44/121 (36.36%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 16  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTI 75
           S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V +
Sbjct: 403 SSDQEKDRYEELLGRRTKSRIHILVAVMSYIFFGLIPPLVYAFSFYETGIKNYKLISVFL 462

Query: 76  AAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQ 133
            +++C+ LLG+IK Y+ +  N  G    Y+ +        + +  ++ + GDI+G YI++
Sbjct: 463 GSLVCVILLGSIKVYVRKPTNSCGSTKAYLKSAAYYTSIVVASCGISYVVGDIMGEYIEK 522

[Close]

BLAST of MS002429 vs. TAIR 10
Match: AT4G27860.1 (vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15
Identity = 43/134 (32.09%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 8   KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPE 67
           ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   
Sbjct: 473 RKQTNTDDSPEEGEGEEDRYEEVLGRREYSRIHRVIAISSFVIFGLIPPLVYGFSFRKKM 532

Query: 68  DK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTIGG 127
           +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ T+ +    A   +  +   G
Sbjct: 533 EKRQEYKVLAVYAVSLLCIVLLSIAKAYVSKKRD---YVKTLFRYTTTATTASGFSQFVG 592

Query: 128 DIIGNYIDQLGWFE 137
            ++  ++++ G+++
Sbjct: 593 YLVSQWLEKSGFYD 603

[Close]

BLAST of MS002429 vs. TAIR 10
Match: AT4G27860.2 (vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15
Identity = 43/134 (32.09%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 8   KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPE 67
           ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   
Sbjct: 458 RKQTNTDDSPEEGEGEEDRYEEVLGRREYSRIHRVIAISSFVIFGLIPPLVYGFSFRKKM 517

Query: 68  DK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVDAIGTAILTTIGG 127
           +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ T+ +    A   +  +   G
Sbjct: 518 EKRQEYKVLAVYAVSLLCIVLLSIAKAYVSKKRD---YVKTLFRYTTTATTASGFSQFVG 577

Query: 128 DIIGNYIDQLGWFE 137
            ++  ++++ G+++
Sbjct: 578 YLVSQWLEKSGFYD 588

[Close]

BLAST of MS002429 vs. TAIR 10
Match: AT4G27870.1 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0


Query: 18  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAA 77
           +E + +Y+ L G R+N+ LH T A+LSF+  G++PP+VY F+F    +K+ K+ +V  A+
Sbjct: 618 EEEEGRYKRLLGRRENFTLHATVAILSFIITGILPPVVYYFSFSEKHNKDYKVASVFGAS 677

Query: 78  VLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGTAILTTIGGDIIGNYIDQL-- 137
           + CI LL   KA++        Y+ +I   G   V   G +        ++GN+++QL  
Sbjct: 678 LFCIVLLAIAKAHVRYPRG--SYLKSILYYGSIAVSVSGISY-------VVGNFLEQLLE 737

Query: 138 --GWFEPNKIPTLFLPSMSFHNRTRG 157
             GW + ++ P   +   S   R  G
Sbjct: 738 KHGWSDGSETPVGQMMLSSLMGRKAG 754

The following BLAST results are available for this feature:

BLAST of MS002429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144855.1	1.7e-84	98.73	membrane protein of ER body 2-like isoform X1 [Momordica charantia]	[more]
XP_038897300.1	3.4e-53	65.81	membrane protein of ER body-like protein isoform X1 [Benincasa hispida]	[more]
XP_038897301.1	3.4e-53	65.81	membrane protein of ER body-like protein isoform X2 [Benincasa hispida]	[more]
XP_038897303.1	3.4e-53	65.81	uncharacterized protein LOC120085412 isoform X4 [Benincasa hispida]	[more]
XP_038897302.1	3.4e-53	65.81	membrane protein of ER body 1-like isoform X3 [Benincasa hispida]	[more]

BLAST of MS002429 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KFS7	4.8e-18	36.36	Membrane protein of ER body 2 OS=Arabidopsis thaliana OX=3702 GN=MEB2 PE=1 SV=1	[more]
Q8W4P8	4.2e-14	32.09	Membrane protein of ER body 1 OS=Arabidopsis thaliana OX=3702 GN=MEB1 PE=1 SV=1	[more]
Q8LPT3	4.7e-13	30.82	Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL...	[more]

BLAST of MS002429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSU1	8.1e-85	98.73	membrane protein of ER body 2-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1JX70	6.3e-45	61.81	membrane protein of ER body 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488291 P...	[more]
A0A6J1JXX6	2.2e-26	43.67	membrane protein of ER body-like protein isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1JNK9	2.2e-26	43.67	membrane protein of ER body 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0K8E6	2.9e-26	42.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352500 PE=3 SV=1	[more]

BLAST of MS002429 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24290.2	3.4e-19	36.36	Vacuolar iron transporter (VIT) family protein	[more]
AT5G24290.1	3.4e-19	36.36	Vacuolar iron transporter (VIT) family protein	[more]
AT4G27860.1	3.0e-15	32.09	vacuolar iron transporter (VIT) family protein	[more]
AT4G27860.2	3.0e-15	32.09	vacuolar iron transporter (VIT) family protein	[more]
AT4G27870.1	3.3e-14	30.82	Vacuolar iron transporter (VIT) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31851:SF64	GLYCINE-RICH PROTEIN FAMILY	coord: 4..152
IPR008217	Ccc1 family	PANTHER	PTHR31851	FE(2+)/MN(2+) TRANSPORTER PCL1	coord: 4..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002429.1	MS002429.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030026	cellular manganese ion homeostasis
molecular_function	GO:0005384	manganese ion transmembrane transporter activity