MELO3C035733.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035733.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionANK_REP_REGION domain-containing protein
Locationchr12: 24064634 .. 24065919 (+)
RNA-Seq ExpressionMELO3C035733.jh1
SyntenyMELO3C035733.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACTGCAAAGTAAGATATAGATTAGGGTGCAATCATATCAGTACTAATGCATTGGATATCCCATAACTCCACAATTATGCATGGATGAGAGTAATATTAAATTAGGTGACTATTTGAAAAATACGAACCACTCCTTTGAAGATATATATTAATTTAAAAGTGAAACAATCACATGGGGCTTTTTCTCTTTAGCCCACTATGAAAAGTGGAGCTACAGTCCCATGGTCCCATCTATCTAGTCAATATCAGCTCAATTTTGTTTTAATTACTTCAGAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGGTAAAAATTATTTCAAGTACTCCTTTTTTATCTACTTCTCACTTCTTTATCTTTTCTAATTCTTACATTAAAAAGCGTTCTCTGTTCATCATCAAAATAAAAAAGTAGTCCAGCTTTTAAGCTTTTTTTTCTTTTTAATGATTATATTATGTTGTTCATTTTTTTATTTAATCTTATTTAAGAAATATTATTTCTTTTTCGATTTGGTGCACTTGTTGGGTTAAAATAATTGTTGCAAAAATGTCATGGCGCGGTCTCCATATCACTCAAGAACGTTGCCACCCCCTATATCAAATGGAGACTAAACGTCACATGATATTTGGACGAAACACCTGAAAAATGATGACAAAAAAAAAATTAACCAGTGGTAATAGTGCTAGAGGTCGCATAACTAGGTGAGCAAACGCACAAAGACATCACAACTAAGTTAACAAATCGGACATTCAACCATTATTTATAACTTAATTTTCCTAAATCAAAAACTAAAATAATCCCAATGTTCATCAAATGGAGGCTAAACTCATTGAATGAGGAGAGAATTAATGAGTTTATAATAACAATATATGCATTTATGGGTGTGTGTACATAATTATTGCATATGATATGATAATTTCAGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

mRNA sequence

ATGGAGTACTGCAAAAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

Coding sequence (CDS)

ATGGAGTACTGCAAAAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

Protein sequence

MEYCKSEKSRSRREIKIKKRMRKSKSLPSIIPNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGSPTN
Homology
[Close]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match: XP_011652476.2 (uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus])

HSP 1 Score: 178 bits (451), Expect = 4.47e-51
Identity = 101/129 (78.29%), Postives = 110/129 (85.27%), Query Frame = 0 

Query: 7   EKSRSRREIKIKKRMRKSKSLPSIIPNYNSLFEESEDELT--LHTAWNRLAA-MFND-TH 66
           EKSRSRR +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  H
Sbjct: 19  EKSRSRR-MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAH 78

Query: 67  LETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKE 126
           LET A D D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E
Sbjct: 79  LETHAKDADEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRE 138

Query: 127 IILHIAAGS 131
            ILHIAAG+
Sbjct: 139 TILHIAAGA 145

[Close]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match: XP_011652468.2 (uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus])

HSP 1 Score: 178 bits (451), Expect = 1.49e-49
Identity = 101/129 (78.29%), Postives = 110/129 (85.27%), Query Frame = 0 

Query: 7   EKSRSRREIKIKKRMRKSKSLPSIIPNYNSLFEESEDELT--LHTAWNRLAA-MFND-TH 66
           EKSRSRR +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  H
Sbjct: 19  EKSRSRR-MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAH 78

Query: 67  LETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKE 126
           LET A D D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E
Sbjct: 79  LETHAKDADEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRE 138

Query: 127 IILHIAAGS 131
            ILHIAAG+
Sbjct: 139 TILHIAAGA 145

[Close]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match: KGN64473.1 (hypothetical protein Csa_013828 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 1.58e-47
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0 

Query: 15  IKIKKRMRKSKSLPSIIPNYNSLFEESEDELT--LHTAWNRLAA-MFND-THLETQAIDT 74
           +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D 
Sbjct: 1   MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDA 60

Query: 75  DQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAG 131
           D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E ILHIAAG
Sbjct: 61  DEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRETILHIAAG 120

[Close]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match: XP_004145199.1 (uncharacterized protein LOC101215460 [Cucumis sativus] >KAE8652646.1 hypothetical protein Csa_013219 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 7.91e-10
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y     ESE     H + N      + T +    +D+D    ++       + R+ LY
Sbjct: 18  PSYTVDDAESEPTSAAHLS-NCTTQEISRTIVSDYELDSDPMEKNR----AETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  EL+L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAELVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match: XP_008440631.1 (PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo] >TYJ99316.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 5.07e-09
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 18  PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LRT6 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 7.64e-48
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0 

Query: 15  IKIKKRMRKSKSLPSIIPNYNSLFEESEDELT--LHTAWNRLAA-MFND-THLETQAIDT 74
           +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D 
Sbjct: 1   MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDA 60

Query: 75  DQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAG 131
           D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E ILHIAAG
Sbjct: 61  DEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRETILHIAAG 120

[Close]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LRD1 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G058100 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.32e-10
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y     ESE     H + N      + T +    +D+D    ++       + R+ LY
Sbjct: 18  PSYTVDDAESEPTSAAHLS-NCTTQEISRTIVSDYELDSDPMEKNR----AETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  EL+L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAELVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BJN3 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005300 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.46e-09
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 18  PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B146 (uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484989 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.46e-09
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 18  PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ULD5 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002320 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.62e-09
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 692 PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 751

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 131
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 752 KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 786

The following BLAST results are available for this feature:
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652476.24.47e-5178.29uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus][more]
XP_011652468.21.49e-4978.29uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus][more]
KGN64473.11.58e-4777.69hypothetical protein Csa_013828 [Cucumis sativus][more]
XP_004145199.17.91e-1037.00uncharacterized protein LOC101215460 [Cucumis sativus] >KAE8652646.1 hypothetica... [more]
XP_008440631.15.07e-0935.00PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo] >TYJ99... [more]
BLAST of MELO3C035733.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRT67.64e-4877.69ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G058... [more]
A0A0A0LRD11.32e-1037.00ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G058... [more]
A0A5D3BJN32.46e-0935.00Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3B1462.46e-0935.00uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7ULD52.62e-0935.00Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C035733.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035733.jh1.t1MELO3C035733.jh1.t1mRNA