MELO3C035576 (gene) Melon (DHL92) v4

Overview
NameMELO3C035576
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 10633102 .. 10634171 (-)
RNA-Seq ExpressionMELO3C035576
SyntenyMELO3C035576
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCTCGCCACACGTAACTATCCTCTCCATTCGCTTGCAGCCGGATACTCATTGCCGCATGCAAAAAAAGGCTTCTACTCGTGTCGTTCTTTCTAGTTAGCCCTCGCACTGCCAGTAAGGAGCTTTTGAAGTCTCTCTCTTTTATTCCCCACCATCATTCTCTTGTTTTACTTATTATAGTTGAAATATTGTATTTGGAATGATTGTAGTTATTCTTATCAATAAGAAAACCCGGCAAAATGGAATGGACAACAAAATAGAGTAGCTAGGAGATTTAAGTTTGTATCTTTCTCACTCATTTCCTCCTTTATTTTCCTGCAGCATTTTATGTTTTCTTGTCTTGCAATGAAATTCTTCTTTGTGGGATTTTGGTGCTTTTGCTTCTCATTTTTTATTACTTTTGCTACTGTACCCCAATATTAGTTAAGGGTGGATAATTGAAGCATTTCTAGGTATTGTTATAGTTATTGTTAAATTTTTATCTATAAAGGTTTTAGAAGGGTTATTCATGAGTTATCTTGCCACGTTTTTCCTGCAAATTGTATCCTCCTGCTTGTTTCGACTATGTTTGCATTTATATAGGGAGGAGTTTGCATATGAATTGGTATAGGGTGGCGATTTCATACGCACTAGCTTAGCATAATTTAAAATACTGTAGTATTGTAGTTGAAATGTTGTATTTGGAAATGACAATTCTTTTCAAGGTAATTGTTGTAACTAATGTAGCTTGGAAATGTTGTATTTGGAAATGATAGCTCTTCTCAGTTTCTATATAAGTGAGAGATTAGAACACTGAAAATTTATACACCAAGAACGGTTGTCTTCTCTGCAAAGGAATTGAGTTATAGAGTTCTAAGTATGATGCCACTCAAATATTTCATCACATAGTTTGACAATCTAAAATGATAATTGCTGCTCATTCCATTCTTCTATATATTTATTAATTTTTATTATCTTCCTCTACAGATACCAACATGAATCTTGAGCTTGGAAGTGGAATTCTGATTTTTGTTTCAATTTCAAATGAGCATTCAGCTTCTGGAAGCTTAATTGAGAATGCAATATAA

mRNA sequence

ATGCTCCTCGCCACACGTAACTATCCTCTCCATTCGCTTGCAGCCGGATACTCATTGCCGCATGCAAAAAAAGGCTTCTACTCGTGTCATACCAACATGAATCTTGAGCTTGGAAGTGGAATTCTGATTTTTGTTTCAATTTCAAATGAGCATTCAGCTTCTGGAAGCTTAATTGAGAATGCAATATAA

Coding sequence (CDS)

ATGCTCCTCGCCACACGTAACTATCCTCTCCATTCGCTTGCAGCCGGATACTCATTGCCGCATGCAAAAAAAGGCTTCTACTCGTGTCATACCAACATGAATCTTGAGCTTGGAAGTGGAATTCTGATTTTTGTTTCAATTTCAAATGAGCATTCAGCTTCTGGAAGCTTAATTGAGAATGCAATATAA

Protein sequence

MLLATRNYPLHSLAAGYSLPHAKKGFYSCHTNMNLELGSGILIFVSISNEHSASGSLIENAI
Homology
[Close]
BLAST of MELO3C035576 vs. NCBI nr
Match: KAG7023836.1 (psuG [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 29  CHTNMNLELGSGILIFVSISNEHSASGSLIENAI 63
           CH NMNL LGSGILI V I  EHSASGSLIENAI
Sbjct: 241 CHANMNLGLGSGILISVPIPKEHSASGSLIENAI 274

[Close]
BLAST of MELO3C035576 vs. NCBI nr
Match: XP_031736108.1 (uncharacterized protein LOC101217190 isoform X2 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 7.4e-04
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 32  NMNLELGSGILIFVSISNEHSASGSLIENAI 63
           NMNLELGSG+LI V I NEHSASGSLIENAI
Sbjct: 184 NMNLELGSGVLIAVPIPNEHSASGSLIENAI 214

[Close]
BLAST of MELO3C035576 vs. NCBI nr
Match: XP_004139051.1 (uncharacterized protein LOC101217190 isoform X1 [Cucumis sativus] >XP_011660154.1 uncharacterized protein LOC101217190 isoform X1 [Cucumis sativus] >KGN66518.1 hypothetical protein Csa_007314 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 7.4e-04
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 32  NMNLELGSGILIFVSISNEHSASGSLIENAI 63
           NMNLELGSG+LI V I NEHSASGSLIENAI
Sbjct: 252 NMNLELGSGVLIAVPIPNEHSASGSLIENAI 282

[Close]
BLAST of MELO3C035576 vs. ExPASy TrEMBL
Match: A0A0A0LXQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616850 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 32  NMNLELGSGILIFVSISNEHSASGSLIENAI 63
           NMNLELGSG+LI V I NEHSASGSLIENAI
Sbjct: 252 NMNLELGSGVLIAVPIPNEHSASGSLIENAI 282

The following BLAST results are available for this feature:
BLAST of MELO3C035576 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035576 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023836.12.0e-0482.35psuG [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_031736108.17.4e-0487.10uncharacterized protein LOC101217190 isoform X2 [Cucumis sativus][more]
XP_004139051.17.4e-0487.10uncharacterized protein LOC101217190 isoform X1 [Cucumis sativus] >XP_011660154.... [more]
BLAST of MELO3C035576 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXQ43.6e-0487.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616850 PE=3 SV=1[more]
BLAST of MELO3C035576 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035576.1MELO3C035576.1mRNA